Experiment set32IT023 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

200 most important genes:

  gene name fitness t score description  
BWI76_RS09645 -6.6 -2.4 thioredoxin-disulfide reductase compare
BWI76_RS15825 -5.9 -5.8 hypothetical protein compare
BWI76_RS01210 -5.6 -3.8 tyrosine recombinase XerC compare
BWI76_RS02995 -5.3 -11.4 aspartate carbamoyltransferase compare
BWI76_RS23265 -5.3 -5.6 hypothetical protein compare
BWI76_RS02530 -5.3 -3.6 tRNA dimethylallyltransferase compare
BWI76_RS26085 -5.2 -3.2 3-dehydroquinate synthase compare
BWI76_RS04470 -5.0 -11.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS04465 -5.0 -7.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS19010 -4.9 -3.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS19040 -4.7 -7.8 hypothetical protein compare
BWI76_RS04305 -4.3 -1.6 molecular chaperone DnaJ compare
BWI76_RS12090 -4.1 -4.3 HNH endonuclease compare
BWI76_RS15110 -4.1 -15.3 putative excinuclease ABC subunit A compare
BWI76_RS27385 -4.0 -7.9 orotate phosphoribosyltransferase compare
BWI76_RS27305 -3.8 -8.4 glycosyl transferase compare
BWI76_RS06525 -3.8 -6.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS04510 -3.5 -2.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01325 -3.5 -2.8 twin-arginine translocase subunit TatB compare
BWI76_RS23480 -3.4 -12.1 EAL domain-containing protein compare
BWI76_RS26455 -3.3 -4.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS10990 -3.3 -3.4 dihydroorotase compare
BWI76_RS09660 -3.2 -2.2 DNA translocase FtsK compare
BWI76_RS15115 -3.2 -6.1 MFS transporter compare
BWI76_RS20650 -3.2 -2.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS09910 -3.1 -15.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21370 -3.1 -2.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS26460 -2.9 -4.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00600 -2.9 -9.6 LacI family transcriptional regulator compare
BWI76_RS06765 -2.9 -2.9 transcriptional regulator compare
BWI76_RS27430 -2.9 -1.4 (p)ppGpp synthetase compare
BWI76_RS15840 -2.8 -3.2 prophage protein compare
BWI76_RS24025 -2.7 -9.6 agmatinase compare
BWI76_RS15225 -2.7 -2.8 DeoR family transcriptional regulator compare
BWI76_RS26570 -2.7 -2.9 anion permease compare
BWI76_RS15850 -2.6 -1.1 DUF1317 domain-containing protein compare
BWI76_RS19050 -2.6 -8.5 NAD(P)-dependent oxidoreductase compare
BWI76_RS06530 -2.6 -5.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS05200 -2.5 -1.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS08120 -2.4 -5.7 cobalt transporter compare
BWI76_RS12790 -2.4 -1.7 lactate dehydrogenase compare
BWI76_RS26395 -2.4 -1.8 cell division protein FtsE compare
BWI76_RS23240 -2.3 -3.1 exonuclease V subunit gamma compare
BWI76_RS05120 -2.3 -9.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS19035 -2.2 -4.6 dTDP-rhamnosyl transferase compare
BWI76_RS00720 -2.2 -2.9 DNA-binding response regulator compare
BWI76_RS01200 -2.2 -2.1 diaminopimelate epimerase compare
BWI76_RS26775 -2.2 -3.9 endo-1,4-D-glucanase compare
BWI76_RS01350 -2.1 -1.3 NAD(P)H-flavin reductase compare
BWI76_RS19060 -2.1 -13.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS23230 -2.1 -2.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS11965 -2.1 -3.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09190 -2.1 -3.9 hypothetical protein compare
BWI76_RS13915 -2.0 -4.3 magnesium transport protein MgtC compare
BWI76_RS19845 -2.0 -5.4 phosphatase compare
BWI76_RS17720 -2.0 -1.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS27440 -2.0 -3.3 DNA helicase RecG compare
BWI76_RS17190 -2.0 -2.7 TonB system transport protein TonB compare
BWI76_RS24280 -2.0 -4.3 biopolymer transporter ExbB compare
BWI76_RS27235 -1.9 -8.8 murein hydrolase activator EnvC compare
BWI76_RS26390 -1.9 -3.6 cell division protein FtsX compare
BWI76_RS27390 -1.9 -4.1 ribonuclease PH compare
BWI76_RS27290 -1.8 -5.8 hypothetical protein compare
BWI76_RS05140 -1.8 -4.4 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS26670 -1.8 -6.6 two-component sensor histidine kinase compare
BWI76_RS25870 -1.8 -1.7 elongation factor Tu compare
BWI76_RS17300 -1.8 -1.8 tRNA-Tyr compare
BWI76_RS15060 -1.8 -3.0 MarR family transcriptional regulator compare
BWI76_RS24400 -1.8 -5.9 outer membrane channel protein TolC compare
BWI76_RS13920 -1.8 -3.8 magnesium-translocating P-type ATPase compare
BWI76_RS21450 -1.8 -2.1 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS15215 -1.8 -1.3 N-acetyltransferase compare
BWI76_RS25920 -1.8 -2.2 peptidylprolyl isomerase compare
BWI76_RS19055 -1.7 -7.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS01220 -1.7 -6.8 DNA-dependent helicase II compare
BWI76_RS01330 -1.7 -3.3 twin-arginine translocase subunit TatC compare
BWI76_RS18715 -1.7 -5.1 hypothetical protein compare
BWI76_RS17975 -1.7 -4.1 tail-specific protease compare
BWI76_RS06770 -1.7 -6.3 Hha toxicity attenuator compare
BWI76_RS18770 -1.6 -1.2 DNA gyrase inhibitor compare
BWI76_RS21580 -1.6 -1.5 SsrA-binding protein compare
BWI76_RS26665 -1.6 -2.0 DNA-binding response regulator compare
BWI76_RS24275 -1.6 -4.3 biopolymer transport protein ExbD compare
BWI76_RS08615 -1.6 -4.5 galactokinase compare
BWI76_RS05015 -1.5 -1.8 transcriptional regulator compare
BWI76_RS15350 -1.5 -1.4 hypothetical protein compare
BWI76_RS00345 -1.5 -2.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS26075 -1.5 -2.8 DNA adenine methylase compare
BWI76_RS15830 -1.5 -1.8 hypothetical protein compare
BWI76_RS23485 -1.5 -7.8 hypothetical protein compare
BWI76_RS18710 -1.4 -8.2 GGDEF-domain containing protein compare
BWI76_RS15860 -1.4 -1.6 adenine-specific DNA methyltransferase compare
BWI76_RS20360 -1.4 -1.1 cell division protein DedD compare
BWI76_RS01890 -1.4 -3.7 transcriptional regulator Zur compare
BWI76_RS25065 -1.4 -2.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS11155 -1.4 -2.3 penicillin-binding protein activator LpoB compare
BWI76_RS12170 -1.4 -4.4 hypothetical protein compare
BWI76_RS16910 -1.4 -2.3 2-keto-4-pentenoate hydratase compare
BWI76_RS20355 -1.4 -2.9 colicin V production protein compare
BWI76_RS09635 -1.4 -1.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS01205 -1.4 -3.1 DUF484 family protein compare
BWI76_RS21565 -1.4 -1.2 outer membrane protein assembly factor BamE compare
BWI76_RS14075 -1.3 -1.4 TetR family transcriptional regulator compare
BWI76_RS04515 -1.3 -1.3 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS26200 -1.3 -2.8 starch synthase compare
BWI76_RS15835 -1.3 -1.0 hypothetical protein compare
BWI76_RS13820 -1.3 -1.1 hypothetical protein compare
BWI76_RS19840 -1.3 -1.3 hypothetical protein compare
BWI76_RS05135 -1.3 -3.0 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS19375 -1.3 -2.5 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS21505 -1.3 -1.3 hypothetical protein compare
BWI76_RS06535 -1.3 -3.6 endopeptidase La compare
BWI76_RS05130 -1.3 -2.7 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS11135 -1.3 -5.0 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS17980 -1.3 -2.8 RNA chaperone ProQ compare
BWI76_RS12255 -1.3 -8.4 hypothetical protein compare
BWI76_RS01870 -1.2 -2.4 diacylglycerol kinase compare
BWI76_RS25060 -1.2 -2.6 lipoprotein NlpI compare
BWI76_RS04270 -1.2 -3.4 transaldolase compare
BWI76_RS02735 -1.2 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS16965 -1.2 -2.2 murein lipoprotein compare
BWI76_RS00640 -1.2 -1.6 L-rhamnose mutarotase compare
BWI76_RS19905 -1.2 -3.8 OmpK36 porin compare
BWI76_RS25070 -1.2 -1.2 hypothetical protein compare
BWI76_RS08620 -1.2 -3.7 galactose-1-phosphate uridylyltransferase compare
BWI76_RS02725 -1.2 -1.2 HxlR family transcriptional regulator compare
BWI76_RS19045 -1.1 -3.7 capsular polysaccharide biosynthesis protein compare
BWI76_RS16260 -1.1 -1.8 two-component sensor histidine kinase compare
BWI76_RS21810 -1.1 -1.3 universal stress protein compare
BWI76_RS18200 -1.1 -3.7 copper homeostasis protein CutC compare
BWI76_RS22125 -1.1 -1.4 membrane protein compare
BWI76_RS27915 -1.1 -2.0 YceK/YidQ family lipoprotein compare
BWI76_RS22950 -1.1 -2.2 membrane protein compare
BWI76_RS26965 -1.1 -4.2 hypothetical protein compare
BWI76_RS12265 -1.1 -5.6 hypothetical protein compare
BWI76_RS08530 -1.1 -1.7 protein TolA compare
BWI76_RS11980 -1.1 -1.3 DeoR family transcriptional regulator compare
BWI76_RS15705 -1.1 -3.0 putative holin protein compare
BWI76_RS24055 -1.1 -2.9 MFS transporter compare
BWI76_RS08315 -1.1 -2.1 K+-transporting ATPase subunit B compare
BWI76_RS25505 -1.1 -4.8 RNase E specificity factor CsrD compare
BWI76_RS09080 -1.1 -1.9 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS02570 -1.1 -5.6 transcriptional regulator compare
BWI76_RS16250 -1.1 -4.1 DNA-binding response regulator compare
BWI76_RS05450 -1.1 -1.2 ribonuclease HI compare
BWI76_RS26425 -1.1 -5.7 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS14835 -1.0 -1.0 hypothetical protein compare
BWI76_RS19910 -1.0 -4.7 phosphotransferase RcsD compare
BWI76_RS19070 -1.0 -6.4 rhamnosyltransferase compare
BWI76_RS21165 -1.0 -1.5 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS05555 -1.0 -1.8 Crl family RNA polymerase assembly factor compare
BWI76_RS13880 -1.0 -3.3 lysine transporter LysE compare
BWI76_RS16025 -1.0 -1.5 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS11285 -1.0 -1.5 transcriptional regulator compare
BWI76_RS23360 -1.0 -1.5 diaminopimelate decarboxylase compare
BWI76_RS21075 -1.0 -1.2 membrane protein compare
BWI76_RS13160 -1.0 -1.7 azoreductase compare
BWI76_RS10935 -1.0 -2.8 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21540 -1.0 -4.1 membrane protein compare
BWI76_RS09895 -1.0 -1.9 aliphatic sulfonates ABC transporter ATP-binding protein compare
BWI76_RS13330 -1.0 -1.1 tellurite resistance methyltransferase TehB compare
BWI76_RS05840 -1.0 -3.1 glutamate 5-kinase compare
BWI76_RS05835 -0.9 -2.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS22205 -0.9 -1.3 cation ABC transporter ATP-binding protein compare
BWI76_RS27505 -0.9 -2.5 septal ring assembly protein ZapB compare
BWI76_RS27165 -0.9 -2.7 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS07845 -0.9 -1.3 LacI family transcriptional regulator compare
BWI76_RS14540 -0.9 -2.4 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS00025 -0.9 -0.9 hypothetical protein compare
BWI76_RS19535 -0.9 -3.8 putative integral membrane protein compare
BWI76_RS13600 -0.9 -2.3 hypothetical protein compare
BWI76_RS14515 -0.9 -3.0 yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ compare
BWI76_RS00875 -0.9 -3.6 DNA-binding transcriptional regulator FabR compare
BWI76_RS12245 -0.9 -4.1 hypothetical protein compare
BWI76_RS06290 -0.9 -1.5 ACP phosphodiesterase compare
BWI76_RS20065 -0.9 -3.4 1,4-dihydroxy-2-naphthoyl-CoA synthase compare
BWI76_RS18140 -0.9 -1.1 zinc ABC transporter permease compare
BWI76_RS12270 -0.9 -2.9 hypothetical protein compare
BWI76_RS20165 -0.9 -3.6 NADH-quinone oxidoreductase subunit G compare
BWI76_RS21245 -0.9 -1.5 nitrogen regulatory protein P-II compare
BWI76_RS08025 -0.9 -2.1 septal ring lytic transglycosylase RlpA compare
BWI76_RS02895 -0.9 -2.9 hypothetical protein compare
BWI76_RS09640 -0.9 -1.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS11835 -0.9 -1.4 putative regulatory protein MarR compare
BWI76_RS10400 -0.9 -2.4 hypothetical protein compare
BWI76_RS26870 -0.8 -2.2 dipeptide ABC transporter ATP-binding protein compare
BWI76_RS07780 -0.8 -0.9 hypothetical protein compare
BWI76_RS00400 -0.8 -0.5 glutamine synthetase compare
BWI76_RS14320 -0.8 -1.6 hypothetical protein compare
BWI76_RS14520 -0.8 -3.5 hypothetical protein compare
BWI76_RS08350 -0.8 -1.3 carboxylase compare
BWI76_RS18920 -0.8 -1.7 ATP phosphoribosyltransferase compare
BWI76_RS12070 -0.8 -0.9 hypothetical protein compare
BWI76_RS11435 -0.8 -1.3 hypothetical protein compare
BWI76_RS14435 -0.8 -0.8 glutamine ABC transporter ATP-binding protein compare
BWI76_RS16360 -0.8 -1.1 electron transport complex subunit RsxB compare
BWI76_RS20140 -0.8 -2.4 NADH-quinone oxidoreductase subunit L compare
BWI76_RS16315 -0.8 -1.0 SirA-like protein compare
BWI76_RS12250 -0.8 -5.6 terminase compare
BWI76_RS27280 -0.8 -3.6 polymerase compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms