Experiment set32IT024 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS04530 +2.1 3.7 peptidylprolyl isomerase SurA compare
BWI76_RS19850 +1.3 5.4 tRNA-Pro compare
BWI76_RS07640 +1.2 1.1 short chain dehydrogenase compare
BWI76_RS26405 +1.2 1.8 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS21490 +1.2 9.6 GGDEF domain-containing protein compare
BWI76_RS11815 +1.1 2.6 hypothetical protein compare
BWI76_RS01125 +1.1 4.6 4-alpha-L-fucosyltransferase compare
BWI76_RS07820 +1.1 1.8 S-methyl-5-thioribose kinase compare
BWI76_RS00140 +1.1 1.4 phosphate transport system regulator PhoU compare
BWI76_RS04055 +1.1 9.5 GGDEF domain-containing protein compare
BWI76_RS27745 +1.1 2.4 PTS sugar transporter subunit IIB compare
BWI76_RS21485 +1.1 6.6 DUF4154 domain-containing protein compare
BWI76_RS01095 +1.0 2.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS07185 +1.0 1.6 hypothetical protein compare
BWI76_RS26480 +1.0 4.0 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS16315 +1.0 1.6 SirA-like protein compare
BWI76_RS07970 +1.0 2.8 hypothetical protein compare
BWI76_RS26470 +1.0 2.9 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS16330 +1.0 4.5 oxidoreductase compare
BWI76_RS00180 +1.0 0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17770 +1.0 2.6 isomerase/hydrolase compare
BWI76_RS15315 +1.0 2.2 DNA-binding protein compare
BWI76_RS16795 +1.0 2.2 amino acid ABC transporter ATPase compare
BWI76_RS03025 +1.0 2.6 N-acetyltransferase compare
BWI76_RS15015 +1.0 1.9 DUF2132 domain-containing protein compare
BWI76_RS02745 +0.9 1.7 hypothetical protein compare
BWI76_RS19865 +0.9 2.9 ecotin compare
BWI76_RS11525 +0.9 1.2 HNH endonuclease compare
BWI76_RS18335 +0.9 5.6 DNA-binding response regulator compare
BWI76_RS11750 +0.9 2.0 chitooligosaccharide deacetylase compare
BWI76_RS01195 +0.9 2.2 membrane protein compare
BWI76_RS06080 +0.9 2.8 taurine dioxygenase compare
BWI76_RS13420 +0.9 2.2 ABC transporter permease compare
BWI76_RS24925 +0.9 2.3 DnaA initiator-associating protein DiaA compare
BWI76_RS21075 +0.9 1.4 membrane protein compare
BWI76_RS09515 +0.9 1.7 arginine ABC transporter substrate-binding protein compare
BWI76_RS00865 +0.9 3.6 DNA-binding transcriptional regulator OxyR compare
BWI76_RS14065 +0.9 1.5 hypothetical protein compare
BWI76_RS19195 +0.9 2.6 nickel ABC transporter permease compare
BWI76_RS23985 +0.9 3.3 erythrose-4-phosphate dehydrogenase compare
BWI76_RS27780 +0.8 1.8 hypothetical protein compare
BWI76_RS25375 +0.8 1.9 hypothetical protein compare
BWI76_RS26785 +0.8 6.4 UDP-forming cellulose synthase catalytic subunit compare
BWI76_RS24040 +0.8 1.9 hypothetical protein compare
BWI76_RS16425 +0.8 2.2 hypothetical protein compare
BWI76_RS11150 +0.8 1.4 membrane protein compare
BWI76_RS08205 +0.8 4.0 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS18780 +0.8 1.9 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS05045 +0.8 1.9 general secretion pathway protein GspM compare
BWI76_RS06325 +0.8 2.3 hypothetical protein compare
BWI76_RS26095 +0.8 0.6 shikimate kinase compare
BWI76_RS13785 +0.8 1.9 ABC transporter permease compare
BWI76_RS06335 +0.8 2.0 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS23470 +0.8 6.0 hypothetical protein compare
BWI76_RS00560 +0.8 2.0 hypothetical protein compare
BWI76_RS03520 +0.8 7.0 diguanylate cyclase compare
BWI76_RS12485 +0.8 2.3 TyrR family transcriptional regulator compare
BWI76_RS01135 +0.8 3.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS11335 +0.8 1.2 tautomerase compare
BWI76_RS15190 +0.8 3.1 GGDEF domain-containing protein compare
BWI76_RS12865 +0.8 1.9 acetylornithine deacetylase compare
BWI76_RS09710 +0.8 2.3 transketolase compare
BWI76_RS21685 +0.8 1.3 hypothetical protein compare
BWI76_RS21110 +0.8 5.4 hypothetical protein compare
BWI76_RS05260 +0.8 1.6 chaperone compare
BWI76_RS10740 +0.8 2.0 NAD(P)H:quinone oxidoreductase compare
BWI76_RS18070 +0.8 2.3 DNA polymerase III subunit epsilon compare
BWI76_RS09625 +0.8 1.4 hypothetical protein compare
BWI76_RS13495 +0.7 1.3 hypothetical protein compare
BWI76_RS08980 +0.7 1.2 DNA starvation/stationary phase protection protein compare
BWI76_RS04425 +0.7 2.4 oxaloacetate decarboxylase subunit gamma compare
BWI76_RS16950 +0.7 1.0 TetR family transcriptional regulator compare
BWI76_RS11440 +0.7 1.1 hypothetical protein compare
BWI76_RS26800 +0.7 6.5 cellulose biosynthesis protein BcsE compare
BWI76_RS06075 +0.7 2.6 taurine transporter subunit compare
BWI76_RS02050 +0.7 1.7 CidA/LrgA family protein compare
BWI76_RS05915 +0.7 1.9 helix-turn-helix transcriptional regulator compare
BWI76_RS19495 +0.7 1.0 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS23505 +0.7 6.3 ferrous iron transporter B compare
BWI76_RS08580 +0.7 2.0 quinolinate synthetase compare
BWI76_RS01085 +0.7 3.1 polysaccharide chain length modulation protein compare
BWI76_RS16120 +0.7 2.0 4-carboxymuconolactone decarboxylase compare
BWI76_RS13625 +0.7 2.4 hypothetical protein compare
BWI76_RS04645 +0.7 2.7 3-dehydroquinase compare
BWI76_RS27865 +0.7 2.4 hypothetical protein compare
BWI76_RS16785 +0.7 2.2 peptidase M20 compare
BWI76_RS21345 +0.7 1.0 sigma-E factor regulatory protein RseB compare
BWI76_RS04060 +0.7 2.1 hypothetical protein compare
BWI76_RS12870 +0.7 1.5 putative phytanoyl-CoA dioxygenase compare
BWI76_RS24965 +0.7 1.8 SCP2 domain-containing protein compare
BWI76_RS23285 +0.7 2.2 hypothetical protein compare
BWI76_RS06780 +0.7 2.4 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS10575 +0.7 0.9 polar amino acid ABC transporter permease compare
BWI76_RS27520 +0.7 3.1 sodium/glutamate symporter compare
BWI76_RS23000 +0.7 2.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS04180 +0.7 3.6 hypothetical protein compare
BWI76_RS23030 +0.7 1.5 cobalamin biosynthesis protein CbiM compare
BWI76_RS17420 +0.7 1.3 hypothetical protein compare
BWI76_RS20795 +0.6 0.8 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS07165 +0.6 1.5 hypothetical protein compare
BWI76_RS15440 +0.6 2.3 hypothetical protein compare
BWI76_RS21140 +0.6 1.0 molecular chaperone HscA compare
BWI76_RS20440 +0.6 1.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS12735 +0.6 2.7 phage repressor protein compare
BWI76_RS15925 +0.6 1.6 dimethyl sulfoxide reductase subunit A compare
BWI76_RS26485 +0.6 4.4 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS01935 +0.6 1.4 thiamin phosphate synthase compare
BWI76_RS19480 +0.6 1.4 transcriptional regulator compare
BWI76_RS18055 +0.6 1.9 copper resistance protein D compare
BWI76_RS01620 +0.6 1.9 hypothetical protein compare
BWI76_RS19935 +0.6 1.3 hypothetical protein compare
BWI76_RS13970 +0.6 1.5 ABC transporter compare
BWI76_RS23560 +0.6 1.8 hypothetical protein compare
BWI76_RS24955 +0.6 1.0 hypothetical protein compare
BWI76_RS19550 +0.6 2.8 phospho-cellobiase compare
BWI76_RS26465 +0.6 4.1 4-amino-4-deoxy-L-arabinose lipid A transferase compare
BWI76_RS16575 +0.6 2.1 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS17500 +0.6 3.3 knotted carbamoyltransferase YgeW compare
BWI76_RS05570 +0.6 0.8 hypothetical protein compare
BWI76_RS15775 +0.6 1.6 replication protein compare
BWI76_RS07965 +0.6 2.8 anaerobic C4-dicarboxylate transporter DcuC compare
BWI76_RS26795 +0.6 4.5 hypothetical protein compare
BWI76_RS26780 +0.6 3.9 cellulose synthase regulator BcsB compare
BWI76_RS12985 +0.6 1.1 transcriptional regulator compare
BWI76_RS26285 +0.6 2.0 glycerophosphodiester phosphodiesterase compare
BWI76_RS12885 +0.6 1.4 hypothetical protein compare
BWI76_RS11060 +0.6 1.4 septum formation inhibitor Maf compare
BWI76_RS24960 +0.6 1.4 N-acetyltransferase compare
BWI76_RS00565 +0.6 1.4 branched-chain amino acid transport compare
BWI76_RS05165 +0.6 2.2 cobalamin-binding protein compare
BWI76_RS09025 +0.6 1.5 GntR family transcriptional regulator compare
BWI76_RS11520 +0.6 0.8 hypothetical protein compare
BWI76_RS15785 +0.6 2.5 replication protein compare
BWI76_RS14350 +0.6 1.4 hypothetical protein compare
BWI76_RS01940 +0.6 1.9 hypothetical protein compare
BWI76_RS09145 +0.6 1.8 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS21380 +0.6 2.1 uracil-DNA glycosylase compare
BWI76_RS17740 +0.6 2.8 SpoVR family protein compare
BWI76_RS20915 +0.6 2.9 peroxiredoxin compare
BWI76_RS13185 +0.6 3.1 MFS transporter compare
BWI76_RS27395 +0.6 1.9 hypothetical protein compare
BWI76_RS26810 +0.6 2.7 cellulose biosynthesis protein BcsG compare
BWI76_RS24810 +0.6 1.5 hypothetical protein compare
BWI76_RS22360 +0.6 2.3 hydrogenase formation protein HypD compare
BWI76_RS23705 +0.6 1.7 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS05005 +0.6 1.5 polynucleotide adenylyltransferase compare
BWI76_RS11350 +0.6 2.4 DeoR family transcriptional regulator compare
BWI76_RS21495 +0.6 2.6 outer membrane lipoprotein compare
BWI76_RS04205 +0.6 2.6 right oriC-binding transcriptional activator compare
BWI76_RS15195 +0.6 1.4 DUF4186 domain-containing protein compare
BWI76_RS10840 +0.6 1.8 membrane protein compare
BWI76_RS20705 +0.5 2.3 thiosulfate transporter subunit compare
BWI76_RS17665 +0.5 1.4 proteasome-type protease compare
BWI76_RS08535 +0.5 0.4 translocation protein TolB compare
BWI76_RS19605 +0.5 2.7 CidB/LrgB family autolysis modulator compare
BWI76_RS07790 +0.5 1.4 plasmid stabilization protein compare
BWI76_RS00950 +0.5 2.2 ATP-dependent protease compare
BWI76_RS11430 +0.5 0.7 lipoprotein compare
BWI76_RS09530 +0.5 0.7 hypothetical protein compare
BWI76_RS11940 +0.5 2.0 aconitate hydratase 1 compare
BWI76_RS25000 +0.5 0.9 malonate decarboxylase acyl carrier protein compare
BWI76_RS21580 +0.5 0.7 SsrA-binding protein compare
BWI76_RS23915 +0.5 0.7 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS12480 +0.5 2.2 TIGR01620 family protein compare
BWI76_RS11435 +0.5 0.8 hypothetical protein compare
BWI76_RS09020 +0.5 1.8 6-phospho-beta-glucosidase compare
BWI76_RS27450 +0.5 1.4 ferredoxin--NADP(+) reductase compare
BWI76_RS19100 +0.5 1.8 putative acid phosphatase compare
BWI76_RS21105 +0.5 1.8 penicillin-binding protein 1C compare
BWI76_RS09050 +0.5 2.0 MFS transporter compare
BWI76_RS16475 +0.5 1.8 alkene reductase compare
BWI76_RS09135 +0.5 1.6 oxidoreductase compare
BWI76_RS06475 +0.5 1.1 protoheme IX farnesyltransferase compare
BWI76_RS02780 +0.5 3.1 translocation and assembly module TamB compare
BWI76_RS11810 +0.5 1.5 outer membrane protein OmpW compare
BWI76_RS23520 +0.5 1.0 hypothetical protein compare
BWI76_RS20910 +0.5 2.6 glycine cleavage system transcriptional repressor compare
BWI76_RS24635 +0.5 2.4 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS19320 +0.5 2.3 putative ABC transport system periplasmic binding protein compare
BWI76_RS19615 +0.5 0.9 vancomycin high temperature exclusion protein compare
BWI76_RS12670 +0.5 1.2 DNA polymerase V subunit UmuD compare
BWI76_RS01110 +0.5 1.6 TDP-fucosamine acetyltransferase compare
BWI76_RS00290 +0.5 2.1 Ribokinase (EC 2.7.1.15) (from data) compare
BWI76_RS24580 +0.5 2.4 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS01380 +0.5 1.5 YigZ family protein compare
BWI76_RS22485 +0.5 2.1 hypothetical protein compare
BWI76_RS16585 +0.5 2.9 trehalose synthase compare
BWI76_RS21760 +0.5 2.0 SMP-30/gluconolactonase/LRE family protein compare
BWI76_RS25905 +0.5 1.3 hypothetical protein compare
BWI76_RS16555 +0.5 1.6 hypothetical protein compare
BWI76_RS08380 +0.5 0.9 endonuclease VIII compare
BWI76_RS08605 +0.5 1.2 phosphoglyceromutase compare
BWI76_RS26410 +0.5 1.0 membrane protein compare
BWI76_RS26790 +0.5 2.4 cell division protein compare
BWI76_RS11410 +0.5 1.1 leucine efflux protein compare
BWI76_RS21480 +0.5 2.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS24625 +0.5 1.9 hypothetical protein compare
BWI76_RS12575 +0.5 2.2 FAD-dependent oxidoreductase compare
BWI76_RS02680 +0.5 1.1 EamA family transporter compare
BWI76_RS27945 +0.5 2.0 2-oxo-3-deoxygalactonate kinase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms