Experiment set32IT016 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.8X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -11.2 -7.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -8.4 -13.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS01210 -7.7 -5.3 tyrosine recombinase XerC compare
BWI76_RS02995 -7.3 -13.6 aspartate carbamoyltransferase compare
BWI76_RS09645 -6.9 -2.8 thioredoxin-disulfide reductase compare
BWI76_RS10990 -6.0 -6.8 dihydroorotase compare
BWI76_RS09910 -5.6 -17.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS27385 -4.9 -9.1 orotate phosphoribosyltransferase compare
BWI76_RS15825 -4.6 -7.1 hypothetical protein compare
BWI76_RS15110 -4.4 -16.8 putative excinuclease ABC subunit A compare
BWI76_RS23265 -4.3 -5.9 hypothetical protein compare
BWI76_RS11965 -4.2 -3.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS19010 -3.9 -4.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS07070 -3.8 -6.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS19035 -3.7 -9.2 dTDP-rhamnosyl transferase compare
BWI76_RS15115 -3.6 -6.8 MFS transporter compare
BWI76_RS09660 -3.5 -2.4 DNA translocase FtsK compare
BWI76_RS27390 -3.4 -7.0 ribonuclease PH compare
BWI76_RS23240 -3.4 -3.2 exonuclease V subunit gamma compare
BWI76_RS19040 -3.3 -9.2 hypothetical protein compare
BWI76_RS15225 -3.2 -3.3 DeoR family transcriptional regulator compare
BWI76_RS00600 -3.2 -9.6 LacI family transcriptional regulator compare
BWI76_RS13915 -3.1 -6.8 magnesium transport protein MgtC compare
BWI76_RS20350 -3.0 -9.3 amidophosphoribosyltransferase compare
BWI76_RS20965 -2.9 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS02530 -2.7 -3.2 tRNA dimethylallyltransferase compare
BWI76_RS21265 -2.7 -11.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01610 -2.7 -11.2 phosphoribosylamine--glycine ligase compare
BWI76_RS19050 -2.6 -12.1 NAD(P)-dependent oxidoreductase compare
BWI76_RS01615 -2.6 -11.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS15840 -2.5 -2.5 prophage protein compare
BWI76_RS20895 -2.5 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS13920 -2.5 -6.4 magnesium-translocating P-type ATPase compare
BWI76_RS07065 -2.4 -8.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS19060 -2.3 -15.9 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19055 -2.3 -12.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS26075 -2.3 -4.3 DNA adenine methylase compare
BWI76_RS23230 -2.2 -2.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS06525 -2.2 -8.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS20970 -2.1 -2.5 phosphoribosylglycinamide formyltransferase compare
BWI76_RS01205 -2.0 -4.5 DUF484 family protein compare
BWI76_RS02735 -1.9 -4.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS15860 -1.9 -2.0 adenine-specific DNA methyltransferase compare
BWI76_RS23920 -1.8 -4.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04160 -1.8 -5.4 phosphoserine phosphatase compare
BWI76_RS06530 -1.8 -5.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS21310 -1.7 -1.9 DNA repair protein RecO compare
BWI76_RS12090 -1.7 -1.3 HNH endonuclease compare
BWI76_RS20355 -1.7 -2.4 colicin V production protein compare
BWI76_RS26620 -1.7 -1.5 Fe-S biogenesis protein NfuA compare
BWI76_RS08535 -1.7 -2.9 translocation protein TolB compare
BWI76_RS15850 -1.6 -0.6 DUF1317 domain-containing protein compare
BWI76_RS00400 -1.6 -1.0 glutamine synthetase compare
BWI76_RS09755 -1.6 -3.5 phosphoserine transaminase compare
BWI76_RS01220 -1.6 -6.8 DNA-dependent helicase II compare
BWI76_RS14075 -1.6 -2.3 TetR family transcriptional regulator compare
BWI76_RS05120 -1.5 -10.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS12265 -1.5 -5.6 hypothetical protein compare
BWI76_RS20650 -1.4 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26085 -1.4 -1.4 3-dehydroquinate synthase compare
BWI76_RS13595 -1.4 -3.8 transcriptional regulator compare
BWI76_RS09655 -1.4 -4.5 leucine-responsive regulatory protein compare
BWI76_RS12270 -1.3 -4.7 hypothetical protein compare
BWI76_RS26775 -1.3 -3.2 endo-1,4-D-glucanase compare
BWI76_RS12255 -1.3 -9.1 hypothetical protein compare
BWI76_RS15830 -1.3 -1.6 hypothetical protein compare
BWI76_RS12240 -1.3 -6.5 terminase small subunit compare
BWI76_RS26425 -1.3 -8.0 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS15835 -1.2 -1.0 hypothetical protein compare
BWI76_RS06535 -1.2 -3.1 endopeptidase La compare
BWI76_RS19070 -1.2 -7.3 rhamnosyltransferase compare
BWI76_RS20380 -1.1 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS02410 -1.1 -1.0 EF-P beta-lysylation protein EpmB compare
BWI76_RS25425 -1.1 -1.4 arginine repressor compare
BWI76_RS12550 -1.1 -1.8 hypothetical protein compare
BWI76_RS25920 -1.1 -2.0 peptidylprolyl isomerase compare
BWI76_RS04715 -1.1 -1.8 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS08750 -1.1 -1.6 kinase inhibitor compare
BWI76_RS12145 -1.1 -2.1 hypothetical protein compare
BWI76_RS12195 -1.0 -3.3 hypothetical protein compare
BWI76_RS09635 -1.0 -1.3 amino acid ABC transporter ATP-binding protein compare
BWI76_RS12250 -1.0 -7.3 terminase compare
BWI76_RS25870 -1.0 -1.5 elongation factor Tu compare
BWI76_RS27915 -1.0 -2.0 YceK/YidQ family lipoprotein compare
BWI76_RS26665 -1.0 -3.4 DNA-binding response regulator compare
BWI76_RS11155 -1.0 -2.5 penicillin-binding protein activator LpoB compare
BWI76_RS01200 -1.0 -1.4 diaminopimelate epimerase compare
BWI76_RS12170 -1.0 -1.5 hypothetical protein compare
BWI76_RS21580 -1.0 -1.2 SsrA-binding protein compare
BWI76_RS12275 -1.0 -5.4 hypothetical protein compare
BWI76_RS03010 -1.0 -6.6 ornithine carbamoyltransferase compare
BWI76_RS04510 -1.0 -0.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS04530 -1.0 -1.2 peptidylprolyl isomerase SurA compare
BWI76_RS00720 -1.0 -2.8 DNA-binding response regulator compare
BWI76_RS27440 -0.9 -2.3 DNA helicase RecG compare
BWI76_RS19905 -0.9 -5.1 OmpK36 porin compare
BWI76_RS12245 -0.9 -5.1 hypothetical protein compare
BWI76_RS25115 -0.9 -4.5 argininosuccinate synthase compare
BWI76_RS03015 -0.9 -1.8 RNase E inhibitor protein compare
BWI76_RS04525 -0.9 -2.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS23220 -0.9 -6.1 amino-acid N-acetyltransferase compare
BWI76_RS19840 -0.9 -1.3 hypothetical protein compare
BWI76_RS18200 -0.9 -5.0 copper homeostasis protein CutC compare
BWI76_RS14825 -0.9 -1.5 dienelactone hydrolase family protein compare
BWI76_RS08980 -0.9 -1.2 DNA starvation/stationary phase protection protein compare
BWI76_RS00845 -0.9 -3.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS21370 -0.9 -1.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS27430 -0.9 -0.8 (p)ppGpp synthetase compare
BWI76_RS26570 -0.9 -1.9 anion permease compare
BWI76_RS15705 -0.9 -3.1 putative holin protein compare
BWI76_RS26000 -0.9 -3.6 aspartate aminotransferase family protein compare
BWI76_RS12115 -0.8 -4.9 hypothetical protein compare
BWI76_RS12220 -0.8 -5.7 hypothetical protein compare
BWI76_RS12320 -0.8 -5.3 hypothetical protein compare
BWI76_RS08120 -0.8 -2.7 cobalt transporter compare
BWI76_RS01870 -0.8 -3.4 diacylglycerol kinase compare
BWI76_RS24115 -0.8 -2.9 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS12345 -0.8 -2.4 nitrite transporter compare
BWI76_RS12380 -0.8 -3.5 DNA polymerase V subunit UmuD compare
BWI76_RS15690 -0.8 -2.6 hypothetical protein compare
BWI76_RS20435 -0.8 -1.2 chorismate synthase compare
BWI76_RS01000 -0.8 -1.8 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS05200 -0.8 -1.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS27435 -0.8 -2.6 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS22755 -0.8 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS21445 -0.8 -2.1 hypothetical protein compare
BWI76_RS07780 -0.8 -1.1 hypothetical protein compare
BWI76_RS15920 -0.8 -1.3 hypothetical protein compare
BWI76_RS09190 -0.8 -1.5 hypothetical protein compare
BWI76_RS05450 -0.8 -1.1 ribonuclease HI compare
BWI76_RS15745 -0.8 -2.6 hypothetical protein compare
BWI76_RS12385 -0.8 -4.6 DNA polymerase V subunit UmuC compare
BWI76_RS19045 -0.7 -4.3 capsular polysaccharide biosynthesis protein compare
BWI76_RS12285 -0.7 -2.6 hypothetical protein compare
BWI76_RS23915 -0.7 -2.1 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS24575 -0.7 -1.0 hypothetical protein compare
BWI76_RS14390 -0.7 -0.7 hypothetical protein compare
BWI76_RS23015 -0.7 -1.3 cobalt transporter ATP-binding subunit compare
BWI76_RS12340 -0.7 -2.7 molecular chaperone Tir compare
BWI76_RS26670 -0.7 -5.8 two-component sensor histidine kinase compare
BWI76_RS10935 -0.7 -3.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21070 -0.7 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS12360 -0.7 -4.1 hypothetical protein compare
BWI76_RS12260 -0.7 -2.9 hypothetical protein compare
BWI76_RS06340 -0.7 -1.0 hypothetical protein compare
BWI76_RS03300 -0.7 -2.2 hypothetical protein compare
BWI76_RS00390 -0.7 -3.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS23125 -0.7 -1.6 propanediol dehydratase small subunit compare
BWI76_RS02815 -0.7 -1.6 fructose-bisphosphatase class I compare
BWI76_RS17325 -0.7 -3.1 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS12390 -0.7 -2.2 antibiotic biosynthesis monooxygenase compare
BWI76_RS25960 -0.7 -1.9 NUDIX hydrolase compare
BWI76_RS00010 -0.7 -3.9 DNA replication and repair protein RecF compare
BWI76_RS12225 -0.7 -1.5 hypothetical protein compare
BWI76_RS12895 -0.7 -1.9 hypothetical protein compare
BWI76_RS12160 -0.7 -2.5 hypothetical protein compare
BWI76_RS00240 -0.7 -1.9 FMN-binding protein MioC compare
BWI76_RS16360 -0.7 -1.2 electron transport complex subunit RsxB compare
BWI76_RS14225 -0.7 -2.1 anti-ECF sigma factor ChrR compare
BWI76_RS21390 -0.7 -2.5 thiol disulfide reductase thioredoxin compare
BWI76_RS12085 -0.7 -1.4 regulatory protein CII from bacteriophage origin compare
BWI76_RS01775 -0.7 -1.0 hypothetical protein compare
BWI76_RS08310 -0.7 -1.9 potassium-transporting ATPase subunit C compare
BWI76_RS24100 -0.7 -1.8 YggS family pyridoxal phosphate enzyme compare
BWI76_RS14765 -0.7 -2.2 PTS lactose/cellobiose transporter subunit IIB compare
BWI76_RS00855 -0.7 -3.3 argininosuccinate lyase compare
BWI76_RS12300 -0.7 -4.6 hypothetical protein compare
BWI76_RS16240 -0.7 -2.0 anti-adapter protein IraM compare
BWI76_RS23875 -0.7 -2.2 glycine cleavage system protein H compare
BWI76_RS12375 -0.7 -2.5 DNA-invertase hin compare
BWI76_RS21115 -0.6 -2.1 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS12135 -0.6 -3.8 C-5 cytosine-specific DNA methylase compare
BWI76_RS12205 -0.6 -3.7 hypothetical protein compare
BWI76_RS26890 -0.6 -1.0 hypothetical protein compare
BWI76_RS12215 -0.6 -2.8 HNH endonuclease compare
BWI76_RS18130 -0.6 -1.7 zinc ABC transporter substrate-binding protein compare
BWI76_RS19995 -0.6 -1.4 IclR family transcriptional regulator compare
BWI76_RS03080 -0.6 -1.9 (Fe-S)-cluster assembly protein compare
BWI76_RS19575 -0.6 -1.4 maleylacetoacetate isomerase compare
BWI76_RS12035 -0.6 -3.9 hypothetical protein compare
BWI76_RS08385 -0.6 -1.1 citrate (Si)-synthase compare
BWI76_RS12110 -0.6 -3.6 hypothetical protein compare
BWI76_RS08315 -0.6 -1.3 K+-transporting ATPase subunit B compare
BWI76_RS15410 -0.6 -1.4 N-acetyltransferase compare
BWI76_RS06475 -0.6 -1.3 protoheme IX farnesyltransferase compare
BWI76_RS12400 -0.6 -3.2 TetR family transcriptional regulator compare
BWI76_RS19585 -0.6 -0.9 gentisate 1,2-dioxygenase compare
BWI76_RS23805 -0.6 -4.3 ssDNA exonuclease RecJ compare
BWI76_RS19845 -0.6 -2.8 phosphatase compare
BWI76_RS12350 -0.6 -4.3 kinase compare
BWI76_RS03295 -0.6 -1.5 transposase compare
BWI76_RS19710 -0.6 -1.8 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS04145 -0.6 -2.0 purine-nucleoside phosphorylase compare
BWI76_RS15060 -0.6 -2.0 MarR family transcriptional regulator compare
BWI76_RS25060 -0.6 -2.4 lipoprotein NlpI compare
BWI76_RS02800 -0.6 -2.2 ABC transporter compare
BWI76_RS16335 -0.6 -1.2 division septum protein Blr compare
BWI76_RS13435 -0.6 -1.1 hypothetical protein compare
BWI76_RS15730 -0.6 -2.1 hypothetical protein compare
BWI76_RS12290 -0.6 -2.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms