Experiment set32IT011 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS10990 -8.5 -4.6 dihydroorotase compare
BWI76_RS02995 -7.7 -10.3 aspartate carbamoyltransferase compare
BWI76_RS04470 -7.7 -10.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS04465 -7.2 -9.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS09645 -6.9 -2.6 thioredoxin-disulfide reductase compare
BWI76_RS23265 -5.3 -5.0 hypothetical protein compare
BWI76_RS15110 -5.3 -19.0 putative excinuclease ABC subunit A compare
BWI76_RS19010 -5.3 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS09910 -4.7 -18.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS27385 -4.3 -8.5 orotate phosphoribosyltransferase compare
BWI76_RS01210 -4.3 -3.8 tyrosine recombinase XerC compare
BWI76_RS19040 -4.1 -8.2 hypothetical protein compare
BWI76_RS15115 -4.1 -6.3 MFS transporter compare
BWI76_RS11965 -4.0 -7.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS15825 -3.7 -6.3 hypothetical protein compare
BWI76_RS19035 -3.6 -9.3 dTDP-rhamnosyl transferase compare
BWI76_RS23240 -3.6 -2.5 exonuclease V subunit gamma compare
BWI76_RS09660 -3.6 -2.5 DNA translocase FtsK compare
BWI76_RS04510 -3.5 -2.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00600 -3.5 -8.5 LacI family transcriptional regulator compare
BWI76_RS20965 -3.5 -5.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS15225 -3.4 -2.5 DeoR family transcriptional regulator compare
BWI76_RS07070 -3.4 -6.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS06525 -3.4 -8.2 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS13915 -3.1 -8.4 magnesium transport protein MgtC compare
BWI76_RS26075 -3.0 -4.8 DNA adenine methylase compare
BWI76_RS05120 -2.9 -10.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS15840 -2.9 -3.1 prophage protein compare
BWI76_RS19060 -2.8 -16.8 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS27390 -2.8 -4.6 ribonuclease PH compare
BWI76_RS05200 -2.6 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS20970 -2.6 -2.4 phosphoribosylglycinamide formyltransferase compare
BWI76_RS23230 -2.6 -1.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS02530 -2.6 -2.5 tRNA dimethylallyltransferase compare
BWI76_RS19055 -2.6 -10.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS20350 -2.5 -8.8 amidophosphoribosyltransferase compare
BWI76_RS20355 -2.5 -2.1 colicin V production protein compare
BWI76_RS06530 -2.5 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08520 -2.4 -1.4 colicin transporter TolQ compare
BWI76_RS00345 -2.4 -4.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS20895 -2.4 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS13920 -2.4 -5.0 magnesium-translocating P-type ATPase compare
BWI76_RS19050 -2.3 -10.0 NAD(P)-dependent oxidoreductase compare
BWI76_RS21265 -2.3 -10.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09190 -2.1 -3.7 hypothetical protein compare
BWI76_RS15835 -2.1 -1.3 hypothetical protein compare
BWI76_RS07065 -2.0 -5.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01610 -2.0 -6.1 phosphoribosylamine--glycine ligase compare
BWI76_RS01615 -2.0 -6.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS12170 -2.0 -5.6 hypothetical protein compare
BWI76_RS20650 -1.9 -2.4 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS08535 -1.8 -2.0 translocation protein TolB compare
BWI76_RS12090 -1.8 -1.3 HNH endonuclease compare
BWI76_RS26775 -1.8 -3.6 endo-1,4-D-glucanase compare
BWI76_RS15860 -1.8 -2.0 adenine-specific DNA methyltransferase compare
BWI76_RS15850 -1.7 -0.6 DUF1317 domain-containing protein compare
BWI76_RS20380 -1.7 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS01200 -1.7 -1.9 diaminopimelate epimerase compare
BWI76_RS27310 -1.7 -7.5 glycosyltransferase compare
BWI76_RS07185 -1.7 -2.2 hypothetical protein compare
BWI76_RS25060 -1.7 -3.7 lipoprotein NlpI compare
BWI76_RS26570 -1.6 -2.1 anion permease compare
BWI76_RS19845 -1.6 -5.6 phosphatase compare
BWI76_RS00400 -1.5 -0.9 glutamine synthetase compare
BWI76_RS01870 -1.5 -3.9 diacylglycerol kinase compare
BWI76_RS04715 -1.5 -1.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS22755 -1.5 -6.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS21075 -1.5 -1.7 membrane protein compare
BWI76_RS09655 -1.4 -5.8 leucine-responsive regulatory protein compare
BWI76_RS01205 -1.4 -3.4 DUF484 family protein compare
BWI76_RS12255 -1.4 -8.9 hypothetical protein compare
BWI76_RS01350 -1.4 -1.1 NAD(P)H-flavin reductase compare
BWI76_RS01220 -1.4 -4.7 DNA-dependent helicase II compare
BWI76_RS26670 -1.4 -7.5 two-component sensor histidine kinase compare
BWI76_RS02735 -1.3 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS16965 -1.3 -2.0 murein lipoprotein compare
BWI76_RS21370 -1.3 -1.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS26200 -1.3 -5.2 starch synthase compare
BWI76_RS23920 -1.3 -2.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS19070 -1.3 -9.0 rhamnosyltransferase compare
BWI76_RS23480 -1.3 -6.5 EAL domain-containing protein compare
BWI76_RS04160 -1.3 -3.9 phosphoserine phosphatase compare
BWI76_RS12265 -1.3 -7.1 hypothetical protein compare
BWI76_RS12270 -1.2 -5.0 hypothetical protein compare
BWI76_RS03010 -1.2 -5.8 ornithine carbamoyltransferase compare
BWI76_RS21450 -1.2 -2.1 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS06535 -1.1 -3.2 endopeptidase La compare
BWI76_RS01110 -1.1 -1.8 TDP-fucosamine acetyltransferase compare
BWI76_RS15660 -1.1 -1.2 hypothetical protein compare
BWI76_RS02725 -1.1 -1.3 HxlR family transcriptional regulator compare
BWI76_RS19045 -1.1 -5.9 capsular polysaccharide biosynthesis protein compare
BWI76_RS01135 -1.1 -3.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS24025 -1.1 -4.1 agmatinase compare
BWI76_RS01330 -1.1 -3.3 twin-arginine translocase subunit TatC compare
BWI76_RS25425 -1.1 -1.6 arginine repressor compare
BWI76_RS12465 -1.1 -1.1 phage shock protein D compare
BWI76_RS01885 -1.1 -1.2 CsbD family protein compare
BWI76_RS26440 -1.1 -1.3 hypothetical protein compare
BWI76_RS13595 -1.1 -2.5 transcriptional regulator compare
BWI76_RS21505 -1.1 -1.3 hypothetical protein compare
BWI76_RS17980 -1.1 -3.1 RNA chaperone ProQ compare
BWI76_RS17975 -1.1 -3.7 tail-specific protease compare
BWI76_RS12240 -1.1 -4.6 terminase small subunit compare
BWI76_RS01325 -1.0 -1.7 twin-arginine translocase subunit TatB compare
BWI76_RS02410 -1.0 -0.9 EF-P beta-lysylation protein EpmB compare
BWI76_RS16815 -1.0 -1.9 periplasmic binding protein compare
BWI76_RS15830 -1.0 -1.3 hypothetical protein compare
BWI76_RS10930 -1.0 -5.3 glucan biosynthesis protein G compare
BWI76_RS15680 -1.0 -2.8 hypothetical protein compare
BWI76_RS09615 -1.0 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS12275 -1.0 -5.3 hypothetical protein compare
BWI76_RS12245 -1.0 -6.1 hypothetical protein compare
BWI76_RS26390 -1.0 -3.8 cell division protein FtsX compare
BWI76_RS08530 -1.0 -2.1 protein TolA compare
BWI76_RS23220 -1.0 -5.2 amino-acid N-acetyltransferase compare
BWI76_RS16275 -1.0 -1.7 fumarate hydratase FumA compare
BWI76_RS26620 -1.0 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS04530 -0.9 -1.0 peptidylprolyl isomerase SurA compare
BWI76_RS08525 -0.9 -1.6 colicin transporter compare
BWI76_RS09755 -0.9 -3.3 phosphoserine transaminase compare
BWI76_RS11110 -0.9 -2.3 cell division protein YceG compare
BWI76_RS21000 -0.9 -4.2 exopolyphosphatase compare
BWI76_RS20430 -0.9 -2.7 penicillin-insensitive murein endopeptidase compare
BWI76_RS19700 -0.9 -2.0 deoxyribonuclease IV compare
BWI76_RS00720 -0.9 -1.7 DNA-binding response regulator compare
BWI76_RS05260 -0.9 -1.5 chaperone compare
BWI76_RS26665 -0.9 -2.0 DNA-binding response regulator compare
BWI76_RS26395 -0.9 -2.2 cell division protein FtsE compare
BWI76_RS12250 -0.9 -5.3 terminase compare
BWI76_RS18200 -0.9 -4.2 copper homeostasis protein CutC compare
BWI76_RS01800 -0.9 -3.4 glucose-6-phosphate isomerase compare
BWI76_RS22760 -0.9 -4.0 sulfite reductase subunit beta compare
BWI76_RS27440 -0.9 -2.1 DNA helicase RecG compare
BWI76_RS00855 -0.9 -3.5 argininosuccinate lyase compare
BWI76_RS19460 -0.9 -2.6 lipoprotein compare
BWI76_RS06465 -0.9 -1.4 IclR family transcriptional regulator compare
BWI76_RS14825 -0.9 -1.3 dienelactone hydrolase family protein compare
BWI76_RS22690 -0.9 -2.7 adenylyl-sulfate kinase compare
BWI76_RS00875 -0.9 -4.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS18165 -0.9 -1.4 NUDIX pyrophosphatase compare
BWI76_RS27950 -0.9 -2.5 transcriptional regulator compare
BWI76_RS19905 -0.9 -4.2 OmpK36 porin compare
BWI76_RS22765 -0.9 -3.8 sulfite reductase subunit alpha compare
BWI76_RS09560 -0.9 -1.7 DoxX family membrane protein compare
BWI76_RS06735 -0.8 -1.6 50S ribosomal protein L31 compare
BWI76_RS20995 -0.8 -2.5 RNA degradosome polyphosphate kinase compare
BWI76_RS06400 -0.8 -2.1 oxidative-stress-resistance chaperone compare
BWI76_RS06295 -0.8 -3.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS12790 -0.8 -1.1 lactate dehydrogenase compare
BWI76_RS12070 -0.8 -1.1 hypothetical protein compare
BWI76_RS25115 -0.8 -4.1 argininosuccinate synthase compare
BWI76_RS10935 -0.8 -3.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS23875 -0.8 -4.7 glycine cleavage system protein H compare
BWI76_RS12160 -0.8 -2.9 hypothetical protein compare
BWI76_RS22625 -0.8 -1.5 transcriptional regulator compare
BWI76_RS03180 -0.8 -0.8 phage transcriptional regulator, AlpA compare
BWI76_RS19775 -0.8 -1.6 phage resistance protein compare
BWI76_RS20375 -0.8 -1.7 membrane protein compare
BWI76_RS24575 -0.8 -1.1 hypothetical protein compare
BWI76_RS08275 -0.8 -1.5 LexA regulated protein compare
BWI76_RS19870 -0.8 -1.6 malate:quinone oxidoreductase compare
BWI76_RS20390 -0.8 -1.4 erythronate-4-phosphate dehydrogenase compare
BWI76_RS27235 -0.8 -5.3 murein hydrolase activator EnvC compare
BWI76_RS25600 -0.8 -0.7 tRNA-Thr compare
BWI76_RS16360 -0.8 -1.3 electron transport complex subunit RsxB compare
BWI76_RS15760 -0.8 -1.2 hypothetical protein compare
BWI76_RS12125 -0.8 -2.3 hypothetical protein compare
BWI76_RS07510 -0.8 -1.7 hypothetical protein compare
BWI76_RS07845 -0.8 -1.5 LacI family transcriptional regulator compare
BWI76_RS21070 -0.8 -0.9 outer membrane protein assembly factor BamB compare
BWI76_RS01540 -0.8 -1.5 thiamine biosynthesis protein ThiS compare
BWI76_RS25700 -0.8 -4.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS12190 -0.8 -2.7 glycoside hydrolase family protein compare
BWI76_RS25300 -0.8 -1.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS25065 -0.8 -1.1 polyribonucleotide nucleotidyltransferase compare
BWI76_RS12340 -0.8 -2.6 molecular chaperone Tir compare
BWI76_RS12335 -0.8 -3.5 hypothetical protein compare
BWI76_RS08120 -0.8 -2.1 cobalt transporter compare
BWI76_RS17720 -0.8 -0.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS12410 -0.8 -4.4 hypothetical protein compare
BWI76_RS26425 -0.7 -4.0 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS15975 -0.7 -0.9 hypothetical protein compare
BWI76_RS09650 -0.7 -2.8 hypothetical protein compare
BWI76_RS05790 -0.7 -1.2 phage DNA-binding protein compare
BWI76_RS06680 -0.7 -0.9 hypothetical protein compare
BWI76_RS14665 -0.7 -2.2 minor fimbrial subunit YfcQ compare
BWI76_RS25240 -0.7 -2.6 D-arabinose 5-phosphate isomerase compare
BWI76_RS27820 -0.7 -0.8 ilvB operon leader peptide IvbL compare
BWI76_RS19615 -0.7 -2.3 vancomycin high temperature exclusion protein compare
BWI76_RS00845 -0.7 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04525 -0.7 -1.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS00850 -0.7 -4.0 acetylglutamate kinase compare
BWI76_RS12045 -0.7 -1.7 hypothetical protein compare
BWI76_RS02765 -0.7 -2.8 membrane protein compare
BWI76_RS23065 -0.7 -2.7 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS00025 -0.7 -0.8 hypothetical protein compare
BWI76_RS12305 -0.7 -2.4 hypothetical protein compare
BWI76_RS00390 -0.7 -2.4 two-component system sensor histidine kinase NtrB compare
BWI76_RS22125 -0.7 -0.8 membrane protein compare
BWI76_RS16300 -0.7 -2.3 bifunctional beta-cystathionase/maltose regulon regulatory protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms