Experiment set32IT016 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.8X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS09970 +1.3 2.7 porin OmpA compare
BWI76_RS17975 +1.3 5.4 tail-specific protease compare
BWI76_RS21740 +1.1 2.5 transcriptional regulator, LysR family protein compare
BWI76_RS02180 +1.1 1.9 hypothetical protein compare
BWI76_RS11820 +1.0 2.4 short-chain dehydrogenase/reductase SDR compare
BWI76_RS25000 +1.0 2.3 malonate decarboxylase acyl carrier protein compare
BWI76_RS04305 +1.0 1.4 molecular chaperone DnaJ compare
BWI76_RS01540 +0.9 2.0 thiamine biosynthesis protein ThiS compare
BWI76_RS13030 +0.9 2.2 site-specific recombinase, phage integrase family protein compare
BWI76_RS27820 +0.9 1.7 ilvB operon leader peptide IvbL compare
BWI76_RS08840 +0.9 1.3 hypothetical protein compare
BWI76_RS00715 +0.9 2.5 two-component sensor histidine kinase compare
BWI76_RS09530 +0.9 1.8 hypothetical protein compare
BWI76_RS16965 +0.9 1.9 murein lipoprotein compare
BWI76_RS26405 +0.8 1.7 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS07465 +0.8 1.9 TetR family transcriptional regulator compare
BWI76_RS00345 +0.8 3.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS01885 +0.8 1.7 CsbD family protein compare
BWI76_RS21345 +0.8 1.4 sigma-E factor regulatory protein RseB compare
BWI76_RS11610 +0.8 2.0 glutamate dehydrogenase compare
BWI76_RS03995 +0.8 3.0 hypothetical protein compare
BWI76_RS13625 +0.7 3.0 hypothetical protein compare
BWI76_RS09420 +0.7 2.2 hypothetical protein compare
BWI76_RS20795 +0.7 1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS24955 +0.7 1.0 hypothetical protein compare
BWI76_RS13965 +0.7 2.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS11335 +0.6 1.3 tautomerase compare
BWI76_RS21075 +0.6 1.6 membrane protein compare
BWI76_RS21810 +0.6 1.2 universal stress protein compare
BWI76_RS19700 +0.6 2.3 deoxyribonuclease IV compare
BWI76_RS12780 +0.6 1.0 hypothetical protein compare
BWI76_RS07595 +0.6 1.8 putative oxidoreductase compare
BWI76_RS11895 +0.6 2.1 AraC family transcriptional regulator compare
BWI76_RS05570 +0.6 1.1 hypothetical protein compare
BWI76_RS17470 +0.6 1.3 MerR family transcriptional regulator compare
BWI76_RS02440 +0.6 1.5 fumarate reductase subunit D compare
BWI76_RS16025 +0.6 1.0 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS24525 +0.6 2.2 urease accessory protein UreG compare
BWI76_RS06190 +0.6 2.0 hypothetical protein compare
BWI76_RS16030 +0.6 1.2 malonate decarboxylase acyl carrier protein compare
BWI76_RS17665 +0.6 1.9 proteasome-type protease compare
BWI76_RS12495 +0.6 1.6 2-Cys peroxiredoxin compare
BWI76_RS12700 +0.6 2.7 hypothetical protein compare
BWI76_RS09515 +0.6 1.9 arginine ABC transporter substrate-binding protein compare
BWI76_RS16515 +0.6 1.1 LysR family transcriptional regulator compare
BWI76_RS12755 +0.6 2.6 hypothetical protein compare
BWI76_RS16755 +0.6 2.6 acetoin reductase compare
BWI76_RS20720 +0.6 1.5 hypothetical protein compare
BWI76_RS07760 +0.6 1.8 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS20150 +0.6 1.0 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS18385 +0.6 1.0 hypothetical protein compare
BWI76_RS08605 +0.6 1.5 phosphoglyceromutase compare
BWI76_RS16910 +0.6 2.1 2-keto-4-pentenoate hydratase compare
BWI76_RS02225 +0.6 1.3 phosphonate C-P lyase system protein PhnG compare
BWI76_RS09390 +0.6 2.9 phage tail protein compare
BWI76_RS17875 +0.6 2.3 L-serine ammonia-lyase compare
BWI76_RS23970 +0.5 1.9 mechanosensitive ion channel protein MscS compare
BWI76_RS09220 +0.5 2.0 hypothetical protein compare
BWI76_RS08580 +0.5 1.8 quinolinate synthetase compare
BWI76_RS13560 +0.5 0.9 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS12420 +0.5 1.0 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS20490 +0.5 1.4 hypothetical protein compare
BWI76_RS07350 +0.5 2.1 alcohol dehydrogenase compare
BWI76_RS06130 +0.5 1.8 extensin family protein compare
BWI76_RS05015 +0.5 1.4 transcriptional regulator compare
BWI76_RS13015 +0.5 3.2 LysR family transcriptional regulator compare
BWI76_RS04515 +0.5 1.1 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS22880 +0.5 3.0 L-serine ammonia-lyase compare
BWI76_RS02680 +0.5 1.7 EamA family transporter compare
BWI76_RS11835 +0.5 1.0 putative regulatory protein MarR compare
BWI76_RS13095 +0.5 1.1 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS07860 +0.5 1.4 cytosine permease compare
BWI76_RS04565 +0.5 1.9 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS10735 +0.5 1.8 hypothetical protein compare
BWI76_RS16455 +0.5 1.6 superoxide dismutase compare
BWI76_RS13025 +0.5 1.2 histidine phosphatase family protein compare
BWI76_RS01585 +0.5 2.3 transcriptional regulator compare
BWI76_RS07255 +0.5 1.0 hypothetical protein compare
BWI76_RS17955 +0.5 1.5 hypothetical protein compare
BWI76_RS07730 +0.5 1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS24180 +0.5 1.6 hypothetical protein compare
BWI76_RS14735 +0.5 1.8 type 11 methyltransferase compare
BWI76_RS07470 +0.5 1.5 MBL fold metallo-hydrolase compare
BWI76_RS18955 +0.5 2.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS21395 +0.5 1.8 DTW domain-containing protein compare
BWI76_RS11600 +0.5 2.1 selenide, water dikinase SelD compare
BWI76_RS01185 +0.5 0.7 adenylate cyclase compare
BWI76_RS27945 +0.5 1.2 2-oxo-3-deoxygalactonate kinase compare
BWI76_RS24260 +0.5 1.3 hypothetical protein compare
BWI76_RS00885 +0.5 1.7 tRNA (uridine(54)-C5)-methyltransferase TrmA compare
BWI76_RS09155 +0.5 1.6 undecaprenyl-diphosphatase compare
BWI76_RS17765 +0.5 1.8 hypothetical protein compare
BWI76_RS06540 +0.5 1.5 DNA-binding protein HU-beta compare
BWI76_RS06435 +0.5 1.0 MFS transporter compare
BWI76_RS14815 +0.5 2.5 MdaB protein compare
BWI76_RS16075 +0.5 1.0 oxidoreductase compare
BWI76_RS14305 +0.5 1.9 metallophosphoesterase compare
BWI76_RS13785 +0.5 0.8 ABC transporter permease compare
BWI76_RS09195 +0.5 1.0 N-acetyltransferase compare
BWI76_RS15095 +0.5 1.9 isochorismatase compare
BWI76_RS20135 +0.4 1.7 NADH-quinone oxidoreductase subunit M compare
BWI76_RS09680 +0.4 2.7 dimethyl sulfoxide reductase subunit A compare
BWI76_RS13050 +0.4 1.3 transcriptional regulator compare
BWI76_RS21275 +0.4 2.0 lytic transglycosylase F compare
BWI76_RS11430 +0.4 0.7 lipoprotein compare
BWI76_RS09450 +0.4 1.4 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS20940 +0.4 1.0 uracil/xanthine transporter compare
BWI76_RS13895 +0.4 1.9 LysR family transcriptional regulator compare
BWI76_RS11060 +0.4 1.3 septum formation inhibitor Maf compare
BWI76_RS21220 +0.4 1.5 membrane protein compare
BWI76_RS21015 +0.4 1.9 LysR family transcriptional regulator compare
BWI76_RS04600 +0.4 2.1 inner membrane protein compare
BWI76_RS14505 +0.4 1.7 salicylate synthase Irp9 compare
BWI76_RS09025 +0.4 0.7 GntR family transcriptional regulator compare
BWI76_RS12885 +0.4 1.5 hypothetical protein compare
BWI76_RS04605 +0.4 0.9 thiamine ABC transporter ATP-binding protein compare
BWI76_RS16370 +0.4 2.2 electron transport complex subunit D compare
BWI76_RS24030 +0.4 3.1 arginine decarboxylase compare
BWI76_RS08405 +0.4 1.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS26300 +0.4 1.8 glycerol-3-phosphate transporter permease compare
BWI76_RS02200 +0.4 1.6 phosphonate C-P lyase system protein PhnL compare
BWI76_RS23360 +0.4 1.3 diaminopimelate decarboxylase compare
BWI76_RS12055 +0.4 2.5 DNA single-strand annealing protein RecT-like protein compare
BWI76_RS02685 +0.4 1.4 opacity-associated protein compare
BWI76_RS18195 +0.4 1.0 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
BWI76_RS19215 +0.4 1.0 proline-specific peptidase compare
BWI76_RS16330 +0.4 1.7 oxidoreductase compare
BWI76_RS05070 +0.4 0.7 type II secretion system protein GspH compare
BWI76_RS21090 +0.4 0.8 cytoskeletal protein RodZ compare
BWI76_RS20610 +0.4 1.8 LysR family transcriptional regulator compare
BWI76_RS17240 +0.4 2.0 oligopeptide ABC transporter substrate-binding protein OppA compare
BWI76_RS26285 +0.4 1.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS24275 +0.4 1.5 biopolymer transport protein ExbD compare
BWI76_RS11790 +0.4 1.5 acyl-CoA thioesterase compare
BWI76_RS05165 +0.4 1.9 cobalamin-binding protein compare
BWI76_RS16675 +0.4 0.6 ABC transporter compare
BWI76_RS19190 +0.4 2.6 oligopeptide/dipeptide ABC transporter ATPase compare
BWI76_RS19480 +0.4 1.6 transcriptional regulator compare
BWI76_RS16120 +0.4 1.1 4-carboxymuconolactone decarboxylase compare
BWI76_RS14365 +0.4 2.4 transcriptional regulator compare
BWI76_RS24910 +0.4 2.0 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS05520 +0.4 1.3 hypothetical protein compare
BWI76_RS20395 +0.4 1.6 flagella biosynthesis regulator compare
BWI76_RS26290 +0.4 1.6 glycerol-3-phosphate ABC transporter ATP-binding protein compare
BWI76_RS10975 +0.4 1.7 N-methyltryptophan oxidase compare
BWI76_RS25070 +0.4 0.7 hypothetical protein compare
BWI76_RS16920 +0.4 1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS08260 +0.4 1.7 LysR family transcriptional regulator compare
BWI76_RS17315 +0.4 1.6 EamA family transporter compare
BWI76_RS16250 +0.4 1.9 DNA-binding response regulator compare
BWI76_RS05480 +0.4 2.6 class II glutamine amidotransferase compare
BWI76_RS10825 +0.4 2.6 deferrochelatase/peroxidase EfeB compare
BWI76_RS15775 +0.4 1.4 replication protein compare
BWI76_RS22405 +0.4 2.6 PTS cellobiose transporter subunit IIC compare
BWI76_RS19130 +0.4 1.7 3-methyladenine DNA glycosylase 2 compare
BWI76_RS13860 +0.4 2.3 hypothetical protein compare
BWI76_RS20335 +0.4 1.9 zinc transporter compare
BWI76_RS23420 +0.4 1.9 LacI family transcriptional regulator compare
BWI76_RS26125 +0.4 2.4 carboxypeptidase/penicillin-binding protein 1A compare
BWI76_RS21695 +0.4 2.4 glycosyl transferase family protein compare
BWI76_RS19530 +0.4 1.4 YIP1 family protein compare
BWI76_RS15390 +0.4 2.0 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
BWI76_RS19440 +0.4 2.4 putative transporter subunit compare
BWI76_RS00480 +0.4 1.0 hypothetical protein compare
BWI76_RS16510 +0.4 2.0 transcriptional repressor PurR compare
BWI76_RS24495 +0.4 1.8 urease accessory protein compare
BWI76_RS05515 +0.4 1.0 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS22805 +0.4 2.9 GTP diphosphokinase compare
BWI76_RS00075 +0.4 1.3 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS11710 +0.4 1.8 nucleotide excision repair endonuclease compare
BWI76_RS18550 +0.4 1.0 tRNA-Asn compare
BWI76_RS23690 +0.4 1.1 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS21105 +0.4 1.7 penicillin-binding protein 1C compare
BWI76_RS02595 +0.4 1.8 hypothetical protein compare
BWI76_RS16085 +0.4 1.5 two-component system sensor histidine kinase DcuS compare
BWI76_RS16555 +0.4 1.5 hypothetical protein compare
BWI76_RS11780 +0.4 1.3 2-deoxyglucose-6-phosphatase compare
BWI76_RS09690 +0.4 0.7 dimethyl sulfoxide reductase compare
BWI76_RS20760 +0.4 1.5 ethanolamine ammonia-lyase small subunit compare
BWI76_RS09750 +0.4 2.3 DUF421 domain-containing protein compare
BWI76_RS18190 +0.4 0.9 carboxy-S-adenosyl-L-methionine synthase CmoA compare
BWI76_RS12535 +0.4 1.7 hypothetical protein compare
BWI76_RS26910 +0.4 2.5 hypothetical protein compare
BWI76_RS16470 +0.4 0.9 transcriptional repressor NemR compare
BWI76_RS04995 +0.4 1.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
BWI76_RS24040 +0.4 1.3 hypothetical protein compare
BWI76_RS12520 +0.4 1.3 hypothetical protein compare
BWI76_RS00590 +0.4 2.0 hypothetical protein compare
BWI76_RS15045 +0.4 1.9 LysR family transcriptional regulator compare
BWI76_RS01190 +0.4 1.1 iron donor protein CyaY compare
BWI76_RS06935 +0.4 1.4 co-chaperone YbbN compare
BWI76_RS15315 +0.4 1.7 DNA-binding protein compare
BWI76_RS03170 +0.4 1.6 hypothetical protein compare
BWI76_RS07905 +0.4 2.4 trimethylamine-N-oxide reductase (cytochrome c) compare
BWI76_RS14200 +0.4 1.7 protocatechuate 4,5-dioxygenase compare
BWI76_RS14065 +0.4 0.6 hypothetical protein compare
BWI76_RS10320 +0.4 2.2 alpha-glucosidase/alpha-galactosidase compare
BWI76_RS04060 +0.4 0.7 hypothetical protein compare
BWI76_RS13505 +0.4 2.0 putative receptor compare
BWI76_RS07165 +0.4 1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms