Experiment set32IT027 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -7.6 -3.6 tyrosine recombinase XerC compare
BWI76_RS09645 -6.9 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS19040 -5.8 -6.9 hypothetical protein compare
BWI76_RS04510 -5.3 -2.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -5.3 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS04470 -4.9 -11.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS04465 -4.9 -8.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -4.8 -9.5 aspartate carbamoyltransferase compare
BWI76_RS10990 -4.8 -4.9 dihydroorotase compare
BWI76_RS15825 -4.4 -4.0 hypothetical protein compare
BWI76_RS15110 -3.9 -13.1 putative excinuclease ABC subunit A compare
BWI76_RS00345 -3.7 -3.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS21450 -3.6 -2.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09660 -3.5 -2.1 DNA translocase FtsK compare
BWI76_RS23480 -3.4 -12.2 EAL domain-containing protein compare
BWI76_RS16965 -3.4 -2.9 murein lipoprotein compare
BWI76_RS23265 -3.3 -4.7 hypothetical protein compare
BWI76_RS15225 -3.3 -2.6 DeoR family transcriptional regulator compare
BWI76_RS23240 -3.3 -3.2 exonuclease V subunit gamma compare
BWI76_RS09910 -3.3 -16.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS02530 -3.1 -3.2 tRNA dimethylallyltransferase compare
BWI76_RS06525 -3.1 -5.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS15850 -3.0 -1.5 DUF1317 domain-containing protein compare
BWI76_RS00600 -3.0 -10.7 LacI family transcriptional regulator compare
BWI76_RS15115 -2.9 -4.5 MFS transporter compare
BWI76_RS19035 -2.9 -6.3 dTDP-rhamnosyl transferase compare
BWI76_RS15840 -2.7 -3.3 prophage protein compare
BWI76_RS13915 -2.7 -6.0 magnesium transport protein MgtC compare
BWI76_RS08120 -2.6 -5.1 cobalt transporter compare
BWI76_RS19050 -2.6 -8.6 NAD(P)-dependent oxidoreductase compare
BWI76_RS01630 -2.6 -1.2 16S ribosomal RNA compare
BWI76_RS09640 -2.6 -3.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS19060 -2.6 -14.3 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS26570 -2.5 -3.1 anion permease compare
BWI76_RS06530 -2.5 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS20650 -2.5 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS20155 -2.5 -1.4 NADH-quinone oxidoreductase subunit I compare
BWI76_RS08520 -2.5 -2.1 colicin transporter TolQ compare
BWI76_RS15830 -2.5 -2.7 hypothetical protein compare
BWI76_RS21675 -2.4 -1.7 hypothetical protein compare
BWI76_RS27385 -2.4 -5.0 orotate phosphoribosyltransferase compare
BWI76_RS13920 -2.3 -4.8 magnesium-translocating P-type ATPase compare
BWI76_RS23230 -2.3 -2.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS08385 -2.3 -2.1 citrate (Si)-synthase compare
BWI76_RS15835 -2.2 -1.8 hypothetical protein compare
BWI76_RS19055 -2.1 -6.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS05120 -2.1 -8.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS05200 -2.1 -2.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS25920 -2.1 -1.5 peptidylprolyl isomerase compare
BWI76_RS21310 -2.1 -1.4 DNA repair protein RecO compare
BWI76_RS07070 -2.0 -3.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04530 -1.9 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS15860 -1.9 -2.3 adenine-specific DNA methyltransferase compare
BWI76_RS04305 -1.9 -0.9 molecular chaperone DnaJ compare
BWI76_RS25065 -1.9 -2.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS01330 -1.9 -4.3 twin-arginine translocase subunit TatC compare
BWI76_RS26460 -1.9 -4.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS04955 -1.8 -1.6 hypoxanthine phosphoribosyltransferase compare
BWI76_RS01325 -1.8 -2.1 twin-arginine translocase subunit TatB compare
BWI76_RS15660 -1.8 -1.2 hypothetical protein compare
BWI76_RS12240 -1.8 -7.5 terminase small subunit compare
BWI76_RS12090 -1.7 -1.3 HNH endonuclease compare
BWI76_RS18240 -1.7 -1.8 L-arabinose ABC transporter permease AraH compare
BWI76_RS18715 -1.7 -5.1 hypothetical protein compare
BWI76_RS08530 -1.7 -1.6 protein TolA compare
BWI76_RS01200 -1.7 -1.6 diaminopimelate epimerase compare
BWI76_RS09635 -1.7 -1.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS11965 -1.7 -4.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01870 -1.7 -5.6 diacylglycerol kinase compare
BWI76_RS26775 -1.7 -2.8 endo-1,4-D-glucanase compare
BWI76_RS09190 -1.7 -2.5 hypothetical protein compare
BWI76_RS27390 -1.6 -4.5 ribonuclease PH compare
BWI76_RS21370 -1.6 -1.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS24280 -1.6 -3.5 biopolymer transporter ExbB compare
BWI76_RS19865 -1.5 -2.1 ecotin compare
BWI76_RS00400 -1.5 -0.7 glutamine synthetase compare
BWI76_RS18710 -1.5 -8.0 GGDEF-domain containing protein compare
BWI76_RS15195 -1.5 -1.9 DUF4186 domain-containing protein compare
BWI76_RS08535 -1.5 -1.7 translocation protein TolB compare
BWI76_RS02725 -1.5 -1.1 HxlR family transcriptional regulator compare
BWI76_RS24025 -1.4 -4.3 agmatinase compare
BWI76_RS12170 -1.4 -1.8 hypothetical protein compare
BWI76_RS12040 -1.4 -1.3 hypothetical protein compare
BWI76_RS19845 -1.4 -3.9 phosphatase compare
BWI76_RS24275 -1.4 -2.8 biopolymer transport protein ExbD compare
BWI76_RS09730 -1.4 -1.3 pyruvate formate lyase 1-activating protein compare
BWI76_RS12245 -1.4 -6.2 hypothetical protein compare
BWI76_RS20380 -1.4 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS26455 -1.4 -2.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS19070 -1.4 -7.0 rhamnosyltransferase compare
BWI76_RS20350 -1.3 -2.9 amidophosphoribosyltransferase compare
BWI76_RS01220 -1.3 -4.6 DNA-dependent helicase II compare
BWI76_RS14770 -1.3 -1.3 PTS IIA 2 domain protein compare
BWI76_RS19045 -1.3 -5.8 capsular polysaccharide biosynthesis protein compare
BWI76_RS03835 -1.3 -2.4 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS00265 -1.3 -5.8 potassium transporter Kup compare
BWI76_RS12255 -1.3 -8.0 hypothetical protein compare
BWI76_RS07095 -1.3 -2.7 ribosome-associated protein compare
BWI76_RS19700 -1.3 -1.6 deoxyribonuclease IV compare
BWI76_RS26075 -1.2 -2.3 DNA adenine methylase compare
BWI76_RS10900 -1.2 -2.7 putative oxidoreductase compare
BWI76_RS12185 -1.2 -2.0 hypothetical protein compare
BWI76_RS13820 -1.2 -1.2 hypothetical protein compare
BWI76_RS11155 -1.2 -1.1 penicillin-binding protein activator LpoB compare
BWI76_RS17190 -1.2 -2.1 TonB system transport protein TonB compare
BWI76_RS06800 -1.2 -1.0 DUF2496 domain-containing protein compare
BWI76_RS16675 -1.2 -1.6 ABC transporter compare
BWI76_RS26590 -1.2 -1.7 transcriptional regulator compare
BWI76_RS06770 -1.2 -4.7 Hha toxicity attenuator compare
BWI76_RS04705 -1.2 -3.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS00390 -1.2 -4.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS15990 -1.2 -2.4 serine protease compare
BWI76_RS15620 -1.1 -1.6 hypothetical protein compare
BWI76_RS15215 -1.1 -0.9 N-acetyltransferase compare
BWI76_RS13595 -1.1 -2.5 transcriptional regulator compare
BWI76_RS07740 -1.1 -1.2 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS22755 -1.1 -3.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20895 -1.1 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS06400 -1.1 -1.5 oxidative-stress-resistance chaperone compare
BWI76_RS01890 -1.1 -2.1 transcriptional regulator Zur compare
BWI76_RS11200 -1.1 -2.2 transpeptidase compare
BWI76_RS05355 -1.1 -2.0 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS20135 -1.1 -2.5 NADH-quinone oxidoreductase subunit M compare
BWI76_RS19905 -1.1 -2.5 OmpK36 porin compare
BWI76_RS16375 -1.1 -1.4 electron transport complex subunit G compare
BWI76_RS20375 -1.1 -1.2 membrane protein compare
BWI76_RS12215 -1.1 -3.0 HNH endonuclease compare
BWI76_RS15670 -1.1 -4.1 hypothetical protein compare
BWI76_RS19450 -1.0 -1.8 hypothetical protein compare
BWI76_RS27440 -1.0 -1.8 DNA helicase RecG compare
BWI76_RS24340 -1.0 -4.0 two-component sensor histidine kinase compare
BWI76_RS17570 -1.0 -1.6 iron-sulfur-binding protein compare
BWI76_RS12330 -1.0 -2.9 hypothetical protein compare
BWI76_RS05880 -1.0 -1.1 AraC-type DNA-binding domain-containing protein compare
BWI76_RS01610 -1.0 -4.0 phosphoribosylamine--glycine ligase compare
BWI76_RS21395 -1.0 -1.4 DTW domain-containing protein compare
BWI76_RS01205 -1.0 -2.0 DUF484 family protein compare
BWI76_RS14835 -1.0 -1.0 hypothetical protein compare
BWI76_RS21000 -1.0 -2.5 exopolyphosphatase compare
BWI76_RS20430 -1.0 -2.1 penicillin-insensitive murein endopeptidase compare
BWI76_RS09615 -1.0 -1.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS05835 -1.0 -2.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS22850 -1.0 -1.6 tRNA pseudouridine synthase TruC compare
BWI76_RS26325 -1.0 -2.8 altronate hydrolase compare
BWI76_RS11135 -1.0 -2.9 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS04515 -1.0 -0.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS26425 -1.0 -4.9 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS10575 -1.0 -1.1 polar amino acid ABC transporter permease compare
BWI76_RS23020 -1.0 -0.9 cobalamin biosynthesis protein CbiQ compare
BWI76_RS12250 -1.0 -5.5 terminase compare
BWI76_RS02815 -1.0 -1.0 fructose-bisphosphatase class I compare
BWI76_RS12270 -1.0 -2.1 hypothetical protein compare
BWI76_RS23515 -0.9 -1.5 antibiotic biosynthesis monooxygenase compare
BWI76_RS13435 -0.9 -1.1 hypothetical protein compare
BWI76_RS12265 -0.9 -4.8 hypothetical protein compare
BWI76_RS06015 -0.9 -1.1 hypothetical protein compare
BWI76_RS01110 -0.9 -2.5 TDP-fucosamine acetyltransferase compare
BWI76_RS15690 -0.9 -2.1 hypothetical protein compare
BWI76_RS26200 -0.9 -2.7 starch synthase compare
BWI76_RS07865 -0.9 -1.4 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS04270 -0.9 -2.2 transaldolase compare
BWI76_RS07185 -0.9 -1.2 hypothetical protein compare
BWI76_RS06735 -0.9 -1.3 50S ribosomal protein L31 compare
BWI76_RS20970 -0.9 -1.1 phosphoribosylglycinamide formyltransferase compare
BWI76_RS01615 -0.9 -3.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07780 -0.9 -0.8 hypothetical protein compare
BWI76_RS14075 -0.9 -1.2 TetR family transcriptional regulator compare
BWI76_RS14390 -0.9 -1.5 hypothetical protein compare
BWI76_RS26045 -0.9 -1.7 nitrite reductase small subunit compare
BWI76_RS14305 -0.9 -2.3 metallophosphoesterase compare
BWI76_RS18200 -0.9 -3.7 copper homeostasis protein CutC compare
BWI76_RS12360 -0.9 -4.1 hypothetical protein compare
BWI76_RS17370 -0.9 -1.4 nitrate transporter NasD compare
BWI76_RS03180 -0.9 -1.7 phage transcriptional regulator, AlpA compare
BWI76_RS00875 -0.9 -2.6 DNA-binding transcriptional regulator FabR compare
BWI76_RS21580 -0.9 -0.9 SsrA-binding protein compare
BWI76_RS12465 -0.9 -0.7 phage shock protein D compare
BWI76_RS07380 -0.9 -1.5 hypothetical protein compare
BWI76_RS09960 -0.9 -1.1 Lon protease compare
BWI76_RS12200 -0.9 -2.3 hypothetical protein compare
BWI76_RS12210 -0.9 -4.1 hypothetical protein compare
BWI76_RS12220 -0.9 -4.7 hypothetical protein compare
BWI76_RS05130 -0.9 -2.8 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS21390 -0.9 -2.0 thiol disulfide reductase thioredoxin compare
BWI76_RS01095 -0.9 -1.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS19330 -0.8 -0.8 HAD family hydrolase compare
BWI76_RS12295 -0.8 -4.2 hypothetical protein compare
BWI76_RS27165 -0.8 -1.8 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS21265 -0.8 -4.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS12410 -0.8 -3.6 hypothetical protein compare
BWI76_RS02990 -0.8 -1.5 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS12205 -0.8 -1.2 hypothetical protein compare
BWI76_RS05125 -0.8 -4.4 ferrichrome porin FhuA compare
BWI76_RS16090 -0.8 -1.3 two-component system response regulator DcuR compare
BWI76_RS12515 -0.8 -1.2 protease compare
BWI76_RS25220 -0.8 -1.0 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS23185 -0.8 -1.4 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS24115 -0.8 -3.0 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS11430 -0.8 -0.6 lipoprotein compare
BWI76_RS02220 -0.8 -2.0 carbon-phosphorus lyase subunit PhnH compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered across organisms