Experiment set32IT026 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS02995 -7.4 -11.2 aspartate carbamoyltransferase compare
BWI76_RS04465 -7.4 -6.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -7.3 -13.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS19040 -5.4 -8.3 hypothetical protein compare
BWI76_RS02530 -5.3 -3.6 tRNA dimethylallyltransferase compare
BWI76_RS05120 -5.0 -12.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS23265 -5.0 -5.1 hypothetical protein compare
BWI76_RS15825 -4.9 -4.9 hypothetical protein compare
BWI76_RS15110 -4.9 -17.8 putative excinuclease ABC subunit A compare
BWI76_RS15115 -4.3 -5.1 MFS transporter compare
BWI76_RS26455 -4.2 -4.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09645 -4.2 -3.2 thioredoxin-disulfide reductase compare
BWI76_RS19010 -4.2 -4.1 polysaccharide pyruvyl transferase yvff compare
BWI76_RS09910 -4.1 -18.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS06525 -3.7 -7.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01325 -3.7 -4.0 twin-arginine translocase subunit TatB compare
BWI76_RS10990 -3.6 -4.7 dihydroorotase compare
BWI76_RS23240 -3.6 -2.5 exonuclease V subunit gamma compare
BWI76_RS09660 -3.5 -2.4 DNA translocase FtsK compare
BWI76_RS27385 -3.4 -11.3 orotate phosphoribosyltransferase compare
BWI76_RS19035 -3.4 -8.4 dTDP-rhamnosyl transferase compare
BWI76_RS16965 -3.3 -4.4 murein lipoprotein compare
BWI76_RS11155 -3.1 -5.3 penicillin-binding protein activator LpoB compare
BWI76_RS13915 -3.0 -8.0 magnesium transport protein MgtC compare
BWI76_RS15225 -2.9 -2.2 DeoR family transcriptional regulator compare
BWI76_RS00600 -2.8 -10.4 LacI family transcriptional regulator compare
BWI76_RS11965 -2.8 -5.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01210 -2.8 -2.4 tyrosine recombinase XerC compare
BWI76_RS26460 -2.7 -6.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS19050 -2.7 -10.3 NAD(P)-dependent oxidoreductase compare
BWI76_RS15840 -2.7 -2.8 prophage protein compare
BWI76_RS01200 -2.7 -2.6 diaminopimelate epimerase compare
BWI76_RS26075 -2.7 -4.2 DNA adenine methylase compare
BWI76_RS19060 -2.7 -18.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS26775 -2.6 -4.3 endo-1,4-D-glucanase compare
BWI76_RS12090 -2.6 -1.8 HNH endonuclease compare
BWI76_RS06530 -2.6 -6.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS26570 -2.6 -3.4 anion permease compare
BWI76_RS27390 -2.5 -5.7 ribonuclease PH compare
BWI76_RS13920 -2.5 -4.5 magnesium-translocating P-type ATPase compare
BWI76_RS01870 -2.5 -5.8 diacylglycerol kinase compare
BWI76_RS23230 -2.4 -3.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS19055 -2.3 -10.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS08120 -2.3 -7.5 cobalt transporter compare
BWI76_RS19845 -2.3 -10.2 phosphatase compare
BWI76_RS26665 -2.3 -5.2 DNA-binding response regulator compare
BWI76_RS20650 -2.1 -2.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS08530 -2.1 -2.2 protein TolA compare
BWI76_RS17190 -2.0 -3.0 TonB system transport protein TonB compare
BWI76_RS12170 -1.9 -3.5 hypothetical protein compare
BWI76_RS26670 -1.9 -11.3 two-component sensor histidine kinase compare
BWI76_RS01330 -1.9 -4.6 twin-arginine translocase subunit TatC compare
BWI76_RS02410 -1.8 -1.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS21075 -1.8 -1.8 membrane protein compare
BWI76_RS09970 -1.7 -2.6 porin OmpA compare
BWI76_RS00720 -1.7 -2.6 DNA-binding response regulator compare
BWI76_RS04510 -1.7 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01220 -1.7 -6.2 DNA-dependent helicase II compare
BWI76_RS23480 -1.7 -8.3 EAL domain-containing protein compare
BWI76_RS03105 -1.6 -1.6 myo-inosose-2 dehydratase compare
BWI76_RS15850 -1.6 -0.6 DUF1317 domain-containing protein compare
BWI76_RS19070 -1.6 -11.6 rhamnosyltransferase compare
BWI76_RS09615 -1.6 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS08535 -1.6 -1.8 translocation protein TolB compare
BWI76_RS24080 -1.6 -3.1 DUF179 domain-containing protein compare
BWI76_RS25920 -1.5 -2.4 peptidylprolyl isomerase compare
BWI76_RS15350 -1.5 -1.9 hypothetical protein compare
BWI76_RS01205 -1.5 -3.8 DUF484 family protein compare
BWI76_RS21265 -1.5 -10.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS15860 -1.5 -1.6 adenine-specific DNA methyltransferase compare
BWI76_RS12255 -1.4 -9.4 hypothetical protein compare
BWI76_RS21310 -1.4 -1.7 DNA repair protein RecO compare
BWI76_RS20355 -1.4 -3.6 colicin V production protein compare
BWI76_RS12265 -1.4 -8.8 hypothetical protein compare
BWI76_RS07070 -1.4 -4.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04715 -1.4 -1.8 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS24340 -1.4 -5.2 two-component sensor histidine kinase compare
BWI76_RS08385 -1.4 -2.7 citrate (Si)-synthase compare
BWI76_RS05200 -1.4 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS25060 -1.4 -3.4 lipoprotein NlpI compare
BWI76_RS20350 -1.4 -6.3 amidophosphoribosyltransferase compare
BWI76_RS24280 -1.4 -3.2 biopolymer transporter ExbB compare
BWI76_RS15835 -1.4 -1.0 hypothetical protein compare
BWI76_RS19770 -1.3 -2.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS19905 -1.3 -6.9 OmpK36 porin compare
BWI76_RS12245 -1.3 -8.1 hypothetical protein compare
BWI76_RS17975 -1.3 -3.7 tail-specific protease compare
BWI76_RS08275 -1.3 -2.1 LexA regulated protein compare
BWI76_RS20565 -1.3 -1.1 hypothetical protein compare
BWI76_RS21370 -1.3 -1.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS15830 -1.3 -1.6 hypothetical protein compare
BWI76_RS01610 -1.3 -6.0 phosphoribosylamine--glycine ligase compare
BWI76_RS00875 -1.2 -5.2 DNA-binding transcriptional regulator FabR compare
BWI76_RS20895 -1.2 -4.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS12240 -1.2 -5.3 terminase small subunit compare
BWI76_RS12250 -1.2 -9.1 terminase compare
BWI76_RS24025 -1.2 -6.2 agmatinase compare
BWI76_RS08525 -1.2 -1.4 colicin transporter compare
BWI76_RS01385 -1.2 -2.3 potassium transporter compare
BWI76_RS21715 -1.2 -2.7 transcriptional regulator compare
BWI76_RS12275 -1.2 -7.7 hypothetical protein compare
BWI76_RS16260 -1.2 -2.4 two-component sensor histidine kinase compare
BWI76_RS27235 -1.2 -7.1 murein hydrolase activator EnvC compare
BWI76_RS20965 -1.2 -2.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS12070 -1.2 -1.6 hypothetical protein compare
BWI76_RS12285 -1.1 -3.0 hypothetical protein compare
BWI76_RS13595 -1.1 -2.7 transcriptional regulator compare
BWI76_RS27165 -1.1 -3.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS19045 -1.1 -5.2 capsular polysaccharide biosynthesis protein compare
BWI76_RS18715 -1.1 -4.5 hypothetical protein compare
BWI76_RS18200 -1.1 -3.2 copper homeostasis protein CutC compare
BWI76_RS04525 -1.1 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS26440 -1.1 -1.5 hypothetical protein compare
BWI76_RS08520 -1.1 -1.2 colicin transporter TolQ compare
BWI76_RS26620 -1.1 -1.1 Fe-S biogenesis protein NfuA compare
BWI76_RS19840 -1.1 -1.5 hypothetical protein compare
BWI76_RS12260 -1.1 -3.7 hypothetical protein compare
BWI76_RS11135 -1.1 -4.5 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS08210 -1.1 -1.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26200 -1.1 -5.5 starch synthase compare
BWI76_RS08515 -1.0 -2.4 acyl-CoA thioesterase YbgC compare
BWI76_RS07065 -1.0 -3.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS02735 -1.0 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS08020 -1.0 -5.1 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS05135 -1.0 -3.2 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS01090 -1.0 -3.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS04530 -1.0 -1.2 peptidylprolyl isomerase SurA compare
BWI76_RS27440 -1.0 -2.4 DNA helicase RecG compare
BWI76_RS01615 -1.0 -4.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04160 -1.0 -4.0 phosphoserine phosphatase compare
BWI76_RS11150 -1.0 -1.9 membrane protein compare
BWI76_RS19330 -1.0 -1.3 HAD family hydrolase compare
BWI76_RS24275 -1.0 -2.0 biopolymer transport protein ExbD compare
BWI76_RS22650 -1.0 -3.8 lipoprotein NlpD compare
BWI76_RS18710 -1.0 -7.2 GGDEF-domain containing protein compare
BWI76_RS15680 -1.0 -4.0 hypothetical protein compare
BWI76_RS21450 -1.0 -1.0 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS17980 -1.0 -2.6 RNA chaperone ProQ compare
BWI76_RS01125 -1.0 -3.6 4-alpha-L-fucosyltransferase compare
BWI76_RS12235 -1.0 -2.9 hypothetical protein compare
BWI76_RS15015 -1.0 -1.6 DUF2132 domain-containing protein compare
BWI76_RS00390 -1.0 -4.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS08500 -0.9 -1.7 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS00345 -0.9 -2.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS09190 -0.9 -2.6 hypothetical protein compare
BWI76_RS05180 -0.9 -4.9 serine endoprotease DegQ compare
BWI76_RS05130 -0.9 -4.3 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS21250 -0.9 -4.0 two-component system response regulator GlrR compare
BWI76_RS02815 -0.9 -1.3 fructose-bisphosphatase class I compare
BWI76_RS17155 -0.9 -1.6 hypothetical protein compare
BWI76_RS01110 -0.9 -2.7 TDP-fucosamine acetyltransferase compare
BWI76_RS01350 -0.9 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS26425 -0.9 -5.0 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS12220 -0.9 -6.1 hypothetical protein compare
BWI76_RS12290 -0.9 -4.1 hypothetical protein compare
BWI76_RS12335 -0.9 -4.6 hypothetical protein compare
BWI76_RS06535 -0.9 -3.0 endopeptidase La compare
BWI76_RS12205 -0.9 -4.0 hypothetical protein compare
BWI76_RS12160 -0.9 -3.5 hypothetical protein compare
BWI76_RS27435 -0.9 -4.3 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS12410 -0.9 -5.8 hypothetical protein compare
BWI76_RS23125 -0.9 -2.2 propanediol dehydratase small subunit compare
BWI76_RS09755 -0.9 -3.4 phosphoserine transaminase compare
BWI76_RS12190 -0.9 -3.4 glycoside hydrolase family protein compare
BWI76_RS15990 -0.8 -4.0 serine protease compare
BWI76_RS01135 -0.8 -3.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS21375 -0.8 -1.4 autonomous glycyl radical cofactor GrcA compare
BWI76_RS24115 -0.8 -3.9 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS12270 -0.8 -4.0 hypothetical protein compare
BWI76_RS21565 -0.8 -1.0 outer membrane protein assembly factor BamE compare
BWI76_RS27305 -0.8 -3.9 glycosyl transferase compare
BWI76_RS00385 -0.8 -4.9 nitrogen assimilation regulatory protein compare
BWI76_RS18360 -0.8 -1.4 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS04705 -0.8 -3.6 DNA-binding transcriptional regulator FruR compare
BWI76_RS02725 -0.8 -1.1 HxlR family transcriptional regulator compare
BWI76_RS12340 -0.8 -2.9 molecular chaperone Tir compare
BWI76_RS12325 -0.8 -6.7 hypothetical protein compare
BWI76_RS09640 -0.8 -1.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS12215 -0.8 -4.5 HNH endonuclease compare
BWI76_RS12195 -0.8 -3.1 hypothetical protein compare
BWI76_RS08180 -0.8 -4.3 asparagine synthase B compare
BWI76_RS01080 -0.8 -4.9 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS05235 -0.8 -0.8 hypothetical protein compare
BWI76_RS12225 -0.8 -2.7 hypothetical protein compare
BWI76_RS12300 -0.8 -5.3 hypothetical protein compare
BWI76_RS12305 -0.8 -4.2 hypothetical protein compare
BWI76_RS12360 -0.8 -5.1 hypothetical protein compare
BWI76_RS09030 -0.8 -4.2 transpeptidase compare
BWI76_RS12350 -0.8 -6.0 kinase compare
BWI76_RS15630 -0.8 -1.6 hypothetical protein compare
BWI76_RS05790 -0.8 -1.3 phage DNA-binding protein compare
BWI76_RS05450 -0.8 -0.9 ribonuclease HI compare
BWI76_RS12035 -0.7 -3.0 hypothetical protein compare
BWI76_RS12320 -0.7 -4.4 hypothetical protein compare
BWI76_RS06295 -0.7 -2.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS16250 -0.7 -3.6 DNA-binding response regulator compare
BWI76_RS12345 -0.7 -2.1 nitrite transporter compare
BWI76_RS12115 -0.7 -2.4 hypothetical protein compare
BWI76_RS25280 -0.7 -1.5 RNase adaptor protein RapZ compare
BWI76_RS00265 -0.7 -4.9 potassium transporter Kup compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered across organisms