Experiment set32IT021 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS14065 +1.2 2.3 hypothetical protein compare
BWI76_RS27875 +1.1 2.4 membrane protein compare
BWI76_RS26875 +1.0 2.8 dipeptide ABC transporter permease DppC compare
BWI76_RS13785 +1.0 1.4 ABC transporter permease compare
BWI76_RS07780 +1.0 2.3 hypothetical protein compare
BWI76_RS20795 +1.0 1.8 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS26300 +0.9 4.3 glycerol-3-phosphate transporter permease compare
BWI76_RS17390 +0.8 1.7 DsrE family protein compare
BWI76_RS02855 +0.8 1.8 cytochrome B562 compare
BWI76_RS24955 +0.8 0.9 hypothetical protein compare
BWI76_RS16515 +0.8 2.6 LysR family transcriptional regulator compare
BWI76_RS26405 +0.7 1.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS01565 +0.7 2.0 NADH pyrophosphatase compare
BWI76_RS23020 +0.7 1.6 cobalamin biosynthesis protein CbiQ compare
BWI76_RS06810 +0.7 1.5 hypothetical protein compare
BWI76_RS02685 +0.7 2.6 opacity-associated protein compare
BWI76_RS15035 +0.7 1.8 metal ABC transporter permease compare
BWI76_RS15195 +0.7 1.2 DUF4186 domain-containing protein compare
BWI76_RS11520 +0.6 1.4 hypothetical protein compare
BWI76_RS22135 +0.6 3.2 transport-associated protein compare
BWI76_RS03665 +0.6 1.1 ABC transporter ATP-binding protein compare
BWI76_RS12420 +0.6 1.3 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS01540 +0.6 2.0 thiamine biosynthesis protein ThiS compare
BWI76_RS07730 +0.6 1.5 iron-enterobactin transporter membrane protein compare
BWI76_RS19215 +0.6 1.7 proline-specific peptidase compare
BWI76_RS15740 +0.6 1.8 HNH endonuclease compare
BWI76_RS25375 +0.6 1.7 hypothetical protein compare
BWI76_RS20565 +0.6 2.2 hypothetical protein compare
BWI76_RS12465 +0.6 1.2 phage shock protein D compare
BWI76_RS26520 +0.6 2.9 nickel import ATP-binding protein NikE compare
BWI76_RS20940 +0.6 1.5 uracil/xanthine transporter compare
BWI76_RS13130 +0.6 2.5 phenylacetic acid degradation protein PaaD compare
BWI76_RS22300 +0.6 2.0 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS01235 +0.6 2.5 hypothetical protein compare
BWI76_RS26005 +0.6 1.3 glutamine amidotransferase compare
BWI76_RS19700 +0.6 1.6 deoxyribonuclease IV compare
BWI76_RS20230 +0.6 1.6 hypothetical protein compare
BWI76_RS12485 +0.6 2.2 TyrR family transcriptional regulator compare
BWI76_RS15190 +0.6 3.7 GGDEF domain-containing protein compare
BWI76_RS22270 +0.6 2.8 nickel transporter compare
BWI76_RS22420 +0.6 1.5 LacI family transcriptional regulator compare
BWI76_RS18605 +0.6 1.0 oxidoreductase molybdopterin-binding protein compare
BWI76_RS02225 +0.6 1.6 phosphonate C-P lyase system protein PhnG compare
BWI76_RS18770 +0.6 1.0 DNA gyrase inhibitor compare
BWI76_RS11675 +0.6 2.2 arginine N-succinyltransferase compare
BWI76_RS02860 +0.6 2.1 glycine dehydrogenase compare
BWI76_RS09530 +0.6 1.1 hypothetical protein compare
BWI76_RS14930 +0.6 2.3 hypothetical protein compare
BWI76_RS06465 +0.6 1.3 IclR family transcriptional regulator compare
BWI76_RS10730 +0.6 2.4 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS00560 +0.5 1.9 hypothetical protein compare
BWI76_RS16315 +0.5 1.3 SirA-like protein compare
BWI76_RS07785 +0.5 0.9 transcriptional regulator compare
BWI76_RS11525 +0.5 2.0 HNH endonuclease compare
BWI76_RS00140 +0.5 0.8 phosphate transport system regulator PhoU compare
BWI76_RS26635 +0.5 2.9 hypothetical protein compare
BWI76_RS20145 +0.5 1.2 NADH-quinone oxidoreductase subunit K compare
BWI76_RS19550 +0.5 2.4 phospho-cellobiase compare
BWI76_RS25485 +0.5 1.2 septum formation protein Maf compare
BWI76_RS04600 +0.5 1.6 inner membrane protein compare
BWI76_RS09520 +0.5 1.9 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS16220 +0.5 1.8 hypothetical protein compare
BWI76_RS17770 +0.5 1.4 isomerase/hydrolase compare
BWI76_RS12595 +0.5 1.1 hypothetical protein compare
BWI76_RS12860 +0.5 1.5 hypothetical protein compare
BWI76_RS08910 +0.5 1.9 transketolase domain-containing protein compare
BWI76_RS13590 +0.5 0.9 hypothetical protein compare
BWI76_RS09515 +0.5 1.4 arginine ABC transporter substrate-binding protein compare
BWI76_RS11705 +0.5 2.4 hypothetical protein compare
BWI76_RS20960 +0.5 2.2 ROK family protein compare
BWI76_RS11895 +0.5 1.6 AraC family transcriptional regulator compare
BWI76_RS08760 +0.5 2.5 biotin synthase compare
BWI76_RS24900 +0.5 1.2 DeoR family transcriptional regulator compare
BWI76_RS21010 +0.5 1.9 Negative regulator of nickel and cobalt uptake (YfgG) (from data) compare
BWI76_RS21130 +0.5 1.3 Fe-S assembly protein IscX compare
BWI76_RS16295 +0.5 1.9 bifunctional PTS system maltose and glucose-specific transporter subunits IICB compare
BWI76_RS27015 +0.5 2.6 hypothetical protein compare
BWI76_RS15260 +0.5 1.3 hypothetical protein compare
BWI76_RS10805 +0.5 2.3 hypothetical protein compare
BWI76_RS07760 +0.5 2.2 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS09450 +0.5 1.2 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS20900 +0.5 1.2 outer membrane protein assembly factor BamC compare
BWI76_RS13010 +0.5 2.1 LysR family transcriptional regulator compare
BWI76_RS17665 +0.5 1.9 proteasome-type protease compare
BWI76_RS20850 +0.5 2.7 oxidoreductase FeS-binding subunit compare
BWI76_RS14925 +0.5 1.7 ABC transporter substrate-binding protein compare
BWI76_RS21235 +0.5 0.9 hypothetical protein compare
BWI76_RS04970 +0.5 1.6 ABC transporter permease compare
BWI76_RS11635 +0.5 1.5 ABC transporter compare
BWI76_RS07970 +0.5 1.4 hypothetical protein compare
BWI76_RS13275 +0.5 1.5 hypothetical protein compare
BWI76_RS03850 +0.5 1.6 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BWI76_RS22325 +0.5 1.9 hydrogenase 3 membrane subunit compare
BWI76_RS15950 +0.5 1.0 dethiobiotin synthase compare
BWI76_RS09455 +0.5 1.2 YbjN domain-containing protein compare
BWI76_RS16000 +0.5 1.0 multidrug transporter subunit MdtI compare
BWI76_RS10825 +0.5 1.9 deferrochelatase/peroxidase EfeB compare
BWI76_RS16645 +0.4 1.7 DeoR family transcriptional regulator compare
BWI76_RS26410 +0.4 1.2 membrane protein compare
BWI76_RS27820 +0.4 0.6 ilvB operon leader peptide IvbL compare
BWI76_RS13970 +0.4 1.5 ABC transporter compare
BWI76_RS27395 +0.4 2.5 hypothetical protein compare
BWI76_RS10835 +0.4 1.0 hypothetical protein compare
BWI76_RS23690 +0.4 1.1 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS16775 +0.4 2.1 malate/lactate/ureidoglycolate dehydrogenase compare
BWI76_RS00590 +0.4 1.6 hypothetical protein compare
BWI76_RS00710 +0.4 0.8 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS24820 +0.4 1.5 glycerate 2-kinase compare
BWI76_RS22200 +0.4 2.0 iron ABC transporter compare
BWI76_RS17500 +0.4 1.7 knotted carbamoyltransferase YgeW compare
BWI76_RS11920 +0.4 2.2 hypothetical protein compare
BWI76_RS10575 +0.4 0.7 polar amino acid ABC transporter permease compare
BWI76_RS06235 +0.4 1.4 PAS domain-containing sensor histidine kinase compare
BWI76_RS02655 +0.4 1.3 hypothetical protein compare
BWI76_RS20050 +0.4 1.1 hypothetical protein compare
BWI76_RS13240 +0.4 1.0 hypothetical protein compare
BWI76_RS11105 +0.4 1.3 aminodeoxychorismate lyase compare
BWI76_RS13965 +0.4 1.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS00950 +0.4 2.3 ATP-dependent protease compare
BWI76_RS19690 +0.4 1.6 LysR family transcriptional regulator compare
BWI76_RS16635 +0.4 2.7 carbonate dehydratase compare
BWI76_RS22375 +0.4 1.9 pectin acetylesterase compare
BWI76_RS09315 +0.4 1.4 hypothetical protein compare
BWI76_RS19195 +0.4 1.4 nickel ABC transporter permease compare
BWI76_RS15800 +0.4 1.9 transcriptional regulator compare
BWI76_RS10580 +0.4 2.0 amino acid ABC transporter permease compare
BWI76_RS23630 +0.4 2.9 acetoin(diacetyl) reductase compare
BWI76_RS26515 +0.4 2.6 nickel import ATP-binding protein NikD compare
BWI76_RS17835 +0.4 2.3 sugar ABC transporter permease compare
BWI76_RS24925 +0.4 1.3 DnaA initiator-associating protein DiaA compare
BWI76_RS17805 +0.4 0.8 membrane protein compare
BWI76_RS11440 +0.4 0.8 hypothetical protein compare
BWI76_RS05900 +0.4 2.0 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS06250 +0.4 1.0 alpha-glycosidase compare
BWI76_RS15940 +0.4 0.8 DMSO reductase maturation protein DsmD compare
BWI76_RS09710 +0.4 1.8 transketolase compare
BWI76_RS05045 +0.4 1.2 general secretion pathway protein GspM compare
BWI76_RS19440 +0.4 2.0 putative transporter subunit compare
BWI76_RS13095 +0.4 1.2 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS16675 +0.4 0.8 ABC transporter compare
BWI76_RS15970 +0.4 1.6 carboxypeptidase M32 compare
BWI76_RS19500 +0.4 2.1 osmoprotectant uptake system permease compare
BWI76_RS21500 +0.4 1.0 membrane protein compare
BWI76_RS06435 +0.4 2.1 MFS transporter compare
BWI76_RS05990 +0.4 1.7 branched-chain amino acid ABC transporter permease compare
BWI76_RS14970 +0.4 1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS19450 +0.4 1.9 hypothetical protein compare
BWI76_RS14950 +0.4 1.7 glycosylasparaginase compare
BWI76_RS06290 +0.4 1.2 ACP phosphodiesterase compare
BWI76_RS22240 +0.4 1.5 transcriptional regulator compare
BWI76_RS27865 +0.4 0.9 hypothetical protein compare
BWI76_RS19785 +0.4 1.5 microcin C ABC transporter permease YejB compare
BWI76_RS07860 +0.4 1.5 cytosine permease compare
BWI76_RS09730 +0.4 0.6 pyruvate formate lyase 1-activating protein compare
BWI76_RS27780 +0.4 0.7 hypothetical protein compare
BWI76_RS09390 +0.4 1.4 phage tail protein compare
BWI76_RS09280 +0.4 1.7 terminase endonuclease subunit compare
BWI76_RS01585 +0.4 1.3 transcriptional regulator compare
BWI76_RS23050 +0.4 1.1 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS08955 +0.4 2.2 23S rRNA (adenine(1618)-N(6))-methyltransferase compare
BWI76_RS17420 +0.4 1.5 hypothetical protein compare
BWI76_RS25005 +0.4 2.0 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS14770 +0.4 0.9 PTS IIA 2 domain protein compare
BWI76_RS03995 +0.4 1.7 hypothetical protein compare
BWI76_RS10565 +0.4 1.1 sugar isomerase compare
BWI76_RS21365 +0.4 2.2 tRNA (adenosine(37)-N6)-methyltransferase TrmM compare
BWI76_RS08765 +0.4 1.4 8-amino-7-oxononanoate synthase compare
BWI76_RS05570 +0.4 0.6 hypothetical protein compare
BWI76_RS06050 +0.4 2.2 MFS transporter family glucose-6-phosphate receptor UhpC compare
BWI76_RS08725 +0.4 2.1 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS24625 +0.4 1.2 hypothetical protein compare
BWI76_RS09490 +0.4 1.2 DNA-binding response regulator compare
BWI76_RS04205 +0.4 2.0 right oriC-binding transcriptional activator compare
BWI76_RS18835 +0.4 2.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
BWI76_RS23255 +0.4 1.1 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS24895 +0.4 2.3 galactitol-1-phosphate 5-dehydrogenase compare
BWI76_RS09110 +0.4 1.4 glutathione ABC transporter permease GsiD compare
BWI76_RS16925 +0.4 2.2 3-(3-hydroxyphenyl)propionate hydroxylase compare
BWI76_RS20335 +0.4 1.9 zinc transporter compare
BWI76_RS01900 +0.4 2.3 tRNA-dihydrouridine synthase A compare
BWI76_RS18270 +0.4 1.2 hypothetical protein compare
BWI76_RS24965 +0.4 1.6 SCP2 domain-containing protein compare
BWI76_RS04815 +0.4 1.0 cell division protein ZapD compare
BWI76_RS27645 +0.4 1.7 ADP-ribose pyrophosphatase compare
BWI76_RS12900 +0.4 1.4 hypothetical protein compare
BWI76_RS22455 +0.4 2.3 TonB-dependent receptor compare
BWI76_RS05920 +0.4 2.1 fimbrillin MatB compare
BWI76_RS07815 +0.4 2.2 hypothetical protein compare
BWI76_RS25000 +0.4 0.4 malonate decarboxylase acyl carrier protein compare
BWI76_RS05335 +0.4 1.4 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS12980 +0.4 1.5 AraC family transcriptional regulator compare
BWI76_RS21180 +0.3 2.5 nickel transporter compare
BWI76_RS13335 +0.3 1.6 peptidase T compare
BWI76_RS16765 +0.3 2.1 spermidine/putrescine ABC transporter permease compare
BWI76_RS14000 +0.3 1.5 glutamine amidotransferase compare
BWI76_RS10320 +0.3 2.2 alpha-glucosidase/alpha-galactosidase compare
BWI76_RS25070 +0.3 0.6 hypothetical protein compare
BWI76_RS10645 +0.3 1.2 phytanoyl-CoA dioxygenase compare
BWI76_RS05865 +0.3 1.9 ABC transporter permease compare
BWI76_RS11790 +0.3 1.3 acyl-CoA thioesterase compare


Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms