Experiment set32IT028 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS04770 +1.8 2.6 D-alanine--D-alanine ligase compare
BWI76_RS05570 +1.4 2.5 hypothetical protein compare
BWI76_RS15215 +1.1 2.2 N-acetyltransferase compare
BWI76_RS26095 +1.0 2.1 shikimate kinase compare
BWI76_RS12465 +1.0 1.8 phage shock protein D compare
BWI76_RS07985 +1.0 1.6 fluoride ion transporter CrcB compare
BWI76_RS21980 +0.9 2.9 hypothetical protein compare
BWI76_RS23340 +0.9 1.8 transcriptional regulator compare
BWI76_RS13785 +0.9 0.9 ABC transporter permease compare
BWI76_RS14065 +0.9 2.0 hypothetical protein compare
BWI76_RS10060 +0.8 1.9 acylphosphatase compare
BWI76_RS23560 +0.8 3.4 hypothetical protein compare
BWI76_RS00710 +0.8 2.0 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS04605 +0.8 1.6 thiamine ABC transporter ATP-binding protein compare
BWI76_RS04060 +0.8 3.1 hypothetical protein compare
BWI76_RS04715 +0.8 1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS19450 +0.8 2.9 hypothetical protein compare
BWI76_RS01565 +0.8 2.0 NADH pyrophosphatase compare
BWI76_RS05015 +0.8 1.7 transcriptional regulator compare
BWI76_RS07820 +0.8 2.1 S-methyl-5-thioribose kinase compare
BWI76_RS17720 +0.8 0.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05045 +0.8 3.1 general secretion pathway protein GspM compare
BWI76_RS16000 +0.8 1.6 multidrug transporter subunit MdtI compare
BWI76_RS10465 +0.8 2.9 hypothetical protein compare
BWI76_RS18770 +0.8 1.2 DNA gyrase inhibitor compare
BWI76_RS23900 +0.8 2.7 hypothetical protein compare
BWI76_RS09450 +0.8 2.1 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS12420 +0.7 1.5 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS01540 +0.7 1.7 thiamine biosynthesis protein ThiS compare
BWI76_RS27425 +0.7 1.1 DNA-directed RNA polymerase subunit omega compare
BWI76_RS15450 +0.7 2.9 hypothetical protein compare
BWI76_RS21140 +0.7 1.8 molecular chaperone HscA compare
BWI76_RS24945 +0.7 1.3 glutamine amidotransferase compare
BWI76_RS11335 +0.7 1.4 tautomerase compare
BWI76_RS19495 +0.7 1.2 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS11010 +0.7 1.7 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS19480 +0.7 2.2 transcriptional regulator compare
BWI76_RS16470 +0.7 1.6 transcriptional repressor NemR compare
BWI76_RS00355 +0.7 1.0 DNA polymerase I compare
BWI76_RS08595 +0.7 2.2 hypothetical protein compare
BWI76_RS00790 +0.7 4.4 bifunctional aspartokinase II/homoserine dehydrogenase II compare
BWI76_RS14040 +0.7 0.8 thiaminase compare
BWI76_RS09195 +0.7 1.9 N-acetyltransferase compare
BWI76_RS27395 +0.7 2.3 hypothetical protein compare
BWI76_RS06075 +0.7 2.5 taurine transporter subunit compare
BWI76_RS21290 +0.7 2.4 DNA-binding transcriptional regulator compare
BWI76_RS13030 +0.6 3.1 site-specific recombinase, phage integrase family protein compare
BWI76_RS00865 +0.6 4.1 DNA-binding transcriptional regulator OxyR compare
BWI76_RS07970 +0.6 2.0 hypothetical protein compare
BWI76_RS05990 +0.6 2.7 branched-chain amino acid ABC transporter permease compare
BWI76_RS10730 +0.6 2.7 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS02690 +0.6 2.1 hypothetical protein compare
BWI76_RS26405 +0.6 1.2 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS16895 +0.6 1.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS09255 +0.6 0.9 hypothetical protein compare
BWI76_RS27820 +0.6 0.7 ilvB operon leader peptide IvbL compare
BWI76_RS02225 +0.6 1.7 phosphonate C-P lyase system protein PhnG compare
BWI76_RS00760 +0.6 1.1 cell division protein FtsN compare
BWI76_RS22270 +0.6 2.0 nickel transporter compare
BWI76_RS24390 +0.6 1.8 hypothetical protein compare
BWI76_RS16290 +0.6 1.7 Mal regulon transcriptional regulator MalI compare
BWI76_RS04140 +0.6 1.9 phosphopentomutase compare
BWI76_RS00380 +0.6 3.8 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS15190 +0.6 3.8 GGDEF domain-containing protein compare
BWI76_RS16120 +0.6 1.4 4-carboxymuconolactone decarboxylase compare
BWI76_RS22375 +0.6 1.1 pectin acetylesterase compare
BWI76_RS09315 +0.6 1.8 hypothetical protein compare
BWI76_RS23970 +0.6 1.3 mechanosensitive ion channel protein MscS compare
BWI76_RS09625 +0.6 1.2 hypothetical protein compare
BWI76_RS01385 +0.6 1.5 potassium transporter compare
BWI76_RS15035 +0.6 0.7 metal ABC transporter permease compare
BWI76_RS11430 +0.6 0.9 lipoprotein compare
BWI76_RS24380 +0.6 2.0 esterase YqiA compare
BWI76_RS06810 +0.6 1.5 hypothetical protein compare
BWI76_RS10645 +0.5 2.8 phytanoyl-CoA dioxygenase compare
BWI76_RS20940 +0.5 1.5 uracil/xanthine transporter compare
BWI76_RS18920 +0.5 1.4 ATP phosphoribosyltransferase compare
BWI76_RS20145 +0.5 1.0 NADH-quinone oxidoreductase subunit K compare
BWI76_RS08215 +0.5 2.1 glucosamine-6-phosphate deaminase compare
BWI76_RS03665 +0.5 0.8 ABC transporter ATP-binding protein compare
BWI76_RS15095 +0.5 2.4 isochorismatase compare
BWI76_RS11890 +0.5 2.4 glycosyl hydrolase compare
BWI76_RS27780 +0.5 1.3 hypothetical protein compare
BWI76_RS16880 +0.5 1.6 GlpE family protein compare
BWI76_RS11365 +0.5 1.5 iron ABC transporter compare
BWI76_RS11150 +0.5 1.3 membrane protein compare
BWI76_RS05070 +0.5 1.4 type II secretion system protein GspH compare
BWI76_RS09905 +0.5 2.2 FMN reductase (NADPH) compare
BWI76_RS06250 +0.5 0.9 alpha-glycosidase compare
BWI76_RS16395 +0.5 2.1 glutathione S-transferase compare
BWI76_RS07640 +0.5 1.5 short chain dehydrogenase compare
BWI76_RS06785 +0.5 2.2 DNA-binding transcriptional repressor AcrR compare
BWI76_RS16815 +0.5 1.6 periplasmic binding protein compare
BWI76_RS12750 +0.5 1.9 hypothetical protein compare
BWI76_RS23895 +0.5 0.5 Xaa-Pro aminopeptidase compare
BWI76_RS27610 +0.5 1.4 hydroxyacid dehydrogenase compare
BWI76_RS26270 +0.5 2.4 N-acetyltransferase compare
BWI76_RS21345 +0.5 1.4 sigma-E factor regulatory protein RseB compare
BWI76_RS27735 +0.5 1.2 hypothetical protein compare
BWI76_RS17805 +0.5 0.9 membrane protein compare
BWI76_RS16095 +0.5 1.1 thiamine biosynthesis protein ApbE compare
BWI76_RS14800 +0.5 2.7 non-heme chloroperoxidase compare
BWI76_RS02090 +0.5 1.2 membrane protein compare
BWI76_RS18430 +0.5 1.5 hypothetical protein compare
BWI76_RS18385 +0.5 0.8 hypothetical protein compare
BWI76_RS14925 +0.5 1.5 ABC transporter substrate-binding protein compare
BWI76_RS16075 +0.5 1.0 oxidoreductase compare
BWI76_RS19605 +0.5 1.3 CidB/LrgB family autolysis modulator compare
BWI76_RS04700 +0.5 1.3 acetolactate synthase small subunit compare
BWI76_RS10615 +0.5 2.2 chorismate mutase compare
BWI76_RS18780 +0.5 1.2 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS26410 +0.5 0.8 membrane protein compare
BWI76_RS21185 +0.5 2.0 hypothetical protein compare
BWI76_RS22335 +0.5 2.9 4Fe-4S ferredoxin compare
BWI76_RS10805 +0.5 2.6 hypothetical protein compare
BWI76_RS23705 +0.5 1.5 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS08380 +0.5 0.4 endonuclease VIII compare
BWI76_RS13360 +0.5 2.3 benzoate transporter compare
BWI76_RS17675 +0.5 0.9 hypothetical protein compare
BWI76_RS06895 +0.5 2.2 biopolymer transporter ExbB compare
BWI76_RS21490 +0.5 3.6 GGDEF domain-containing protein compare
BWI76_RS00970 +0.5 1.3 branched chain amino acid aminotransferase compare
BWI76_RS05950 +0.5 1.2 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS17310 +0.5 2.4 AsnC family transcriptional regulator compare
BWI76_RS26965 +0.5 2.2 hypothetical protein compare
BWI76_RS06865 +0.5 2.2 bifunctional UDP-sugar hydrolase/5'-nucleotidase compare
BWI76_RS24960 +0.5 2.0 N-acetyltransferase compare
BWI76_RS07760 +0.5 1.0 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS13135 +0.5 1.5 3-oxoadipyl-CoA thiolase compare
BWI76_RS16920 +0.5 1.3 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS01900 +0.5 2.9 tRNA-dihydrouridine synthase A compare
BWI76_RS16315 +0.5 0.9 SirA-like protein compare
BWI76_RS15790 +0.5 1.8 replication protein compare
BWI76_RS11940 +0.5 2.1 aconitate hydratase 1 compare
BWI76_RS07780 +0.4 0.8 hypothetical protein compare
BWI76_RS15210 +0.4 1.6 LysR family transcriptional regulator compare
BWI76_RS27430 +0.4 0.4 (p)ppGpp synthetase compare
BWI76_RS09515 +0.4 1.3 arginine ABC transporter substrate-binding protein compare
BWI76_RS02685 +0.4 1.6 opacity-associated protein compare
BWI76_RS06910 +0.4 0.9 transcriptional regulator compare
BWI76_RS10560 +0.4 1.2 gamma-glutamyltransferase compare
BWI76_RS09115 +0.4 1.4 30S ribosomal protein S12 methylthiotransferase RimO compare
BWI76_RS05810 +0.4 0.8 hypothetical protein compare
BWI76_RS07460 +0.4 1.4 hypothetical protein compare
BWI76_RS12480 +0.4 1.6 TIGR01620 family protein compare
BWI76_RS06745 +0.4 1.0 N-acetyltransferase GCN5 compare
BWI76_RS23780 +0.4 2.4 aromatic acid decarboxylase compare
BWI76_RS02255 +0.4 1.3 chaperone-modulator protein CbpM compare
BWI76_RS21465 +0.4 2.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11840 +0.4 1.3 tryptophan synthase subunit alpha compare
BWI76_RS13070 +0.4 2.0 hypothetical protein compare
BWI76_RS18575 +0.4 0.9 transcriptional regulator compare
BWI76_RS09105 +0.4 2.6 glutathione ABC transporter permease GsiC compare
BWI76_RS20230 +0.4 1.0 hypothetical protein compare
BWI76_RS24070 +0.4 1.3 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS04600 +0.4 1.9 inner membrane protein compare
BWI76_RS01515 +0.4 1.7 PTS family cellobiose transporter subunit IIA compare
BWI76_RS26805 +0.4 1.1 cellulose biosynthesis protein BcsF compare
BWI76_RS12485 +0.4 2.1 TyrR family transcriptional regulator compare
BWI76_RS12670 +0.4 1.1 DNA polymerase V subunit UmuD compare
BWI76_RS13105 +0.4 2.4 phenylacetate-CoA oxygenase subunit PaaJ compare
BWI76_RS08645 +0.4 1.1 molybdate ABC transporter substrate-binding protein compare
BWI76_RS14865 +0.4 1.3 ribose ABC transporter permease compare
BWI76_RS15195 +0.4 1.2 DUF4186 domain-containing protein compare
BWI76_RS24955 +0.4 1.2 hypothetical protein compare
BWI76_RS14915 +0.4 1.0 hypothetical protein compare
BWI76_RS18060 +0.4 2.4 hypothetical protein compare
BWI76_RS11755 +0.4 1.5 catalase HPII compare
BWI76_RS15845 +0.4 0.7 hypothetical protein compare
BWI76_RS15330 +0.4 1.6 urea ABC transporter permease subunit UrtC compare
BWI76_RS15740 +0.4 1.1 HNH endonuclease compare
BWI76_RS23680 +0.4 1.1 ribokinase compare
BWI76_RS22280 +0.4 2.6 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS00995 +0.4 1.6 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS12885 +0.4 1.3 hypothetical protein compare
BWI76_RS04995 +0.4 1.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
BWI76_RS16970 +0.4 3.2 murein L,D-transpeptidase compare
BWI76_RS18815 +0.4 1.5 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS23470 +0.4 3.3 hypothetical protein compare
BWI76_RS26285 +0.4 1.4 glycerophosphodiester phosphodiesterase compare
BWI76_RS11400 +0.4 1.6 SAM-dependent methyltransferase compare
BWI76_RS04305 +0.4 0.5 molecular chaperone DnaJ compare
BWI76_RS23505 +0.4 3.4 ferrous iron transporter B compare
BWI76_RS06060 +0.4 1.2 DNA-binding response regulator compare
BWI76_RS16080 +0.4 1.2 LysR family transcriptional regulator compare
BWI76_RS04850 +0.4 2.5 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS16355 +0.4 1.0 electron transport complex subunit A compare
BWI76_RS16195 +0.4 0.8 hypothetical protein compare
BWI76_RS00120 +0.4 1.1 glucosamine-6-phosphate deaminase compare
BWI76_RS06205 +0.4 1.9 recombination-associated protein RdgC compare
BWI76_RS12095 +0.4 2.0 hypothetical protein compare
BWI76_RS11895 +0.4 1.7 AraC family transcriptional regulator compare
BWI76_RS06565 +0.4 2.4 putative periplasmic solute-binding protein compare
BWI76_RS19600 +0.4 2.3 hypothetical protein compare
BWI76_RS04055 +0.4 3.4 GGDEF domain-containing protein compare
BWI76_RS26120 +0.4 1.7 hypothetical protein compare
BWI76_RS13090 +0.4 1.2 phenylacetate-CoA oxygenase subunit PaaA compare
BWI76_RS13745 +0.4 1.7 formate dehydrogenase subunit beta compare
BWI76_RS15130 +0.4 1.8 hypothetical protein compare
BWI76_RS17200 +0.4 0.9 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered across organisms