Experiment set32IT014 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.8X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS09970 +2.2 7.4 porin OmpA compare
BWI76_RS22805 +2.2 18.0 GTP diphosphokinase compare
BWI76_RS16965 +1.8 6.6 murein lipoprotein compare
BWI76_RS05015 +1.7 6.6 transcriptional regulator compare
BWI76_RS21075 +1.5 2.9 membrane protein compare
BWI76_RS01585 +1.4 9.2 transcriptional regulator compare
BWI76_RS00345 +1.3 5.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS00715 +1.1 3.8 two-component sensor histidine kinase compare
BWI76_RS14415 +1.1 2.1 transcriptional regulator, TetR family protein compare
BWI76_RS02180 +1.1 2.3 hypothetical protein compare
BWI76_RS21350 +1.1 4.1 anti-RNA polymerase sigma factor SigE compare
BWI76_RS01540 +1.0 2.1 thiamine biosynthesis protein ThiS compare
BWI76_RS26395 +1.0 4.0 cell division protein FtsE compare
BWI76_RS23895 +1.0 1.2 Xaa-Pro aminopeptidase compare
BWI76_RS22810 +1.0 2.7 23S rRNA (uracil(1939)-C(5))-methyltransferase compare
BWI76_RS17615 +1.0 1.3 RNA pseudouridine synthase compare
BWI76_RS20720 +1.0 2.4 hypothetical protein compare
BWI76_RS01185 +1.0 2.6 adenylate cyclase compare
BWI76_RS05235 +1.0 1.4 hypothetical protein compare
BWI76_RS21475 +1.0 5.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS15845 +0.9 1.7 hypothetical protein compare
BWI76_RS05260 +0.9 2.6 chaperone compare
BWI76_RS25335 +0.9 2.7 stringent starvation protein A compare
BWI76_RS16895 +0.9 1.8 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS19770 +0.9 2.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS11275 +0.9 6.5 sensor protein PhoQ compare
BWI76_RS09690 +0.9 2.5 dimethyl sulfoxide reductase compare
BWI76_RS04250 +0.8 4.3 homoserine kinase compare
BWI76_RS01195 +0.8 1.1 membrane protein compare
BWI76_RS17975 +0.8 2.6 tail-specific protease compare
BWI76_RS08210 +0.8 1.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS04245 +0.8 6.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS24460 +0.8 4.7 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase compare
BWI76_RS17665 +0.8 2.3 proteasome-type protease compare
BWI76_RS06520 +0.8 4.9 trigger factor compare
BWI76_RS07185 +0.8 1.3 hypothetical protein compare
BWI76_RS26405 +0.8 1.5 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS18605 +0.8 1.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS04255 +0.8 6.1 threonine synthase compare
BWI76_RS08980 +0.8 1.6 DNA starvation/stationary phase protection protein compare
BWI76_RS27290 +0.8 4.1 hypothetical protein compare
BWI76_RS01620 +0.8 2.1 hypothetical protein compare
BWI76_RS09760 +0.8 3.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS08405 +0.8 1.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS18930 +0.7 5.0 histidinol-phosphate transaminase compare
BWI76_RS00140 +0.7 1.0 phosphate transport system regulator PhoU compare
BWI76_RS26390 +0.7 2.8 cell division protein FtsX compare
BWI76_RS24945 +0.7 1.3 glutamine amidotransferase compare
BWI76_RS06800 +0.7 1.4 DUF2496 domain-containing protein compare
BWI76_RS06545 +0.7 2.1 peptidylprolyl isomerase compare
BWI76_RS07465 +0.7 1.2 TetR family transcriptional regulator compare
BWI76_RS18940 +0.7 3.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS13125 +0.7 1.6 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS01280 +0.7 4.4 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS24340 +0.7 5.2 two-component sensor histidine kinase compare
BWI76_RS11515 +0.7 1.5 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS04240 +0.7 1.3 thr operon leader peptide compare
BWI76_RS19935 +0.7 1.8 hypothetical protein compare
BWI76_RS26890 +0.7 1.2 hypothetical protein compare
BWI76_RS20900 +0.7 1.6 outer membrane protein assembly factor BamC compare
BWI76_RS25480 +0.7 1.9 ribonuclease E/G compare
BWI76_RS07785 +0.7 1.4 transcriptional regulator compare
BWI76_RS08020 +0.7 3.1 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS03665 +0.7 1.1 ABC transporter ATP-binding protein compare
BWI76_RS17400 +0.7 1.3 transporter compare
BWI76_RS07460 +0.7 2.2 hypothetical protein compare
BWI76_RS07970 +0.7 1.7 hypothetical protein compare
BWI76_RS17470 +0.7 2.5 MerR family transcriptional regulator compare
BWI76_RS27305 +0.6 3.7 glycosyl transferase compare
BWI76_RS18955 +0.6 4.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18190 +0.6 2.6 carboxy-S-adenosyl-L-methionine synthase CmoA compare
BWI76_RS27425 +0.6 1.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS21235 +0.6 1.2 hypothetical protein compare
BWI76_RS06730 +0.6 2.3 lac repressor compare
BWI76_RS26005 +0.6 1.8 glutamine amidotransferase compare
BWI76_RS06190 +0.6 1.4 hypothetical protein compare
BWI76_RS11335 +0.6 1.2 tautomerase compare
BWI76_RS05350 +0.6 4.4 Rcs stress response system protein RcsF compare
BWI76_RS12470 +0.6 1.4 thiosulfate sulfurtransferase PspE compare
BWI76_RS09255 +0.6 1.9 hypothetical protein compare
BWI76_RS23120 +0.6 1.0 propanediol dehydratase medium subunit compare
BWI76_RS18920 +0.6 1.4 ATP phosphoribosyltransferase compare
BWI76_RS07645 +0.6 1.6 short-chain dehydrogenase/reductase compare
BWI76_RS04815 +0.6 1.7 cell division protein ZapD compare
BWI76_RS23455 +0.6 1.6 Na(+)-translocating NADH-quinone reductase subunit E compare
BWI76_RS22645 +0.6 3.0 RNA polymerase sigma factor RpoS compare
BWI76_RS19615 +0.6 1.7 vancomycin high temperature exclusion protein compare
BWI76_RS11635 +0.6 1.5 ABC transporter compare
BWI76_RS01275 +0.6 2.8 LysR family transcriptional regulator compare
BWI76_RS27395 +0.6 1.4 hypothetical protein compare
BWI76_RS19310 +0.6 1.4 ABC transporter permease compare
BWI76_RS07975 +0.6 2.6 phospholipid:lipid A palmitoyltransferase compare
BWI76_RS27605 +0.6 1.4 hypothetical protein compare
BWI76_RS11255 +0.6 1.1 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS17530 +0.6 1.5 hypothetical protein compare
BWI76_RS27460 +0.6 1.8 hypothetical protein compare
BWI76_RS13170 +0.6 2.4 methyltransferase compare
BWI76_RS16025 +0.6 0.9 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS27890 +0.6 1.9 GntR family transcriptional regulator compare
BWI76_RS19375 +0.6 1.5 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS21980 +0.6 1.4 hypothetical protein compare
BWI76_RS27235 +0.6 3.6 murein hydrolase activator EnvC compare
BWI76_RS09470 +0.6 2.0 putrescine ABC transporter permease compare
BWI76_RS16515 +0.5 0.9 LysR family transcriptional regulator compare
BWI76_RS11150 +0.5 1.4 membrane protein compare
BWI76_RS16570 +0.5 2.6 catalase compare
BWI76_RS06335 +0.5 2.0 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS15095 +0.5 2.0 isochorismatase compare
BWI76_RS00805 +0.5 3.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS14065 +0.5 1.2 hypothetical protein compare
BWI76_RS16950 +0.5 1.9 TetR family transcriptional regulator compare
BWI76_RS15190 +0.5 2.5 GGDEF domain-containing protein compare
BWI76_RS00380 +0.5 3.3 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS11950 +0.5 1.7 phosphatidylglycerophosphatase B compare
BWI76_RS02050 +0.5 1.3 CidA/LrgA family protein compare
BWI76_RS08500 +0.5 1.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS04010 +0.5 2.4 hypothetical protein compare
BWI76_RS21480 +0.5 3.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS19215 +0.5 1.2 proline-specific peptidase compare
BWI76_RS16555 +0.5 1.5 hypothetical protein compare
BWI76_RS19750 +0.5 1.9 elongation factor P-like protein YeiP compare
BWI76_RS00970 +0.5 2.1 branched chain amino acid aminotransferase compare
BWI76_RS12680 +0.5 0.9 oxidoreductase compare
BWI76_RS19685 +0.5 2.1 lysine transporter compare
BWI76_RS02585 +0.5 1.6 hypothetical protein compare
BWI76_RS15260 +0.5 1.2 hypothetical protein compare
BWI76_RS18615 +0.5 2.8 glutathione S-transferase domain protein compare
BWI76_RS24745 +0.5 2.5 membrane protein compare
BWI76_RS23165 +0.5 1.4 ATP:cob(I)alamin adenosyltransferase compare
BWI76_RS23055 +0.5 1.9 cobalamin biosynthesis protein CbiG compare
BWI76_RS16210 +0.5 1.0 hypothetical protein compare
BWI76_RS08765 +0.5 2.0 8-amino-7-oxononanoate synthase compare
BWI76_RS13975 +0.5 1.9 urea carboxylase compare
BWI76_RS24910 +0.5 2.7 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS02745 +0.5 1.0 hypothetical protein compare
BWI76_RS15215 +0.5 0.8 N-acetyltransferase compare
BWI76_RS15185 +0.5 1.8 N-acetyltransferase compare
BWI76_RS27820 +0.5 0.8 ilvB operon leader peptide IvbL compare
BWI76_RS06810 +0.5 2.0 hypothetical protein compare
BWI76_RS04770 +0.5 2.3 D-alanine--D-alanine ligase compare
BWI76_RS11060 +0.5 1.5 septum formation inhibitor Maf compare
BWI76_RS24275 +0.5 1.1 biopolymer transport protein ExbD compare
BWI76_RS09520 +0.5 1.7 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS12750 +0.5 1.9 hypothetical protein compare
BWI76_RS18385 +0.5 0.8 hypothetical protein compare
BWI76_RS14680 +0.5 1.4 SefF compare
BWI76_RS25705 +0.5 2.7 hypothetical protein compare
BWI76_RS18335 +0.5 3.4 DNA-binding response regulator compare
BWI76_RS20940 +0.5 0.7 uracil/xanthine transporter compare
BWI76_RS06290 +0.5 1.4 ACP phosphodiesterase compare
BWI76_RS05485 +0.5 3.6 transpeptidase compare
BWI76_RS15015 +0.5 1.0 DUF2132 domain-containing protein compare
BWI76_RS26520 +0.5 1.7 nickel import ATP-binding protein NikE compare
BWI76_RS21070 +0.5 0.8 outer membrane protein assembly factor BamB compare
BWI76_RS06695 +0.5 2.3 ABC transporter substrate-binding protein compare
BWI76_RS26130 +0.5 1.6 ADP compounds hydrolase NudE compare
BWI76_RS07920 +0.5 1.5 methionine aminotransferase compare
BWI76_RS12055 +0.5 1.9 DNA single-strand annealing protein RecT-like protein compare
BWI76_RS21580 +0.5 0.8 SsrA-binding protein compare
BWI76_RS14575 +0.5 1.9 TENA/THI-4 family protein compare
BWI76_RS04425 +0.5 1.7 oxaloacetate decarboxylase subunit gamma compare
BWI76_RS18780 +0.5 1.2 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS21505 +0.5 0.9 hypothetical protein compare
BWI76_RS17970 +0.5 0.9 zinc metalloprotease HtpX compare
BWI76_RS11455 +0.5 2.1 AraC family transcriptional regulator compare
BWI76_RS12155 +0.5 1.5 hypothetical protein compare
BWI76_RS20410 +0.5 2.5 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC compare
BWI76_RS14280 +0.5 2.1 hypothetical protein compare
BWI76_RS18845 +0.5 1.5 nitrogen fixation protein NifX compare
BWI76_RS10805 +0.5 1.6 hypothetical protein compare
BWI76_RS04515 +0.5 0.8 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS09750 +0.4 1.3 DUF421 domain-containing protein compare
BWI76_RS02785 +0.4 1.7 AIG2 family protein compare
BWI76_RS18550 +0.4 1.1 tRNA-Asn compare
BWI76_RS10955 +0.4 1.3 hypothetical protein compare
BWI76_RS15790 +0.4 1.2 replication protein compare
BWI76_RS19130 +0.4 1.2 3-methyladenine DNA glycosylase 2 compare
BWI76_RS05050 +0.4 0.8 general secretion pathway protein GspL compare
BWI76_RS16120 +0.4 1.6 4-carboxymuconolactone decarboxylase compare
BWI76_RS18935 +0.4 2.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS24305 +0.4 2.2 2,5-didehydrogluconate reductase A compare
BWI76_RS13420 +0.4 1.3 ABC transporter permease compare
BWI76_RS05335 +0.4 1.3 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS07955 +0.4 1.9 nucleoside diphosphate kinase regulator compare
BWI76_RS17980 +0.4 1.1 RNA chaperone ProQ compare
BWI76_RS16550 +0.4 2.3 tRNA-Val compare
BWI76_RS21810 +0.4 1.0 universal stress protein compare
BWI76_RS04710 +0.4 1.4 hypothetical protein compare
BWI76_RS11535 +0.4 1.3 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein compare
BWI76_RS25415 +0.4 1.7 GntR family transcriptional regulator compare
BWI76_RS02055 +0.4 1.9 murein hydrolase effector protein LrgB compare
BWI76_RS25600 +0.4 0.5 tRNA-Thr compare
BWI76_RS13240 +0.4 0.8 hypothetical protein compare
BWI76_RS09050 +0.4 1.3 MFS transporter compare
BWI76_RS12520 +0.4 1.5 hypothetical protein compare
BWI76_RS04955 +0.4 0.8 hypoxanthine phosphoribosyltransferase compare
BWI76_RS07165 +0.4 1.4 hypothetical protein compare
BWI76_RS03165 +0.4 1.9 phage polarity suppression protein compare
BWI76_RS04645 +0.4 1.8 3-dehydroquinase compare
BWI76_RS24020 +0.4 1.7 peptidase M48 compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms