Experiment set32IT013 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS02995 -7.0 -7.3 aspartate carbamoyltransferase compare
BWI76_RS09645 -6.9 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS20970 -6.4 -1.8 phosphoribosylglycinamide formyltransferase compare
BWI76_RS20895 -6.2 -5.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04465 -5.9 -4.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -5.7 -8.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS02530 -5.4 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS10990 -5.3 -5.1 dihydroorotase compare
BWI76_RS27385 -5.2 -7.9 orotate phosphoribosyltransferase compare
BWI76_RS19010 -5.2 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS23265 -5.1 -5.2 hypothetical protein compare
BWI76_RS15110 -4.8 -16.8 putative excinuclease ABC subunit A compare
BWI76_RS09910 -4.1 -14.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS15115 -3.7 -6.7 MFS transporter compare
BWI76_RS04510 -3.7 -2.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19035 -3.7 -9.2 dTDP-rhamnosyl transferase compare
BWI76_RS01210 -3.6 -2.0 tyrosine recombinase XerC compare
BWI76_RS00600 -3.6 -9.9 LacI family transcriptional regulator compare
BWI76_RS06525 -3.6 -5.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS19040 -3.6 -5.2 hypothetical protein compare
BWI76_RS23240 -3.6 -2.4 exonuclease V subunit gamma compare
BWI76_RS09660 -3.5 -2.2 DNA translocase FtsK compare
BWI76_RS01615 -3.5 -7.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS13915 -3.4 -6.4 magnesium transport protein MgtC compare
BWI76_RS20355 -3.3 -2.9 colicin V production protein compare
BWI76_RS15225 -3.0 -3.5 DeoR family transcriptional regulator compare
BWI76_RS07065 -2.9 -4.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS27430 -2.9 -1.1 (p)ppGpp synthetase compare
BWI76_RS19050 -2.9 -10.7 NAD(P)-dependent oxidoreductase compare
BWI76_RS15840 -2.8 -3.2 prophage protein compare
BWI76_RS01325 -2.8 -2.1 twin-arginine translocase subunit TatB compare
BWI76_RS01200 -2.8 -2.3 diaminopimelate epimerase compare
BWI76_RS15850 -2.7 -1.0 DUF1317 domain-containing protein compare
BWI76_RS00180 -2.7 -1.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS11965 -2.7 -2.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS05200 -2.7 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS23230 -2.6 -1.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS12170 -2.5 -4.5 hypothetical protein compare
BWI76_RS19055 -2.5 -8.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS04530 -2.5 -1.5 peptidylprolyl isomerase SurA compare
BWI76_RS19060 -2.5 -14.1 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS01610 -2.4 -7.1 phosphoribosylamine--glycine ligase compare
BWI76_RS20350 -2.4 -3.3 amidophosphoribosyltransferase compare
BWI76_RS21265 -2.2 -8.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS25060 -2.2 -3.7 lipoprotein NlpI compare
BWI76_RS07070 -2.1 -3.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS19840 -2.1 -1.5 hypothetical protein compare
BWI76_RS21660 -2.1 -1.9 antirestriction protein compare
BWI76_RS27390 -2.1 -3.5 ribonuclease PH compare
BWI76_RS22755 -2.0 -5.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23320 -2.0 -1.6 hypothetical protein compare
BWI76_RS05450 -2.0 -1.4 ribonuclease HI compare
BWI76_RS12145 -1.9 -2.6 hypothetical protein compare
BWI76_RS05120 -1.9 -7.9 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09755 -1.9 -4.3 phosphoserine transaminase compare
BWI76_RS26085 -1.9 -1.3 3-dehydroquinate synthase compare
BWI76_RS26620 -1.9 -1.1 Fe-S biogenesis protein NfuA compare
BWI76_RS06530 -1.9 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS21690 -1.8 -2.2 hypothetical protein compare
BWI76_RS02410 -1.8 -1.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS13920 -1.8 -3.7 magnesium-translocating P-type ATPase compare
BWI76_RS27310 -1.8 -5.3 glycosyltransferase compare
BWI76_RS01350 -1.7 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS15825 -1.7 -2.5 hypothetical protein compare
BWI76_RS15860 -1.7 -2.0 adenine-specific DNA methyltransferase compare
BWI76_RS20965 -1.6 -1.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS24945 -1.6 -1.1 glutamine amidotransferase compare
BWI76_RS01995 -1.6 -1.4 AraC family transcriptional regulator compare
BWI76_RS01385 -1.5 -1.7 potassium transporter compare
BWI76_RS06910 -1.5 -1.4 transcriptional regulator compare
BWI76_RS15835 -1.5 -1.1 hypothetical protein compare
BWI76_RS00400 -1.5 -0.7 glutamine synthetase compare
BWI76_RS25600 -1.5 -0.8 tRNA-Thr compare
BWI76_RS21375 -1.5 -1.5 autonomous glycyl radical cofactor GrcA compare
BWI76_RS21140 -1.5 -1.6 molecular chaperone HscA compare
BWI76_RS16075 -1.4 -1.3 oxidoreductase compare
BWI76_RS08520 -1.4 -1.5 colicin transporter TolQ compare
BWI76_RS15830 -1.4 -1.8 hypothetical protein compare
BWI76_RS26775 -1.4 -4.4 endo-1,4-D-glucanase compare
BWI76_RS14005 -1.4 -1.7 TetR family transcriptional regulator compare
BWI76_RS01205 -1.4 -2.6 DUF484 family protein compare
BWI76_RS09190 -1.4 -2.0 hypothetical protein compare
BWI76_RS21580 -1.4 -0.8 SsrA-binding protein compare
BWI76_RS19845 -1.4 -5.2 phosphatase compare
BWI76_RS14390 -1.3 -1.3 hypothetical protein compare
BWI76_RS19070 -1.3 -7.7 rhamnosyltransferase compare
BWI76_RS04160 -1.3 -3.4 phosphoserine phosphatase compare
BWI76_RS25920 -1.3 -1.3 peptidylprolyl isomerase compare
BWI76_RS12070 -1.2 -1.1 hypothetical protein compare
BWI76_RS26065 -1.2 -1.4 phosphoglycolate phosphatase compare
BWI76_RS12255 -1.2 -7.7 hypothetical protein compare
BWI76_RS13560 -1.2 -0.9 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS12160 -1.2 -5.3 hypothetical protein compare
BWI76_RS13820 -1.2 -1.1 hypothetical protein compare
BWI76_RS09560 -1.2 -1.5 DoxX family membrane protein compare
BWI76_RS25115 -1.2 -4.4 argininosuccinate synthase compare
BWI76_RS10755 -1.1 -1.1 pyrimidine utilization flavin reductase protein F compare
BWI76_RS21370 -1.1 -1.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS15715 -1.1 -2.0 putative ninG protein compare
BWI76_RS21450 -1.1 -0.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS13595 -1.1 -2.0 transcriptional regulator compare
BWI76_RS17045 -1.1 -1.2 hypothetical protein compare
BWI76_RS23920 -1.1 -3.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS12305 -1.0 -2.4 hypothetical protein compare
BWI76_RS12265 -1.0 -3.5 hypothetical protein compare
BWI76_RS23515 -1.0 -1.1 antibiotic biosynthesis monooxygenase compare
BWI76_RS12295 -1.0 -2.0 hypothetical protein compare
BWI76_RS21325 -1.0 -1.2 hypothetical protein compare
BWI76_RS19870 -1.0 -1.5 malate:quinone oxidoreductase compare
BWI76_RS10060 -1.0 -1.0 acylphosphatase compare
BWI76_RS20050 -1.0 -1.1 hypothetical protein compare
BWI76_RS12190 -1.0 -3.3 glycoside hydrolase family protein compare
BWI76_RS15620 -1.0 -1.5 hypothetical protein compare
BWI76_RS01220 -1.0 -3.9 DNA-dependent helicase II compare
BWI76_RS16150 -1.0 -1.7 IclR family transcriptional regulator compare
BWI76_RS05075 -1.0 -0.8 type II secretion system protein GspG compare
BWI76_RS18000 -1.0 -2.0 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS01650 -1.0 -1.5 acetyltransferase compare
BWI76_RS19045 -1.0 -3.9 capsular polysaccharide biosynthesis protein compare
BWI76_RS12300 -1.0 -4.1 hypothetical protein compare
BWI76_RS02735 -1.0 -2.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS26200 -0.9 -2.5 starch synthase compare
BWI76_RS01290 -0.9 -2.3 putative dienelactone hydrolase compare
BWI76_RS12195 -0.9 -2.5 hypothetical protein compare
BWI76_RS14415 -0.9 -1.5 transcriptional regulator, TetR family protein compare
BWI76_RS19860 -0.9 -1.7 hypothetical protein compare
BWI76_RS12985 -0.9 -1.1 transcriptional regulator compare
BWI76_RS06535 -0.9 -2.2 endopeptidase La compare
BWI76_RS12275 -0.9 -3.9 hypothetical protein compare
BWI76_RS00845 -0.9 -4.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11835 -0.9 -1.0 putative regulatory protein MarR compare
BWI76_RS25285 -0.9 -0.7 HPr family phosphocarrier protein compare
BWI76_RS05465 -0.9 -1.0 amidohydrolase compare
BWI76_RS21675 -0.9 -0.5 hypothetical protein compare
BWI76_RS12245 -0.9 -5.8 hypothetical protein compare
BWI76_RS09655 -0.9 -2.3 leucine-responsive regulatory protein compare
BWI76_RS07095 -0.9 -2.2 ribosome-associated protein compare
BWI76_RS13645 -0.9 -1.9 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS09500 -0.9 -1.0 arginine ABC transporter substrate-binding protein compare
BWI76_RS24765 -0.9 -1.9 membrane protein compare
BWI76_RS15705 -0.9 -2.0 putative holin protein compare
BWI76_RS21350 -0.9 -2.2 anti-RNA polymerase sigma factor SigE compare
BWI76_RS12250 -0.9 -4.4 terminase compare
BWI76_RS08375 -0.9 -1.1 pyroglutamyl-peptidase I compare
BWI76_RS00875 -0.9 -2.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS26410 -0.9 -1.0 membrane protein compare
BWI76_RS26570 -0.9 -1.4 anion permease compare
BWI76_RS26425 -0.8 -2.9 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS16090 -0.8 -1.5 two-component system response regulator DcuR compare
BWI76_RS00025 -0.8 -0.7 hypothetical protein compare
BWI76_RS12220 -0.8 -4.3 hypothetical protein compare
BWI76_RS23480 -0.8 -3.4 EAL domain-containing protein compare
BWI76_RS03295 -0.8 -1.0 transposase compare
BWI76_RS18870 -0.8 -0.9 protein NifZ compare
BWI76_RS12240 -0.8 -3.9 terminase small subunit compare
BWI76_RS03005 -0.8 -3.0 hypothetical protein compare
BWI76_RS22520 -0.8 -2.2 3-oxoacyl-ACP synthase compare
BWI76_RS08120 -0.8 -2.4 cobalt transporter compare
BWI76_RS25700 -0.8 -3.5 heavy metal-responsive transcriptional regulator compare
BWI76_RS22840 -0.8 -1.1 transposase compare
BWI76_RS15295 -0.8 -1.7 MDR efflux pump AcrAB transcriptional activator MarA compare
BWI76_RS22695 -0.8 -2.6 sulfate adenylyltransferase compare
BWI76_RS20360 -0.8 -0.7 cell division protein DedD compare
BWI76_RS22765 -0.8 -3.5 sulfite reductase subunit alpha compare
BWI76_RS17770 -0.8 -1.0 isomerase/hydrolase compare
BWI76_RS18165 -0.8 -0.9 NUDIX pyrophosphatase compare
BWI76_RS00795 -0.8 -1.6 carboxymuconolactone decarboxylase compare
BWI76_RS18200 -0.8 -2.6 copper homeostasis protein CutC compare
BWI76_RS01110 -0.8 -1.5 TDP-fucosamine acetyltransferase compare
BWI76_RS00345 -0.8 -1.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS27915 -0.8 -1.3 YceK/YidQ family lipoprotein compare
BWI76_RS27850 -0.8 -1.7 DNA-binding transcriptional regulator DsdC compare
BWI76_RS08530 -0.8 -0.7 protein TolA compare
BWI76_RS07450 -0.8 -1.4 transcriptional regulator compare
BWI76_RS14015 -0.8 -1.4 L-2,4-diaminobutyrate decarboxylase compare
BWI76_RS03080 -0.8 -1.4 (Fe-S)-cluster assembly protein compare
BWI76_RS15990 -0.8 -1.4 serine protease compare
BWI76_RS26000 -0.8 -2.3 aspartate aminotransferase family protein compare
BWI76_RS18360 -0.8 -0.9 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS14410 -0.8 -1.6 hypothetical protein compare
BWI76_RS08275 -0.7 -1.1 LexA regulated protein compare
BWI76_RS03010 -0.7 -2.4 ornithine carbamoyltransferase compare
BWI76_RS27510 -0.7 -2.9 aquaporin compare
BWI76_RS09310 -0.7 -2.1 hypothetical protein compare
BWI76_RS25870 -0.7 -0.8 elongation factor Tu compare
BWI76_RS11235 -0.7 -0.7 hypothetical protein compare
BWI76_RS24115 -0.7 -1.7 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS23805 -0.7 -4.3 ssDNA exonuclease RecJ compare
BWI76_RS05180 -0.7 -2.9 serine endoprotease DegQ compare
BWI76_RS06250 -0.7 -1.6 alpha-glycosidase compare
BWI76_RS11170 -0.7 -0.9 hypothetical protein compare
BWI76_RS15600 -0.7 -1.4 hypothetical protein compare
BWI76_RS03515 -0.7 -1.7 hypothetical protein compare
BWI76_RS06830 -0.7 -2.7 recombination protein RecR compare
BWI76_RS12085 -0.7 -1.5 regulatory protein CII from bacteriophage origin compare
BWI76_RS11255 -0.7 -1.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS26590 -0.7 -1.9 transcriptional regulator compare
BWI76_RS13170 -0.7 -1.0 methyltransferase compare
BWI76_RS23330 -0.7 -1.9 transcriptional regulator GalR compare
BWI76_RS26670 -0.7 -4.1 two-component sensor histidine kinase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms