Experiment set32IT024 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

200 most important genes:

  gene name fitness t score description  
BWI76_RS09645 -6.6 -2.3 thioredoxin-disulfide reductase compare
BWI76_RS12090 -6.2 -6.1 HNH endonuclease compare
BWI76_RS06525 -6.0 -5.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS15825 -5.7 -4.0 hypothetical protein compare
BWI76_RS02530 -5.1 -3.5 tRNA dimethylallyltransferase compare
BWI76_RS02995 -5.0 -9.6 aspartate carbamoyltransferase compare
BWI76_RS04465 -4.9 -6.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS19010 -4.9 -3.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS04470 -4.8 -11.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS27440 -4.6 -6.3 DNA helicase RecG compare
BWI76_RS01210 -4.5 -2.7 tyrosine recombinase XerC compare
BWI76_RS23265 -4.5 -4.1 hypothetical protein compare
BWI76_RS10990 -4.5 -3.6 dihydroorotase compare
BWI76_RS04305 -4.3 -1.5 molecular chaperone DnaJ compare
BWI76_RS15110 -4.2 -16.2 putative excinuclease ABC subunit A compare
BWI76_RS23480 -3.9 -11.0 EAL domain-containing protein compare
BWI76_RS06530 -3.9 -7.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS19040 -3.8 -7.6 hypothetical protein compare
BWI76_RS26395 -3.7 -5.0 cell division protein FtsE compare
BWI76_RS15115 -3.7 -4.4 MFS transporter compare
BWI76_RS01330 -3.7 -4.8 twin-arginine translocase subunit TatC compare
BWI76_RS27305 -3.6 -4.2 glycosyl transferase compare
BWI76_RS19035 -3.4 -7.9 dTDP-rhamnosyl transferase compare
BWI76_RS26665 -3.3 -3.7 DNA-binding response regulator compare
BWI76_RS09660 -3.2 -2.2 DNA translocase FtsK compare
BWI76_RS20155 -3.2 -2.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS26440 -3.1 -1.8 hypothetical protein compare
BWI76_RS01325 -3.0 -2.7 twin-arginine translocase subunit TatB compare
BWI76_RS09910 -3.0 -14.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS23240 -3.0 -2.9 exonuclease V subunit gamma compare
BWI76_RS24885 -2.9 -2.4 PTS galactitol transporter subunit IIB compare
BWI76_RS15840 -2.9 -3.3 prophage protein compare
BWI76_RS19050 -2.9 -9.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS13915 -2.9 -5.1 magnesium transport protein MgtC compare
BWI76_RS08120 -2.9 -4.3 cobalt transporter compare
BWI76_RS16965 -2.8 -3.0 murein lipoprotein compare
BWI76_RS26085 -2.7 -1.6 3-dehydroquinate synthase compare
BWI76_RS05120 -2.7 -8.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS27385 -2.7 -7.2 orotate phosphoribosyltransferase compare
BWI76_RS06770 -2.6 -8.4 Hha toxicity attenuator compare
BWI76_RS16260 -2.6 -2.3 two-component sensor histidine kinase compare
BWI76_RS00600 -2.6 -8.7 LacI family transcriptional regulator compare
BWI76_RS26570 -2.6 -3.4 anion permease compare
BWI76_RS19845 -2.5 -7.1 phosphatase compare
BWI76_RS00345 -2.5 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS26460 -2.5 -3.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS15850 -2.5 -1.0 DUF1317 domain-containing protein compare
BWI76_RS27235 -2.5 -8.1 murein hydrolase activator EnvC compare
BWI76_RS26390 -2.5 -3.0 cell division protein FtsX compare
BWI76_RS23230 -2.4 -1.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS08615 -2.4 -2.7 galactokinase compare
BWI76_RS21310 -2.3 -1.6 DNA repair protein RecO compare
BWI76_RS15660 -2.3 -1.4 hypothetical protein compare
BWI76_RS04510 -2.3 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19060 -2.3 -13.1 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS08530 -2.3 -2.0 protein TolA compare
BWI76_RS13560 -2.3 -1.3 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS19055 -2.2 -6.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS15225 -2.2 -2.2 DeoR family transcriptional regulator compare
BWI76_RS12235 -2.2 -3.0 hypothetical protein compare
BWI76_RS20900 -2.2 -1.8 outer membrane protein assembly factor BamC compare
BWI76_RS26775 -2.2 -4.0 endo-1,4-D-glucanase compare
BWI76_RS24025 -2.1 -7.1 agmatinase compare
BWI76_RS26670 -2.1 -9.1 two-component sensor histidine kinase compare
BWI76_RS00965 -2.1 -1.4 acetolactate synthase 2 small subunit compare
BWI76_RS26455 -2.0 -3.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS19840 -2.0 -1.5 hypothetical protein compare
BWI76_RS09970 -2.0 -1.9 porin OmpA compare
BWI76_RS11965 -1.9 -5.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS17720 -1.9 -0.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS25920 -1.9 -1.7 peptidylprolyl isomerase compare
BWI76_RS11155 -1.9 -2.8 penicillin-binding protein activator LpoB compare
BWI76_RS25870 -1.9 -1.5 elongation factor Tu compare
BWI76_RS26075 -1.8 -2.2 DNA adenine methylase compare
BWI76_RS01220 -1.8 -4.6 DNA-dependent helicase II compare
BWI76_RS19330 -1.7 -1.3 HAD family hydrolase compare
BWI76_RS00875 -1.7 -4.2 DNA-binding transcriptional regulator FabR compare
BWI76_RS10745 -1.6 -1.2 hypothetical protein compare
BWI76_RS02735 -1.6 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS21460 -1.6 -1.5 translation inhibitor protein RaiA compare
BWI76_RS27290 -1.6 -4.9 hypothetical protein compare
BWI76_RS06765 -1.6 -1.9 transcriptional regulator compare
BWI76_RS18710 -1.6 -7.3 GGDEF-domain containing protein compare
BWI76_RS09615 -1.6 -1.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS19070 -1.5 -8.1 rhamnosyltransferase compare
BWI76_RS11780 -1.5 -2.2 2-deoxyglucose-6-phosphatase compare
BWI76_RS21565 -1.5 -1.1 outer membrane protein assembly factor BamE compare
BWI76_RS00400 -1.5 -0.8 glutamine synthetase compare
BWI76_RS01200 -1.5 -1.6 diaminopimelate epimerase compare
BWI76_RS27430 -1.5 -0.8 (p)ppGpp synthetase compare
BWI76_RS05015 -1.5 -2.1 transcriptional regulator compare
BWI76_RS13920 -1.4 -4.2 magnesium-translocating P-type ATPase compare
BWI76_RS23485 -1.4 -5.7 hypothetical protein compare
BWI76_RS15835 -1.4 -1.1 hypothetical protein compare
BWI76_RS09150 -1.4 -2.6 DNA-binding transcriptional repressor DeoR compare
BWI76_RS01870 -1.4 -3.2 diacylglycerol kinase compare
BWI76_RS27165 -1.4 -3.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS08500 -1.4 -2.4 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS05835 -1.4 -2.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS12170 -1.4 -3.6 hypothetical protein compare
BWI76_RS25220 -1.4 -2.2 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS00760 -1.4 -3.6 cell division protein FtsN compare
BWI76_RS18715 -1.4 -3.2 hypothetical protein compare
BWI76_RS19045 -1.4 -2.6 capsular polysaccharide biosynthesis protein compare
BWI76_RS24055 -1.3 -4.1 MFS transporter compare
BWI76_RS12070 -1.3 -1.2 hypothetical protein compare
BWI76_RS08525 -1.3 -1.9 colicin transporter compare
BWI76_RS02580 -1.3 -1.2 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS08495 -1.3 -2.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS15975 -1.3 -1.1 hypothetical protein compare
BWI76_RS01205 -1.3 -2.7 DUF484 family protein compare
BWI76_RS10835 -1.3 -1.2 hypothetical protein compare
BWI76_RS16355 -1.3 -2.6 electron transport complex subunit A compare
BWI76_RS08620 -1.3 -2.5 galactose-1-phosphate uridylyltransferase compare
BWI76_RS17280 -1.3 -2.6 patatin family protein compare
BWI76_RS20380 -1.2 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS12265 -1.2 -4.8 hypothetical protein compare
BWI76_RS25065 -1.2 -2.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00025 -1.2 -1.0 hypothetical protein compare
BWI76_RS12255 -1.2 -7.2 hypothetical protein compare
BWI76_RS05135 -1.2 -2.8 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS15830 -1.2 -1.6 hypothetical protein compare
BWI76_RS18695 -1.2 -3.1 GntR family transcriptional regulator compare
BWI76_RS06810 -1.2 -1.9 hypothetical protein compare
BWI76_RS16485 -1.2 -1.1 ribonuclease T compare
BWI76_RS25060 -1.2 -2.8 lipoprotein NlpI compare
BWI76_RS12245 -1.2 -6.5 hypothetical protein compare
BWI76_RS02610 -1.1 -3.3 transcriptional regulator compare
BWI76_RS19905 -1.1 -4.5 OmpK36 porin compare
BWI76_RS21165 -1.1 -1.5 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS14650 -1.1 -3.0 helix-turn-helix transcriptional regulator compare
BWI76_RS25505 -1.1 -3.5 RNase E specificity factor CsrD compare
BWI76_RS13435 -1.1 -1.3 hypothetical protein compare
BWI76_RS22755 -1.1 -3.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04770 -1.1 -3.2 D-alanine--D-alanine ligase compare
BWI76_RS11255 -1.1 -0.8 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS06535 -1.1 -2.4 endopeptidase La compare
BWI76_RS27390 -1.1 -2.8 ribonuclease PH compare
BWI76_RS11835 -1.1 -1.7 putative regulatory protein MarR compare
BWI76_RS18200 -1.1 -2.9 copper homeostasis protein CutC compare
BWI76_RS21000 -1.0 -2.8 exopolyphosphatase compare
BWI76_RS04525 -1.0 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS15060 -1.0 -2.0 MarR family transcriptional regulator compare
BWI76_RS13595 -1.0 -2.7 transcriptional regulator compare
BWI76_RS10245 -1.0 -2.2 aspartate aminotransferase compare
BWI76_RS16910 -1.0 -1.9 2-keto-4-pentenoate hydratase compare
BWI76_RS01615 -1.0 -4.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS03015 -1.0 -1.5 RNase E inhibitor protein compare
BWI76_RS25280 -1.0 -1.4 RNase adaptor protein RapZ compare
BWI76_RS12270 -1.0 -3.7 hypothetical protein compare
BWI76_RS20880 -1.0 -1.2 esterase compare
BWI76_RS00265 -1.0 -4.9 potassium transporter Kup compare
BWI76_RS13250 -1.0 -1.0 cytochrome b561 compare
BWI76_RS20230 -1.0 -1.0 hypothetical protein compare
BWI76_RS25070 -1.0 -0.9 hypothetical protein compare
BWI76_RS14320 -0.9 -1.0 hypothetical protein compare
BWI76_RS26425 -0.9 -4.9 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS24315 -0.9 -2.8 cell division protein FtsP compare
BWI76_RS12240 -0.9 -4.6 terminase small subunit compare
BWI76_RS11135 -0.9 -3.0 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS09190 -0.9 -1.8 hypothetical protein compare
BWI76_RS19920 -0.9 -3.6 hybrid sensor histidine kinase/response regulator compare
BWI76_RS22935 -0.9 -1.5 L-fucose mutarotase compare
BWI76_RS11035 -0.9 -1.8 putative LysR-family transcriptional regulator compare
BWI76_RS09730 -0.9 -0.6 pyruvate formate lyase 1-activating protein compare
BWI76_RS16895 -0.9 -1.2 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS24280 -0.9 -3.7 biopolymer transporter ExbB compare
BWI76_RS19900 -0.9 -2.2 FAD:protein FMN transferase compare
BWI76_RS26620 -0.9 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS24080 -0.9 -1.0 DUF179 domain-containing protein compare
BWI76_RS16335 -0.9 -1.1 division septum protein Blr compare
BWI76_RS10770 -0.9 -2.0 pyrimidine utilization protein C compare
BWI76_RS12590 -0.9 -1.2 helix-turn-helix-type transcriptional regulator compare
BWI76_RS01610 -0.9 -5.3 phosphoribosylamine--glycine ligase compare
BWI76_RS15990 -0.9 -2.6 serine protease compare
BWI76_RS17110 -0.9 -1.2 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS22430 -0.9 -1.2 manganese/iron transporter ATP-binding protein compare
BWI76_RS12125 -0.9 -2.2 hypothetical protein compare
BWI76_RS21690 -0.9 -1.4 hypothetical protein compare
BWI76_RS06665 -0.9 -2.1 membrane protein compare
BWI76_RS26045 -0.9 -1.7 nitrite reductase small subunit compare
BWI76_RS14520 -0.9 -2.4 hypothetical protein compare
BWI76_RS18605 -0.9 -0.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS25425 -0.9 -1.1 arginine repressor compare
BWI76_RS21870 -0.9 -3.2 hypothetical protein compare
BWI76_RS16345 -0.9 -3.5 nucleoid-associated protein compare
BWI76_RS17935 -0.9 -1.4 DUF2627 domain-containing protein compare
BWI76_RS04515 -0.9 -0.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS25545 -0.9 -1.6 hypothetical protein compare
BWI76_RS21675 -0.8 -1.0 hypothetical protein compare
BWI76_RS18140 -0.8 -1.5 zinc ABC transporter permease compare
BWI76_RS15860 -0.8 -0.9 adenine-specific DNA methyltransferase compare
BWI76_RS08260 -0.8 -1.8 LysR family transcriptional regulator compare
BWI76_RS13480 -0.8 -1.0 XRE family transcriptional regulator compare
BWI76_RS20090 -0.8 -2.2 ribonuclease Z compare
BWI76_RS12295 -0.8 -1.6 hypothetical protein compare
BWI76_RS12145 -0.8 -1.0 hypothetical protein compare
BWI76_RS18190 -0.8 -1.8 carboxy-S-adenosyl-L-methionine synthase CmoA compare
BWI76_RS06490 -0.8 -2.6 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS20885 -0.8 -2.7 tRNA(Met) cytidine acetyltransferase TmcA compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms