Experiment set32IT021 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -10.8 -7.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -10.4 -10.1 aspartate carbamoyltransferase compare
BWI76_RS04470 -9.2 -15.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS10990 -8.2 -5.1 dihydroorotase compare
BWI76_RS23265 -8.0 -5.1 hypothetical protein compare
BWI76_RS05120 -7.8 -14.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01210 -7.3 -5.1 tyrosine recombinase XerC compare
BWI76_RS09645 -6.7 -3.1 thioredoxin-disulfide reductase compare
BWI76_RS15110 -5.9 -13.8 putative excinuclease ABC subunit A compare
BWI76_RS06525 -5.6 -7.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS15825 -5.5 -3.0 hypothetical protein compare
BWI76_RS19040 -5.3 -7.3 hypothetical protein compare
BWI76_RS02530 -5.1 -3.5 tRNA dimethylallyltransferase compare
BWI76_RS04510 -5.1 -3.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -5.1 -3.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS09910 -4.8 -17.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS15115 -4.7 -3.3 MFS transporter compare
BWI76_RS27385 -4.5 -9.4 orotate phosphoribosyltransferase compare
BWI76_RS19035 -4.3 -7.8 dTDP-rhamnosyl transferase compare
BWI76_RS04305 -4.3 -2.0 molecular chaperone DnaJ compare
BWI76_RS00600 -4.1 -13.8 LacI family transcriptional regulator compare
BWI76_RS17720 -4.0 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS15225 -4.0 -3.1 DeoR family transcriptional regulator compare
BWI76_RS01870 -3.8 -6.9 diacylglycerol kinase compare
BWI76_RS08520 -3.5 -3.5 colicin transporter TolQ compare
BWI76_RS23240 -3.5 -2.4 exonuclease V subunit gamma compare
BWI76_RS09660 -3.4 -2.3 DNA translocase FtsK compare
BWI76_RS26665 -3.3 -4.6 DNA-binding response regulator compare
BWI76_RS26085 -3.3 -2.7 3-dehydroquinate synthase compare
BWI76_RS11965 -3.3 -4.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26075 -3.1 -6.7 DNA adenine methylase compare
BWI76_RS19055 -3.0 -11.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS16965 -3.0 -3.2 murein lipoprotein compare
BWI76_RS09970 -2.9 -2.3 porin OmpA compare
BWI76_RS26460 -2.8 -4.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS19060 -2.8 -19.3 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS13915 -2.8 -6.1 magnesium transport protein MgtC compare
BWI76_RS27390 -2.7 -6.9 ribonuclease PH compare
BWI76_RS07070 -2.7 -5.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS19050 -2.7 -10.8 NAD(P)-dependent oxidoreductase compare
BWI76_RS19845 -2.7 -10.3 phosphatase compare
BWI76_RS00180 -2.6 -1.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS25920 -2.5 -3.2 peptidylprolyl isomerase compare
BWI76_RS26440 -2.5 -2.3 hypothetical protein compare
BWI76_RS23230 -2.5 -1.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS01330 -2.5 -3.2 twin-arginine translocase subunit TatC compare
BWI76_RS08535 -2.4 -3.1 translocation protein TolB compare
BWI76_RS06530 -2.4 -6.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS12170 -2.4 -6.0 hypothetical protein compare
BWI76_RS04530 -2.4 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS16260 -2.4 -3.4 two-component sensor histidine kinase compare
BWI76_RS12090 -2.3 -1.6 HNH endonuclease compare
BWI76_RS00720 -2.3 -4.1 DNA-binding response regulator compare
BWI76_RS26455 -2.3 -4.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23480 -2.2 -9.8 EAL domain-containing protein compare
BWI76_RS13920 -2.2 -4.6 magnesium-translocating P-type ATPase compare
BWI76_RS26775 -2.2 -3.1 endo-1,4-D-glucanase compare
BWI76_RS19840 -2.2 -2.2 hypothetical protein compare
BWI76_RS26390 -2.1 -5.7 cell division protein FtsX compare
BWI76_RS04715 -2.1 -2.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS17190 -2.1 -2.8 TonB system transport protein TonB compare
BWI76_RS09190 -2.1 -4.6 hypothetical protein compare
BWI76_RS05200 -2.1 -2.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS26670 -2.1 -10.2 two-component sensor histidine kinase compare
BWI76_RS21370 -2.0 -2.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS08120 -2.0 -4.6 cobalt transporter compare
BWI76_RS01220 -1.9 -8.7 DNA-dependent helicase II compare
BWI76_RS08525 -1.8 -2.6 colicin transporter compare
BWI76_RS19070 -1.8 -11.9 rhamnosyltransferase compare
BWI76_RS26200 -1.8 -7.7 starch synthase compare
BWI76_RS20970 -1.8 -2.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS11155 -1.8 -4.3 penicillin-binding protein activator LpoB compare
BWI76_RS20965 -1.8 -4.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20355 -1.8 -3.8 colicin V production protein compare
BWI76_RS21265 -1.8 -10.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00355 -1.8 -2.0 DNA polymerase I compare
BWI76_RS26570 -1.8 -2.9 anion permease compare
BWI76_RS08530 -1.8 -2.8 protein TolA compare
BWI76_RS16250 -1.7 -5.9 DNA-binding response regulator compare
BWI76_RS01325 -1.7 -3.0 twin-arginine translocase subunit TatB compare
BWI76_RS15860 -1.7 -1.9 adenine-specific DNA methyltransferase compare
BWI76_RS12255 -1.7 -10.8 hypothetical protein compare
BWI76_RS15840 -1.7 -1.5 prophage protein compare
BWI76_RS24275 -1.7 -3.2 biopolymer transport protein ExbD compare
BWI76_RS25060 -1.7 -4.0 lipoprotein NlpI compare
BWI76_RS19905 -1.7 -4.7 OmpK36 porin compare
BWI76_RS01610 -1.6 -8.4 phosphoribosylamine--glycine ligase compare
BWI76_RS01615 -1.6 -6.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS26395 -1.6 -3.0 cell division protein FtsE compare
BWI76_RS21450 -1.6 -2.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS01135 -1.5 -4.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS13595 -1.5 -3.1 transcriptional regulator compare
BWI76_RS20350 -1.5 -4.9 amidophosphoribosyltransferase compare
BWI76_RS27235 -1.5 -7.2 murein hydrolase activator EnvC compare
BWI76_RS00345 -1.5 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS01205 -1.5 -3.7 DUF484 family protein compare
BWI76_RS24340 -1.5 -7.8 two-component sensor histidine kinase compare
BWI76_RS15830 -1.5 -1.8 hypothetical protein compare
BWI76_RS12245 -1.5 -8.5 hypothetical protein compare
BWI76_RS00400 -1.4 -1.0 glutamine synthetase compare
BWI76_RS27165 -1.4 -3.0 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS21310 -1.4 -1.7 DNA repair protein RecO compare
BWI76_RS12265 -1.4 -8.3 hypothetical protein compare
BWI76_RS12270 -1.4 -5.0 hypothetical protein compare
BWI76_RS12240 -1.4 -6.4 terminase small subunit compare
BWI76_RS20150 -1.4 -2.1 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS15975 -1.3 -1.6 hypothetical protein compare
BWI76_RS15850 -1.3 -0.5 DUF1317 domain-containing protein compare
BWI76_RS03155 -1.3 -8.8 hypothetical protein compare
BWI76_RS00875 -1.3 -5.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS05450 -1.3 -1.2 ribonuclease HI compare
BWI76_RS19045 -1.3 -7.0 capsular polysaccharide biosynthesis protein compare
BWI76_RS09755 -1.3 -3.5 phosphoserine transaminase compare
BWI76_RS23760 -1.3 -1.9 tRNA-Gly compare
BWI76_RS24025 -1.3 -5.9 agmatinase compare
BWI76_RS06680 -1.2 -1.5 hypothetical protein compare
BWI76_RS12285 -1.2 -4.2 hypothetical protein compare
BWI76_RS25335 -1.2 -1.7 stringent starvation protein A compare
BWI76_RS12260 -1.2 -4.5 hypothetical protein compare
BWI76_RS04705 -1.2 -3.0 DNA-binding transcriptional regulator FruR compare
BWI76_RS05260 -1.2 -2.0 chaperone compare
BWI76_RS27440 -1.2 -2.5 DNA helicase RecG compare
BWI76_RS15835 -1.2 -0.9 hypothetical protein compare
BWI76_RS01800 -1.2 -2.7 glucose-6-phosphate isomerase compare
BWI76_RS17975 -1.2 -3.9 tail-specific protease compare
BWI76_RS02815 -1.2 -2.5 fructose-bisphosphatase class I compare
BWI76_RS09030 -1.2 -5.4 transpeptidase compare
BWI76_RS12275 -1.2 -6.6 hypothetical protein compare
BWI76_RS12250 -1.1 -7.9 terminase compare
BWI76_RS15990 -1.1 -3.9 serine protease compare
BWI76_RS07065 -1.1 -4.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04160 -1.1 -5.1 phosphoserine phosphatase compare
BWI76_RS08275 -1.1 -2.0 LexA regulated protein compare
BWI76_RS12295 -1.1 -4.6 hypothetical protein compare
BWI76_RS18200 -1.1 -3.3 copper homeostasis protein CutC compare
BWI76_RS20895 -1.1 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS10935 -1.1 -4.5 glucan biosynthesis glucosyltransferase H compare
BWI76_RS27425 -1.1 -1.3 DNA-directed RNA polymerase subunit omega compare
BWI76_RS03160 -1.1 -6.2 hypothetical protein compare
BWI76_RS20435 -1.1 -1.5 chorismate synthase compare
BWI76_RS21690 -1.1 -1.8 hypothetical protein compare
BWI76_RS24885 -1.1 -1.7 PTS galactitol transporter subunit IIB compare
BWI76_RS24280 -1.1 -3.5 biopolymer transporter ExbB compare
BWI76_RS06535 -1.1 -2.9 endopeptidase La compare
BWI76_RS05130 -1.0 -3.7 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS25300 -1.0 -1.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS01630 -1.0 -1.1 16S ribosomal RNA compare
BWI76_RS01080 -1.0 -5.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS12190 -1.0 -4.3 glycoside hydrolase family protein compare
BWI76_RS27435 -1.0 -3.6 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS00390 -1.0 -4.7 two-component system sensor histidine kinase NtrB compare
BWI76_RS20090 -1.0 -3.3 ribonuclease Z compare
BWI76_RS12235 -1.0 -2.7 hypothetical protein compare
BWI76_RS19870 -1.0 -2.2 malate:quinone oxidoreductase compare
BWI76_RS15705 -1.0 -4.5 putative holin protein compare
BWI76_RS12145 -1.0 -0.9 hypothetical protein compare
BWI76_RS12195 -1.0 -2.1 hypothetical protein compare
BWI76_RS11135 -1.0 -3.7 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS12215 -1.0 -4.4 HNH endonuclease compare
BWI76_RS12070 -1.0 -1.4 hypothetical protein compare
BWI76_RS00385 -1.0 -5.6 nitrogen assimilation regulatory protein compare
BWI76_RS05140 -1.0 -3.8 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS15660 -0.9 -1.2 hypothetical protein compare
BWI76_RS05180 -0.9 -5.4 serine endoprotease DegQ compare
BWI76_RS12380 -0.9 -4.1 DNA polymerase V subunit UmuD compare
BWI76_RS05135 -0.9 -3.3 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS08385 -0.9 -3.1 citrate (Si)-synthase compare
BWI76_RS14415 -0.9 -2.1 transcriptional regulator, TetR family protein compare
BWI76_RS03010 -0.9 -4.5 ornithine carbamoyltransferase compare
BWI76_RS17045 -0.9 -1.6 hypothetical protein compare
BWI76_RS09860 -0.9 -2.4 hypothetical protein compare
BWI76_RS12205 -0.9 -4.0 hypothetical protein compare
BWI76_RS12325 -0.9 -7.4 hypothetical protein compare
BWI76_RS19770 -0.9 -2.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS03660 -0.9 -2.8 hypothetical protein compare
BWI76_RS12230 -0.9 -5.0 hypothetical protein compare
BWI76_RS22625 -0.9 -1.8 transcriptional regulator compare
BWI76_RS18710 -0.9 -6.6 GGDEF-domain containing protein compare
BWI76_RS25115 -0.9 -4.7 argininosuccinate synthase compare
BWI76_RS10930 -0.9 -5.5 glucan biosynthesis protein G compare
BWI76_RS12335 -0.9 -3.9 hypothetical protein compare
BWI76_RS11110 -0.9 -2.3 cell division protein YceG compare
BWI76_RS15590 -0.9 -4.2 hypothetical protein compare
BWI76_RS12360 -0.9 -6.1 hypothetical protein compare
BWI76_RS12160 -0.9 -2.9 hypothetical protein compare
BWI76_RS12370 -0.9 -4.8 hypothetical protein compare
BWI76_RS15680 -0.9 -2.6 hypothetical protein compare
BWI76_RS12220 -0.9 -6.5 hypothetical protein compare
BWI76_RS08020 -0.9 -3.6 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS27430 -0.8 -0.9 (p)ppGpp synthetase compare
BWI76_RS18360 -0.8 -1.7 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS23920 -0.8 -3.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS07740 -0.8 -1.7 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS12365 -0.8 -5.5 hypothetical protein compare
BWI76_RS15685 -0.8 -2.0 hypothetical protein compare
BWI76_RS15215 -0.8 -1.0 N-acetyltransferase compare
BWI76_RS12350 -0.8 -4.3 kinase compare
BWI76_RS15650 -0.8 -3.6 gp5 compare
BWI76_RS12290 -0.8 -3.3 hypothetical protein compare
BWI76_RS18715 -0.8 -4.4 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms