Experiment set32IT022 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS09645 -6.8 -2.6 thioredoxin-disulfide reductase compare
BWI76_RS15825 -5.5 -4.0 hypothetical protein compare
BWI76_RS04470 -5.4 -13.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS02530 -5.3 -3.6 tRNA dimethylallyltransferase compare
BWI76_RS23265 -5.2 -6.7 hypothetical protein compare
BWI76_RS04510 -5.2 -3.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -5.2 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS04465 -5.2 -13.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS15110 -5.0 -18.0 putative excinuclease ABC subunit A compare
BWI76_RS02995 -4.8 -12.8 aspartate carbamoyltransferase compare
BWI76_RS19040 -4.7 -8.5 hypothetical protein compare
BWI76_RS10990 -4.6 -5.6 dihydroorotase compare
BWI76_RS15115 -4.4 -4.3 MFS transporter compare
BWI76_RS12090 -3.8 -4.5 HNH endonuclease compare
BWI76_RS01325 -3.7 -3.7 twin-arginine translocase subunit TatB compare
BWI76_RS23240 -3.5 -2.4 exonuclease V subunit gamma compare
BWI76_RS09660 -3.5 -2.4 DNA translocase FtsK compare
BWI76_RS15225 -3.3 -1.9 DeoR family transcriptional regulator compare
BWI76_RS19035 -3.3 -8.1 dTDP-rhamnosyl transferase compare
BWI76_RS01210 -3.2 -3.0 tyrosine recombinase XerC compare
BWI76_RS00600 -3.1 -11.5 LacI family transcriptional regulator compare
BWI76_RS27385 -3.1 -9.5 orotate phosphoribosyltransferase compare
BWI76_RS09910 -3.0 -15.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS02725 -3.0 -1.9 HxlR family transcriptional regulator compare
BWI76_RS06525 -2.8 -5.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS15840 -2.8 -3.0 prophage protein compare
BWI76_RS13915 -2.8 -7.7 magnesium transport protein MgtC compare
BWI76_RS19055 -2.6 -11.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS19050 -2.6 -10.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS23230 -2.5 -1.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS19060 -2.5 -15.7 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS12170 -2.5 -9.6 hypothetical protein compare
BWI76_RS05120 -2.4 -9.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS20150 -2.4 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS20895 -2.4 -5.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11965 -2.4 -4.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00345 -2.2 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS02815 -2.2 -3.0 fructose-bisphosphatase class I compare
BWI76_RS26075 -2.2 -5.5 DNA adenine methylase compare
BWI76_RS01610 -2.2 -7.2 phosphoribosylamine--glycine ligase compare
BWI76_RS26775 -2.2 -4.2 endo-1,4-D-glucanase compare
BWI76_RS15850 -2.1 -0.8 DUF1317 domain-containing protein compare
BWI76_RS13920 -2.1 -5.2 magnesium-translocating P-type ATPase compare
BWI76_RS20650 -2.1 -2.4 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS20965 -2.1 -2.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS05200 -2.0 -1.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS07070 -1.9 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS11300 -1.9 -1.7 cupin compare
BWI76_RS07065 -1.9 -5.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22850 -1.9 -3.5 tRNA pseudouridine synthase TruC compare
BWI76_RS15835 -1.9 -1.2 hypothetical protein compare
BWI76_RS01870 -1.9 -4.5 diacylglycerol kinase compare
BWI76_RS01200 -1.9 -1.8 diaminopimelate epimerase compare
BWI76_RS09640 -1.8 -2.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21580 -1.7 -1.4 SsrA-binding protein compare
BWI76_RS09970 -1.7 -2.2 porin OmpA compare
BWI76_RS26665 -1.6 -3.7 DNA-binding response regulator compare
BWI76_RS27390 -1.6 -3.9 ribonuclease PH compare
BWI76_RS01220 -1.6 -5.6 DNA-dependent helicase II compare
BWI76_RS23885 -1.6 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS09635 -1.6 -1.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS06530 -1.6 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS05835 -1.5 -2.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS17975 -1.5 -4.3 tail-specific protease compare
BWI76_RS00400 -1.5 -0.9 glutamine synthetase compare
BWI76_RS20355 -1.5 -3.4 colicin V production protein compare
BWI76_RS12265 -1.5 -6.1 hypothetical protein compare
BWI76_RS26670 -1.5 -7.1 two-component sensor histidine kinase compare
BWI76_RS19905 -1.5 -4.2 OmpK36 porin compare
BWI76_RS23480 -1.5 -6.7 EAL domain-containing protein compare
BWI76_RS01205 -1.4 -3.3 DUF484 family protein compare
BWI76_RS26570 -1.4 -2.1 anion permease compare
BWI76_RS08120 -1.4 -5.0 cobalt transporter compare
BWI76_RS08535 -1.4 -1.8 translocation protein TolB compare
BWI76_RS15830 -1.4 -1.7 hypothetical protein compare
BWI76_RS13595 -1.3 -3.1 transcriptional regulator compare
BWI76_RS01615 -1.3 -4.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS15860 -1.3 -1.3 adenine-specific DNA methyltransferase compare
BWI76_RS12245 -1.3 -6.9 hypothetical protein compare
BWI76_RS27165 -1.3 -3.9 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS16965 -1.3 -2.2 murein lipoprotein compare
BWI76_RS20940 -1.3 -1.9 uracil/xanthine transporter compare
BWI76_RS01350 -1.3 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS20795 -1.3 -1.1 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS12255 -1.2 -8.5 hypothetical protein compare
BWI76_RS19070 -1.2 -7.4 rhamnosyltransferase compare
BWI76_RS24280 -1.2 -2.4 biopolymer transporter ExbB compare
BWI76_RS08520 -1.2 -1.6 colicin transporter TolQ compare
BWI76_RS17565 -1.2 -2.3 hypothetical protein compare
BWI76_RS14805 -1.2 -2.6 hypothetical protein compare
BWI76_RS01330 -1.2 -2.5 twin-arginine translocase subunit TatC compare
BWI76_RS11700 -1.2 -1.4 hypothetical protein compare
BWI76_RS27430 -1.2 -0.9 (p)ppGpp synthetase compare
BWI76_RS22690 -1.1 -2.7 adenylyl-sulfate kinase compare
BWI76_RS23020 -1.1 -2.1 cobalamin biosynthesis protein CbiQ compare
BWI76_RS12250 -1.1 -7.7 terminase compare
BWI76_RS21265 -1.1 -5.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS24080 -1.1 -1.4 DUF179 domain-containing protein compare
BWI76_RS26440 -1.1 -1.4 hypothetical protein compare
BWI76_RS05130 -1.1 -5.0 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS20350 -1.1 -3.3 amidophosphoribosyltransferase compare
BWI76_RS24340 -1.1 -4.7 two-component sensor histidine kinase compare
BWI76_RS02735 -1.1 -2.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS12270 -1.1 -2.6 hypothetical protein compare
BWI76_RS15705 -1.0 -2.4 putative holin protein compare
BWI76_RS22760 -1.0 -3.2 sulfite reductase subunit beta compare
BWI76_RS04705 -1.0 -3.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS24025 -1.0 -4.2 agmatinase compare
BWI76_RS12240 -1.0 -6.3 terminase small subunit compare
BWI76_RS25300 -1.0 -2.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12235 -1.0 -2.6 hypothetical protein compare
BWI76_RS07640 -1.0 -1.1 short chain dehydrogenase compare
BWI76_RS08180 -1.0 -5.5 asparagine synthase B compare
BWI76_RS25285 -1.0 -1.0 HPr family phosphocarrier protein compare
BWI76_RS00140 -1.0 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS00390 -1.0 -5.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS03180 -1.0 -1.1 phage transcriptional regulator, AlpA compare
BWI76_RS25060 -1.0 -1.5 lipoprotein NlpI compare
BWI76_RS19845 -0.9 -4.1 phosphatase compare
BWI76_RS12275 -0.9 -4.1 hypothetical protein compare
BWI76_RS00965 -0.9 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS16470 -0.9 -1.4 transcriptional repressor NemR compare
BWI76_RS19870 -0.9 -1.6 malate:quinone oxidoreductase compare
BWI76_RS26200 -0.9 -4.1 starch synthase compare
BWI76_RS26460 -0.9 -2.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS14375 -0.9 -2.5 hypothetical protein compare
BWI76_RS08385 -0.9 -2.3 citrate (Si)-synthase compare
BWI76_RS12350 -0.9 -4.8 kinase compare
BWI76_RS27940 -0.9 -1.2 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS19045 -0.9 -4.0 capsular polysaccharide biosynthesis protein compare
BWI76_RS07855 -0.9 -1.7 PucR family transcriptional regulator compare
BWI76_RS05140 -0.9 -2.6 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS06800 -0.9 -1.1 DUF2496 domain-containing protein compare
BWI76_RS20970 -0.9 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS12295 -0.9 -1.9 hypothetical protein compare
BWI76_RS25920 -0.9 -1.7 peptidylprolyl isomerase compare
BWI76_RS20160 -0.9 -2.3 NADH-quinone oxidoreductase subunit H compare
BWI76_RS27235 -0.9 -5.8 murein hydrolase activator EnvC compare
BWI76_RS07725 -0.9 -1.3 iron-enterobactin transporter permease compare
BWI76_RS27440 -0.9 -1.8 DNA helicase RecG compare
BWI76_RS22755 -0.9 -3.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS09755 -0.9 -2.8 phosphoserine transaminase compare
BWI76_RS18455 -0.9 -1.3 tRNA-Ser compare
BWI76_RS22765 -0.9 -3.7 sulfite reductase subunit alpha compare
BWI76_RS07680 -0.9 -2.0 transketolase compare
BWI76_RS04160 -0.9 -4.2 phosphoserine phosphatase compare
BWI76_RS17315 -0.9 -1.4 EamA family transporter compare
BWI76_RS19310 -0.9 -1.6 ABC transporter permease compare
BWI76_RS11135 -0.8 -4.4 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS13130 -0.8 -2.0 phenylacetic acid degradation protein PaaD compare
BWI76_RS10935 -0.8 -2.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS07465 -0.8 -1.3 TetR family transcriptional regulator compare
BWI76_RS23915 -0.8 -1.9 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS08525 -0.8 -1.8 colicin transporter compare
BWI76_RS18360 -0.8 -1.5 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS14320 -0.8 -2.1 hypothetical protein compare
BWI76_RS26425 -0.8 -4.2 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS21310 -0.8 -1.0 DNA repair protein RecO compare
BWI76_RS24060 -0.8 -1.8 SprT family protein compare
BWI76_RS18710 -0.8 -5.3 GGDEF-domain containing protein compare
BWI76_RS11520 -0.8 -1.0 hypothetical protein compare
BWI76_RS14435 -0.8 -1.2 glutamine ABC transporter ATP-binding protein compare
BWI76_RS21000 -0.8 -2.5 exopolyphosphatase compare
BWI76_RS12495 -0.8 -1.3 2-Cys peroxiredoxin compare
BWI76_RS19710 -0.8 -1.5 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS17155 -0.8 -1.3 hypothetical protein compare
BWI76_RS20785 -0.8 -1.0 ethanolamine utilization protein EutJ compare
BWI76_RS22130 -0.8 -1.8 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS09655 -0.8 -2.7 leucine-responsive regulatory protein compare
BWI76_RS16845 -0.7 -2.9 ABC transporter permease compare
BWI76_RS12360 -0.7 -4.1 hypothetical protein compare
BWI76_RS12195 -0.7 -1.5 hypothetical protein compare
BWI76_RS20050 -0.7 -1.2 hypothetical protein compare
BWI76_RS03295 -0.7 -1.0 transposase compare
BWI76_RS21685 -0.7 -1.0 hypothetical protein compare
BWI76_RS12285 -0.7 -2.4 hypothetical protein compare
BWI76_RS01650 -0.7 -2.5 acetyltransferase compare
BWI76_RS19460 -0.7 -1.6 lipoprotein compare
BWI76_RS11900 -0.7 -1.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS12410 -0.7 -4.1 hypothetical protein compare
BWI76_RS12220 -0.7 -4.2 hypothetical protein compare
BWI76_RS23920 -0.7 -1.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS16235 -0.7 -2.8 membrane protein compare
BWI76_RS01800 -0.7 -3.0 glucose-6-phosphate isomerase compare
BWI76_RS23125 -0.7 -1.6 propanediol dehydratase small subunit compare
BWI76_RS15290 -0.7 -1.1 transcriptional regulator compare
BWI76_RS19770 -0.7 -1.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS06830 -0.7 -2.5 recombination protein RecR compare
BWI76_RS12190 -0.7 -2.6 glycoside hydrolase family protein compare
BWI76_RS17190 -0.7 -0.9 TonB system transport protein TonB compare
BWI76_RS05860 -0.7 -2.6 alkanesulfonates-binding protein compare
BWI76_RS22095 -0.7 -0.9 multidrug export protein EmrA compare
BWI76_RS14825 -0.7 -2.2 dienelactone hydrolase family protein compare
BWI76_RS11155 -0.7 -1.4 penicillin-binding protein activator LpoB compare
BWI76_RS19700 -0.7 -0.9 deoxyribonuclease IV compare
BWI76_RS18200 -0.7 -4.3 copper homeostasis protein CutC compare
BWI76_RS06730 -0.7 -1.1 lac repressor compare
BWI76_RS08530 -0.7 -1.4 protein TolA compare
BWI76_RS18855 -0.7 -1.9 cysteine desulfurase NifS compare
BWI76_RS09925 -0.7 -2.4 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms