Experiment set32IT027 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS04770 +2.0 2.3 D-alanine--D-alanine ligase compare
BWI76_RS00180 +1.6 0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS00295 +1.6 8.7 transcriptional regulator RbsR compare
BWI76_RS11255 +1.4 2.4 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS20360 +1.3 1.9 cell division protein DedD compare
BWI76_RS26395 +1.3 6.2 cell division protein FtsE compare
BWI76_RS08375 +1.2 3.8 pyroglutamyl-peptidase I compare
BWI76_RS18605 +1.2 2.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS08210 +1.1 2.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS00760 +1.1 1.9 cell division protein FtsN compare
BWI76_RS25070 +1.1 1.7 hypothetical protein compare
BWI76_RS20795 +1.1 1.5 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS00795 +1.1 1.2 carboxymuconolactone decarboxylase compare
BWI76_RS18770 +1.1 1.4 DNA gyrase inhibitor compare
BWI76_RS16000 +1.1 1.9 multidrug transporter subunit MdtI compare
BWI76_RS26390 +1.1 5.2 cell division protein FtsX compare
BWI76_RS17675 +1.1 1.1 hypothetical protein compare
BWI76_RS26095 +1.1 1.1 shikimate kinase compare
BWI76_RS13785 +1.0 1.6 ABC transporter permease compare
BWI76_RS05015 +1.0 2.6 transcriptional regulator compare
BWI76_RS13250 +1.0 1.8 cytochrome b561 compare
BWI76_RS03105 +1.0 1.3 myo-inosose-2 dehydratase compare
BWI76_RS12585 +1.0 2.0 transcriptional regulator compare
BWI76_RS05570 +1.0 1.2 hypothetical protein compare
BWI76_RS09110 +1.0 1.8 glutathione ABC transporter permease GsiD compare
BWI76_RS06465 +1.0 2.3 IclR family transcriptional regulator compare
BWI76_RS02180 +1.0 1.1 hypothetical protein compare
BWI76_RS07820 +0.9 2.1 S-methyl-5-thioribose kinase compare
BWI76_RS07730 +0.9 1.6 iron-enterobactin transporter membrane protein compare
BWI76_RS02655 +0.9 2.2 hypothetical protein compare
BWI76_RS10035 +0.9 1.6 hypothetical protein compare
BWI76_RS08885 +0.9 3.1 transcriptional regulator compare
BWI76_RS23120 +0.9 1.6 propanediol dehydratase medium subunit compare
BWI76_RS15210 +0.9 2.4 LysR family transcriptional regulator compare
BWI76_RS09970 +0.9 1.8 porin OmpA compare
BWI76_RS20720 +0.9 1.0 hypothetical protein compare
BWI76_RS16805 +0.9 1.9 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS04645 +0.9 4.1 3-dehydroquinase compare
BWI76_RS12485 +0.9 2.7 TyrR family transcriptional regulator compare
BWI76_RS05790 +0.9 1.6 phage DNA-binding protein compare
BWI76_RS15920 +0.9 1.6 hypothetical protein compare
BWI76_RS19980 +0.9 2.0 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS01545 +0.9 1.6 thiamine biosynthesis protein ThiS compare
BWI76_RS03665 +0.8 0.8 ABC transporter ATP-binding protein compare
BWI76_RS09765 +0.8 2.1 metalloprotease compare
BWI76_RS03025 +0.8 1.9 N-acetyltransferase compare
BWI76_RS11700 +0.8 1.3 hypothetical protein compare
BWI76_RS09145 +0.8 2.6 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS06560 +0.8 1.5 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS24585 +0.8 2.0 glycerol dehydrogenase compare
BWI76_RS12895 +0.8 2.0 hypothetical protein compare
BWI76_RS10755 +0.8 1.3 pyrimidine utilization flavin reductase protein F compare
BWI76_RS09410 +0.8 3.6 reverse transcriptase compare
BWI76_RS00140 +0.8 0.8 phosphate transport system regulator PhoU compare
BWI76_RS23255 +0.8 1.6 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS09760 +0.8 2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS12670 +0.8 2.1 DNA polymerase V subunit UmuD compare
BWI76_RS02685 +0.8 2.8 opacity-associated protein compare
BWI76_RS13095 +0.8 1.2 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS19755 +0.8 3.1 fructuronate reductase compare
BWI76_RS11675 +0.8 2.4 arginine N-succinyltransferase compare
BWI76_RS15260 +0.8 1.5 hypothetical protein compare
BWI76_RS23340 +0.8 2.0 transcriptional regulator compare
BWI76_RS13425 +0.7 3.4 1-pyrroline dehydrogenase compare
BWI76_RS19650 +0.7 2.0 DNA-binding transcriptional regulator GalS compare
BWI76_RS12420 +0.7 1.0 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS00715 +0.7 2.0 two-component sensor histidine kinase compare
BWI76_RS18915 +0.7 1.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS16120 +0.7 2.5 4-carboxymuconolactone decarboxylase compare
BWI76_RS10935 +0.7 2.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS25850 +0.7 2.3 prepilin peptidase compare
BWI76_RS27395 +0.7 2.0 hypothetical protein compare
BWI76_RS21740 +0.7 2.1 transcriptional regulator, LysR family protein compare
BWI76_RS22085 +0.7 2.3 L-valine transporter subunit YgaH compare
BWI76_RS20145 +0.7 1.1 NADH-quinone oxidoreductase subunit K compare
BWI76_RS10930 +0.7 3.5 glucan biosynthesis protein G compare
BWI76_RS17935 +0.7 1.5 DUF2627 domain-containing protein compare
BWI76_RS12885 +0.7 1.6 hypothetical protein compare
BWI76_RS16260 +0.7 1.7 two-component sensor histidine kinase compare
BWI76_RS18070 +0.7 2.3 DNA polymerase III subunit epsilon compare
BWI76_RS15435 +0.7 1.2 hypothetical protein compare
BWI76_RS26270 +0.7 1.9 N-acetyltransferase compare
BWI76_RS18335 +0.7 2.9 DNA-binding response regulator compare
BWI76_RS06250 +0.7 2.3 alpha-glycosidase compare
BWI76_RS09015 +0.7 2.8 aldo/keto reductase compare
BWI76_RS06325 +0.7 1.3 hypothetical protein compare
BWI76_RS13890 +0.7 1.9 LysR family transcriptional regulator compare
BWI76_RS09105 +0.7 2.9 glutathione ABC transporter permease GsiC compare
BWI76_RS12600 +0.7 2.4 MFS transporter compare
BWI76_RS13050 +0.7 1.5 transcriptional regulator compare
BWI76_RS13610 +0.7 2.0 sugar transporter compare
BWI76_RS26285 +0.7 2.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS16170 +0.7 2.7 amidohydrolase compare
BWI76_RS24725 +0.6 1.8 altronate hydrolase compare
BWI76_RS19215 +0.6 1.2 proline-specific peptidase compare
BWI76_RS20730 +0.6 1.3 hypothetical protein compare
BWI76_RS24625 +0.6 1.3 hypothetical protein compare
BWI76_RS05990 +0.6 1.8 branched-chain amino acid ABC transporter permease compare
BWI76_RS14415 +0.6 1.3 transcriptional regulator, TetR family protein compare
BWI76_RS15745 +0.6 2.1 hypothetical protein compare
BWI76_RS00565 +0.6 2.2 branched-chain amino acid transport compare
BWI76_RS16160 +0.6 1.7 LysR family transcriptional regulator compare
BWI76_RS11265 +0.6 2.0 peptidase T compare
BWI76_RS26440 +0.6 1.0 hypothetical protein compare
BWI76_RS21660 +0.6 1.2 antirestriction protein compare
BWI76_RS26830 +0.6 1.8 endoglucanase compare
BWI76_RS16140 +0.6 2.0 3-oxoadipate CoA-transferase compare
BWI76_RS04600 +0.6 1.2 inner membrane protein compare
BWI76_RS03430 +0.6 1.9 short-chain dehydrogenase compare
BWI76_RS16315 +0.6 1.0 SirA-like protein compare
BWI76_RS19585 +0.6 1.4 gentisate 1,2-dioxygenase compare
BWI76_RS25480 +0.6 2.0 ribonuclease E/G compare
BWI76_RS20335 +0.6 1.9 zinc transporter compare
BWI76_RS17390 +0.6 1.4 DsrE family protein compare
BWI76_RS05430 +0.6 2.7 UbiE/COQ5 family methyltransferase compare
BWI76_RS27015 +0.6 2.3 hypothetical protein compare
BWI76_RS22855 +0.6 1.8 hypothetical protein compare
BWI76_RS14265 +0.6 2.0 LysR family transcriptional regulator compare
BWI76_RS02445 +0.6 1.4 fumarate reductase subunit C compare
BWI76_RS15740 +0.6 1.5 HNH endonuclease compare
BWI76_RS11520 +0.6 0.9 hypothetical protein compare
BWI76_RS18235 +0.6 1.6 trehalose-phosphatase compare
BWI76_RS01185 +0.6 0.9 adenylate cyclase compare
BWI76_RS23710 +0.6 2.4 3-keto-2-deoxy-D-ribonyl-CoA thiolase (from data) compare
BWI76_RS05075 +0.6 0.7 type II secretion system protein GspG compare
BWI76_RS09420 +0.6 1.4 hypothetical protein compare
BWI76_RS06805 +0.6 1.8 primosomal replication protein N'' compare
BWI76_RS07760 +0.6 1.5 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS05950 +0.6 1.2 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS01235 +0.6 1.8 hypothetical protein compare
BWI76_RS00865 +0.6 2.1 DNA-binding transcriptional regulator OxyR compare
BWI76_RS20610 +0.6 2.2 LysR family transcriptional regulator compare
BWI76_RS23895 +0.6 0.4 Xaa-Pro aminopeptidase compare
BWI76_RS21115 +0.6 1.3 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS04985 +0.6 2.6 aspartate 1-decarboxylase compare
BWI76_RS09975 +0.6 1.5 cell division inhibitor SulA compare
BWI76_RS15190 +0.6 2.9 GGDEF domain-containing protein compare
BWI76_RS14840 +0.6 1.7 hypothetical protein compare
BWI76_RS07920 +0.6 2.3 methionine aminotransferase compare
BWI76_RS23015 +0.6 1.1 cobalt transporter ATP-binding subunit compare
BWI76_RS14170 +0.6 1.2 hypothetical protein compare
BWI76_RS11250 +0.6 1.5 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS06545 +0.6 1.7 peptidylprolyl isomerase compare
BWI76_RS03845 +0.6 3.4 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase compare
BWI76_RS09050 +0.6 1.3 MFS transporter compare
BWI76_RS21285 +0.6 1.0 HAD family hydrolase compare
BWI76_RS06745 +0.6 0.8 N-acetyltransferase GCN5 compare
BWI76_RS21470 +0.6 1.5 gluconolaconase compare
BWI76_RS23190 +0.6 2.1 propanediol utilization protein PduU compare
BWI76_RS15205 +0.6 1.1 succinate-semialdehyde dehydrogenase compare
BWI76_RS26520 +0.6 2.1 nickel import ATP-binding protein NikE compare
BWI76_RS11890 +0.6 3.1 glycosyl hydrolase compare
BWI76_RS07515 +0.6 1.7 glutamate--cysteine ligase compare
BWI76_RS01935 +0.6 1.3 thiamin phosphate synthase compare
BWI76_RS06440 +0.6 1.8 AP endonuclease compare
BWI76_RS15350 +0.6 0.9 hypothetical protein compare
BWI76_RS12650 +0.6 2.1 membrane protein compare
BWI76_RS15135 +0.6 2.1 hypothetical protein compare
BWI76_RS11610 +0.6 1.0 glutamate dehydrogenase compare
BWI76_RS08380 +0.6 0.6 endonuclease VIII compare
BWI76_RS00790 +0.6 3.5 bifunctional aspartokinase II/homoserine dehydrogenase II compare
BWI76_RS10365 +0.6 1.3 class IV aminotransferase compare
BWI76_RS16115 +0.6 2.0 fumarate hydratase compare
BWI76_RS13195 +0.6 1.8 glutamate dehydrogenase compare
BWI76_RS26010 +0.6 2.0 cell filamentation protein Fic compare
BWI76_RS14755 +0.6 2.1 SIS domain-containing protein compare
BWI76_RS12500 +0.6 3.2 dipeptide epimerase compare
BWI76_RS01285 +0.6 1.2 amino acid ABC transporter substrate-binding protein compare
BWI76_RS12745 +0.6 1.8 putative prophage membrane protein compare
BWI76_RS11400 +0.6 1.8 SAM-dependent methyltransferase compare
BWI76_RS05800 +0.6 1.3 phage transcriptional activator, Ogr/delta compare
BWI76_RS11815 +0.6 1.0 hypothetical protein compare
BWI76_RS01080 +0.6 2.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09535 +0.6 1.9 N-acetylmuramoyl-L-alanine amidase amid compare
BWI76_RS27605 +0.6 0.9 hypothetical protein compare
BWI76_RS08975 +0.6 1.4 amino acid ABC transporter substrate-binding protein compare
BWI76_RS16250 +0.5 2.6 DNA-binding response regulator compare
BWI76_RS11335 +0.5 0.8 tautomerase compare
BWI76_RS06435 +0.5 2.5 MFS transporter compare
BWI76_RS05465 +0.5 0.9 amidohydrolase compare
BWI76_RS09515 +0.5 1.9 arginine ABC transporter substrate-binding protein compare
BWI76_RS19480 +0.5 0.8 transcriptional regulator compare
BWI76_RS02425 +0.5 2.5 entericidin B compare
BWI76_RS15095 +0.5 1.0 isochorismatase compare
BWI76_RS10920 +0.5 1.3 putative TetR family transcriptional regulator compare
BWI76_RS17105 +0.5 3.3 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS03825 +0.5 1.4 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS07595 +0.5 0.9 putative oxidoreductase compare
BWI76_RS17185 +0.5 2.2 fructosamine kinase family protein compare
BWI76_RS25000 +0.5 0.8 malonate decarboxylase acyl carrier protein compare
BWI76_RS09445 +0.5 1.8 NADPH-dependent oxidoreductase compare
BWI76_RS16980 +0.5 2.5 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS09625 +0.5 0.8 hypothetical protein compare
BWI76_RS18655 +0.5 2.5 chaperone FimC, periplasmic compare
BWI76_RS21960 +0.5 1.8 fimbrial protein compare
BWI76_RS23000 +0.5 1.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS00115 +0.5 2.6 6-phosphogluconate phosphatase compare
BWI76_RS27450 +0.5 2.5 ferredoxin--NADP(+) reductase compare
BWI76_RS06055 +0.5 2.7 MASE1 sensor histidine kinase compare
BWI76_RS12985 +0.5 0.9 transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered across organisms