Experiment set32IT020 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -8.8 -10.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -8.3 -15.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS01210 -7.6 -5.3 tyrosine recombinase XerC compare
BWI76_RS02995 -6.9 -12.6 aspartate carbamoyltransferase compare
BWI76_RS10990 -6.5 -7.3 dihydroorotase compare
BWI76_RS15110 -5.9 -15.7 putative excinuclease ABC subunit A compare
BWI76_RS23265 -5.8 -5.5 hypothetical protein compare
BWI76_RS02530 -5.4 -3.7 tRNA dimethylallyltransferase compare
BWI76_RS05120 -5.4 -15.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09645 -5.1 -3.0 thioredoxin-disulfide reductase compare
BWI76_RS19040 -4.6 -9.8 hypothetical protein compare
BWI76_RS15115 -4.4 -5.2 MFS transporter compare
BWI76_RS09910 -4.3 -20.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS06525 -4.3 -7.5 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS19010 -3.7 -4.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS15825 -3.7 -2.2 hypothetical protein compare
BWI76_RS27385 -3.7 -9.1 orotate phosphoribosyltransferase compare
BWI76_RS23240 -3.6 -2.5 exonuclease V subunit gamma compare
BWI76_RS09660 -3.6 -2.4 DNA translocase FtsK compare
BWI76_RS11965 -3.6 -3.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01870 -3.5 -6.8 diacylglycerol kinase compare
BWI76_RS19050 -3.4 -14.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS16965 -3.4 -4.3 murein lipoprotein compare
BWI76_RS00600 -3.4 -13.0 LacI family transcriptional regulator compare
BWI76_RS19035 -3.4 -8.1 dTDP-rhamnosyl transferase compare
BWI76_RS15225 -3.2 -2.2 DeoR family transcriptional regulator compare
BWI76_RS09970 -3.1 -2.3 porin OmpA compare
BWI76_RS13915 -3.0 -9.0 magnesium transport protein MgtC compare
BWI76_RS26665 -2.9 -5.5 DNA-binding response regulator compare
BWI76_RS27430 -2.9 -1.7 (p)ppGpp synthetase compare
BWI76_RS19060 -2.8 -19.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS08525 -2.6 -4.5 colicin transporter compare
BWI76_RS19055 -2.6 -11.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS23230 -2.5 -2.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS06530 -2.4 -10.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS27390 -2.4 -4.8 ribonuclease PH compare
BWI76_RS04715 -2.4 -2.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS12170 -2.3 -8.2 hypothetical protein compare
BWI76_RS01220 -2.3 -7.6 DNA-dependent helicase II compare
BWI76_RS19845 -2.3 -8.1 phosphatase compare
BWI76_RS20650 -2.3 -2.6 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS05200 -2.2 -2.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04510 -2.2 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01325 -2.2 -3.0 twin-arginine translocase subunit TatB compare
BWI76_RS27440 -2.2 -5.5 DNA helicase RecG compare
BWI76_RS15840 -2.2 -2.2 prophage protein compare
BWI76_RS01330 -2.2 -4.8 twin-arginine translocase subunit TatC compare
BWI76_RS16260 -2.2 -3.3 two-component sensor histidine kinase compare
BWI76_RS17190 -2.1 -2.3 TonB system transport protein TonB compare
BWI76_RS13920 -2.1 -5.9 magnesium-translocating P-type ATPase compare
BWI76_RS26670 -2.1 -10.7 two-component sensor histidine kinase compare
BWI76_RS01200 -2.1 -2.4 diaminopimelate epimerase compare
BWI76_RS20355 -2.1 -5.2 colicin V production protein compare
BWI76_RS11155 -2.0 -5.2 penicillin-binding protein activator LpoB compare
BWI76_RS08530 -2.0 -3.4 protein TolA compare
BWI76_RS08535 -2.0 -3.0 translocation protein TolB compare
BWI76_RS26075 -1.9 -4.9 DNA adenine methylase compare
BWI76_RS26570 -1.9 -2.9 anion permease compare
BWI76_RS26775 -1.9 -2.9 endo-1,4-D-glucanase compare
BWI76_RS12090 -1.9 -1.1 HNH endonuclease compare
BWI76_RS26455 -1.9 -2.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS20965 -1.8 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08120 -1.8 -5.7 cobalt transporter compare
BWI76_RS17975 -1.7 -5.1 tail-specific protease compare
BWI76_RS15860 -1.7 -1.8 adenine-specific DNA methyltransferase compare
BWI76_RS08520 -1.7 -3.1 colicin transporter TolQ compare
BWI76_RS07070 -1.7 -5.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS15835 -1.7 -1.2 hypothetical protein compare
BWI76_RS20350 -1.7 -7.0 amidophosphoribosyltransferase compare
BWI76_RS21265 -1.7 -9.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS27165 -1.6 -4.4 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS12270 -1.6 -2.7 hypothetical protein compare
BWI76_RS19070 -1.6 -10.8 rhamnosyltransferase compare
BWI76_RS24280 -1.6 -5.3 biopolymer transporter ExbB compare
BWI76_RS00400 -1.6 -1.0 glutamine synthetase compare
BWI76_RS19840 -1.6 -1.9 hypothetical protein compare
BWI76_RS23480 -1.6 -8.1 EAL domain-containing protein compare
BWI76_RS01615 -1.6 -8.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS26440 -1.5 -1.9 hypothetical protein compare
BWI76_RS08385 -1.5 -3.4 citrate (Si)-synthase compare
BWI76_RS07065 -1.5 -6.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS12265 -1.5 -7.1 hypothetical protein compare
BWI76_RS27235 -1.5 -9.6 murein hydrolase activator EnvC compare
BWI76_RS20895 -1.5 -3.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS19905 -1.5 -5.7 OmpK36 porin compare
BWI76_RS26460 -1.4 -3.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26395 -1.4 -5.1 cell division protein FtsE compare
BWI76_RS15850 -1.4 -0.5 DUF1317 domain-containing protein compare
BWI76_RS24340 -1.4 -7.0 two-component sensor histidine kinase compare
BWI76_RS25920 -1.4 -2.2 peptidylprolyl isomerase compare
BWI76_RS01610 -1.4 -7.0 phosphoribosylamine--glycine ligase compare
BWI76_RS12285 -1.4 -3.3 hypothetical protein compare
BWI76_RS12255 -1.3 -9.4 hypothetical protein compare
BWI76_RS19045 -1.3 -8.0 capsular polysaccharide biosynthesis protein compare
BWI76_RS12245 -1.3 -8.8 hypothetical protein compare
BWI76_RS12195 -1.3 -2.8 hypothetical protein compare
BWI76_RS00720 -1.3 -3.2 DNA-binding response regulator compare
BWI76_RS11285 -1.3 -2.4 transcriptional regulator compare
BWI76_RS00025 -1.3 -1.4 hypothetical protein compare
BWI76_RS02735 -1.2 -3.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS26085 -1.2 -1.2 3-dehydroquinate synthase compare
BWI76_RS18200 -1.2 -4.0 copper homeostasis protein CutC compare
BWI76_RS01205 -1.2 -3.5 DUF484 family protein compare
BWI76_RS09755 -1.2 -4.8 phosphoserine transaminase compare
BWI76_RS12250 -1.2 -9.4 terminase compare
BWI76_RS16360 -1.2 -1.9 electron transport complex subunit RsxB compare
BWI76_RS12240 -1.2 -7.3 terminase small subunit compare
BWI76_RS12275 -1.2 -8.8 hypothetical protein compare
BWI76_RS25335 -1.2 -3.3 stringent starvation protein A compare
BWI76_RS12235 -1.2 -3.3 hypothetical protein compare
BWI76_RS19870 -1.1 -3.3 malate:quinone oxidoreductase compare
BWI76_RS21580 -1.1 -1.2 SsrA-binding protein compare
BWI76_RS12390 -1.1 -2.5 antibiotic biosynthesis monooxygenase compare
BWI76_RS26390 -1.1 -3.9 cell division protein FtsX compare
BWI76_RS10935 -1.1 -4.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS18065 -1.1 -2.5 DNA polymerase III subunit theta compare
BWI76_RS25060 -1.1 -3.0 lipoprotein NlpI compare
BWI76_RS04160 -1.1 -4.6 phosphoserine phosphatase compare
BWI76_RS08980 -1.1 -1.5 DNA starvation/stationary phase protection protein compare
BWI76_RS00140 -1.1 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS13595 -1.1 -2.5 transcriptional regulator compare
BWI76_RS01115 -1.1 -1.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20970 -1.0 -1.7 phosphoribosylglycinamide formyltransferase compare
BWI76_RS12185 -1.0 -2.1 hypothetical protein compare
BWI76_RS01800 -1.0 -3.7 glucose-6-phosphate isomerase compare
BWI76_RS02410 -1.0 -0.9 EF-P beta-lysylation protein EpmB compare
BWI76_RS00875 -1.0 -4.1 DNA-binding transcriptional regulator FabR compare
BWI76_RS01090 -1.0 -3.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS12345 -1.0 -2.5 nitrite transporter compare
BWI76_RS03015 -1.0 -1.5 RNase E inhibitor protein compare
BWI76_RS15830 -1.0 -1.3 hypothetical protein compare
BWI76_RS24115 -1.0 -3.8 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS27435 -1.0 -3.9 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS25065 -1.0 -2.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00180 -1.0 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS22690 -1.0 -3.1 adenylyl-sulfate kinase compare
BWI76_RS21565 -1.0 -1.2 outer membrane protein assembly factor BamE compare
BWI76_RS15685 -1.0 -2.3 hypothetical protein compare
BWI76_RS23830 -0.9 -3.7 hypothetical protein compare
BWI76_RS25425 -0.9 -1.2 arginine repressor compare
BWI76_RS21070 -0.9 -1.5 outer membrane protein assembly factor BamB compare
BWI76_RS12280 -0.9 -3.0 hypothetical protein compare
BWI76_RS04305 -0.9 -0.8 molecular chaperone DnaJ compare
BWI76_RS26200 -0.9 -3.8 starch synthase compare
BWI76_RS06535 -0.9 -3.1 endopeptidase La compare
BWI76_RS04705 -0.9 -3.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS01135 -0.9 -3.1 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00385 -0.9 -5.8 nitrogen assimilation regulatory protein compare
BWI76_RS12380 -0.9 -5.1 DNA polymerase V subunit UmuD compare
BWI76_RS18715 -0.9 -4.6 hypothetical protein compare
BWI76_RS08645 -0.9 -2.4 molybdate ABC transporter substrate-binding protein compare
BWI76_RS00390 -0.9 -4.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS15990 -0.9 -4.3 serine protease compare
BWI76_RS12350 -0.9 -5.8 kinase compare
BWI76_RS01080 -0.9 -5.9 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS12160 -0.9 -3.4 hypothetical protein compare
BWI76_RS26590 -0.9 -2.6 transcriptional regulator compare
BWI76_RS12300 -0.9 -5.4 hypothetical protein compare
BWI76_RS09030 -0.9 -3.2 transpeptidase compare
BWI76_RS11050 -0.9 -4.7 23S rRNA pseudouridine(955/2504/2580) synthase compare
BWI76_RS24025 -0.9 -4.8 agmatinase compare
BWI76_RS21000 -0.9 -4.9 exopolyphosphatase compare
BWI76_RS12260 -0.9 -3.0 hypothetical protein compare
BWI76_RS12230 -0.8 -4.6 hypothetical protein compare
BWI76_RS00355 -0.8 -2.2 DNA polymerase I compare
BWI76_RS01125 -0.8 -2.8 4-alpha-L-fucosyltransferase compare
BWI76_RS05135 -0.8 -3.2 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS12290 -0.8 -3.5 hypothetical protein compare
BWI76_RS23490 -0.8 -5.1 fimbrial protein compare
BWI76_RS15975 -0.8 -1.2 hypothetical protein compare
BWI76_RS12340 -0.8 -3.6 molecular chaperone Tir compare
BWI76_RS12320 -0.8 -4.9 hypothetical protein compare
BWI76_RS12410 -0.8 -5.2 hypothetical protein compare
BWI76_RS05140 -0.8 -2.8 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS08020 -0.8 -3.5 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS06765 -0.8 -1.9 transcriptional regulator compare
BWI76_RS05835 -0.8 -1.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS12125 -0.8 -1.3 hypothetical protein compare
BWI76_RS22650 -0.8 -3.4 lipoprotein NlpD compare
BWI76_RS12355 -0.8 -5.6 flagellar biosynthesis protein compare
BWI76_RS09860 -0.8 -3.3 hypothetical protein compare
BWI76_RS23920 -0.8 -3.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS22765 -0.8 -4.4 sulfite reductase subunit alpha compare
BWI76_RS09190 -0.8 -2.2 hypothetical protein compare
BWI76_RS18710 -0.8 -5.6 GGDEF-domain containing protein compare
BWI76_RS22640 -0.8 -1.6 hypothetical protein compare
BWI76_RS19770 -0.8 -2.0 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS12200 -0.8 -3.8 hypothetical protein compare
BWI76_RS12220 -0.8 -4.5 hypothetical protein compare
BWI76_RS21450 -0.8 -1.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS12045 -0.8 -2.3 hypothetical protein compare
BWI76_RS12135 -0.8 -3.7 C-5 cytosine-specific DNA methylase compare
BWI76_RS17720 -0.8 -0.7 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS22755 -0.8 -2.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS12305 -0.8 -4.3 hypothetical protein compare
BWI76_RS11135 -0.8 -3.0 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS05180 -0.8 -4.3 serine endoprotease DegQ compare
BWI76_RS01110 -0.7 -3.4 TDP-fucosamine acetyltransferase compare
BWI76_RS12335 -0.7 -3.8 hypothetical protein compare
BWI76_RS09655 -0.7 -2.8 leucine-responsive regulatory protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms