Experiment set31S78 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

N-Acetyl-D-Glucosamine 2.5 mg/ml carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT0316 +3.8 25.8 putative hemin receptor (NCBI ptt file) compare
BT0315 +2.8 8.1 hypothetical protein (NCBI ptt file) compare
BT0240 +2.5 10.3 conserved hypothetical protein (NCBI ptt file) compare
BT0241 +2.4 4.5 hypothetical protein (NCBI ptt file) compare
BT0242 +2.2 5.6 putative polysaccharide deacetylase (NCBI ptt file) compare
BT1369 +2.0 3.2 hypothetical protein (NCBI ptt file) compare
BT4041 +1.9 9.8 conserved hypothetical protein (NCBI ptt file) compare
BT3832 +1.8 6.2 conserved hypothetical protein (NCBI ptt file) compare
BT4002 +1.8 2.7 ATPase, ParA family (NCBI ptt file) compare
BT0967 +1.7 1.9 hypothetical protein (NCBI ptt file) compare
BT4612 +1.7 8.9 conserved hypothetical protein (NCBI ptt file) compare
BT4649 +1.7 1.9 hypothetical protein (NCBI ptt file) compare
BT4753 +1.6 2.4 hypothetical protein (NCBI ptt file) compare
BT2283 +1.6 2.5 hypothetical protein (NCBI ptt file) compare
BT2706 +1.5 8.6 methionine aminopeptidase (NCBI ptt file) compare
BT0875 +1.5 6.4 beta-ureidopropionase (NCBI ptt file) compare
BT1947 +1.4 1.9 hypothetical protein (NCBI ptt file) compare
BT0160 +1.4 5.8 hypothetical protein (NCBI ptt file) compare
BT2006 +1.4 2.2 hypothetical protein (NCBI ptt file) compare
BT4610 +1.3 2.3 RecA (NCBI ptt file) compare
BT0067 +1.3 2.0 hypothetical protein (NCBI ptt file) compare
BT1127 +1.3 1.5 mobilization protein BmgB (NCBI ptt file) compare
BT1197 +1.2 3.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1704 +1.2 1.6 hypothetical protein (NCBI ptt file) compare
BT0869 +1.2 1.7 hypothetical protein (NCBI ptt file) compare
BT4025 +1.1 1.8 hypothetical protein (NCBI ptt file) compare
BT1920 +1.0 4.8 hypothetical protein (NCBI ptt file) compare
BT2417 +1.0 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1088 +1.0 2.2 hypothetical protein (NCBI ptt file) compare
BT1558 +1.0 3.2 hypothetical protein (NCBI ptt file) compare
BT2537 +1.0 2.8 hypothetical protein (NCBI ptt file) compare
BT0327 +0.9 1.4 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT0848 +0.9 2.0 hypothetical protein (NCBI ptt file) compare
BT0418 +0.9 2.0 outer membrane porin F precursor (NCBI ptt file) compare
BT2072 +0.9 6.3 aconitate hydratase (NCBI ptt file) compare
BT0018 +0.9 2.7 hypothetical protein (NCBI ptt file) compare
BT3737 +0.9 1.3 hypothetical protein (NCBI ptt file) compare
BT0923 +0.9 1.1 putative periplasmic protein (NCBI ptt file) compare
BT1466 +0.9 1.8 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0972 +0.9 1.3 putative oxidoreductase (NCBI ptt file) compare
BT0877 +0.9 1.3 ferredoxin domain containing protein (NCBI ptt file) compare
BT1424 +0.9 3.5 hypothetical protein (NCBI ptt file) compare
BT3022 +0.9 1.3 hypothetical protein (NCBI ptt file) compare
BT0776 +0.9 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT3852 +0.9 3.9 major outer membrane protein OmpA (NCBI ptt file) compare
BT4429 +0.9 3.5 putative pteridine-dependent dioxygenase (NCBI ptt file) compare
BT0063 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT1451 +0.8 1.8 hypothetical protein (NCBI ptt file) compare
BT3974 +0.8 4.5 conserved hypothetical protein (NCBI ptt file) compare
BT0780 +0.8 1.9 acetyltransferase (NCBI ptt file) compare
BT3502 +0.8 2.9 hypothetical protein (NCBI ptt file) compare
BT2471 +0.8 2.3 hypothetical protein (NCBI ptt file) compare
BT0313 +0.8 1.3 flavodoxin (NCBI ptt file) compare
BT2027 +0.8 1.4 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0378 +0.8 1.2 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT0635 +0.8 1.6 putative transcriptional regulator (NCBI ptt file) compare
BT4086 +0.8 2.4 hypothetical protein (NCBI ptt file) compare
BT3694 +0.8 1.5 glycosyltransferase (NCBI ptt file) compare
BT2284 +0.8 1.7 hypothetical protein (NCBI ptt file) compare
BT2236 +0.8 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0462 +0.8 1.9 putative transcriptional regulator (NCBI ptt file) compare
BT4349 +0.8 2.2 hypothetical protein (NCBI ptt file) compare
BT2972 +0.8 3.3 conserved hypothetical protein (NCBI ptt file) compare
BT1215 +0.8 2.8 ABC transporter, permease protein (NCBI ptt file) compare
BT4206 +0.8 1.1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT3856 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT3363 +0.8 1.3 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT0134 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0238 +0.7 2.5 transcriptional regulator (NCBI ptt file) compare
BT1561 +0.7 0.6 hypothetical protein (NCBI ptt file) compare
BT1093 +0.7 2.1 conserved hypothetical protein, putative TonB-dependent outer membrane receptor protein (NCBI ptt file) compare
BT4730 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT1263 +0.7 1.0 putative protease I (NCBI ptt file) compare
BT0693 +0.7 2.3 hypothetical protein (NCBI ptt file) compare
BT4400 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT4248 +0.7 2.7 putative anti-sigma factor (NCBI ptt file) compare
BT2781 +0.7 2.5 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT2093 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0492 +0.7 2.6 integral membrane protein (NCBI ptt file) compare
BT1255 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT3457 +0.7 2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3491 +0.7 2.1 glutaminase A (NCBI ptt file) compare
BT4414 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT3682 +0.7 3.1 hypothetical protein (NCBI ptt file) compare
BT1504 +0.7 3.0 hypothetical protein (NCBI ptt file) compare
BT0322 +0.7 1.8 putative oxidoreductase (NCBI ptt file) compare
BT1227 +0.7 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT3642 +0.7 2.2 Na+-dependent transporter (NCBI ptt file) compare
BT1817 +0.6 1.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0370 +0.6 2.6 galactokinase (NCBI ptt file) compare
BT0501 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT0844 +0.6 0.6 hypothetical protein (NCBI ptt file) compare
BT2116 +0.6 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3738 +0.6 5.6 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT0361 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT4641 +0.6 2.0 putative acetyltransferase (NCBI ptt file) compare
BT1788 +0.6 3.2 hypothetical protein (NCBI ptt file) compare
BT0901 +0.6 1.9 putative universal stress protein UspA (NCBI ptt file) compare
BT2684 +0.6 1.0 hypothetical protein (NCBI ptt file) compare
BT0702 +0.6 1.3 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT0273 +0.6 2.4 Outer membrane binding protein for (+)-arabinogalactan (SusD-like) (from data) compare
BT2043 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT1390 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1951 +0.6 1.0 Fe3+ ABC transporter, permease protein (NCBI ptt file) compare
BT2298 +0.6 3.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1808 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0270 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT1194 +0.6 2.1 outer membrane protein, OmpA family (NCBI ptt file) compare
BT3972 +0.6 2.7 putative NTP pyrophosphohydrolase (NCBI ptt file) compare
BT1021 +0.6 1.7 arabinosidase (NCBI ptt file) compare
BT1235 +0.6 2.2 AraC-type transcription regulator (NCBI ptt file) compare
BT2677 +0.6 2.8 hypothetical protein (NCBI ptt file) compare
BT3887 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT2247 +0.6 1.5 putative ryanodine receptor (NCBI ptt file) compare
BT1868 +0.6 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1485 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT4383 +0.6 1.7 putative sugar kinase (NCBI ptt file) compare
BT0546 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0697 +0.6 0.9 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT1116 +0.6 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1461 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT1274 +0.6 2.0 L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase (from data) compare
BT0106 +0.6 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0443 +0.5 0.7 thermostable beta-glucosidase B (NCBI ptt file) compare
BT3438 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT3211 +0.5 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT0937 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
p5482_06 +0.5 3.5 mobilization protein A (NCBI) compare
BT4422 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4457 +0.5 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0896 +0.5 0.9 putative patatin-like phospholipase (NCBI ptt file) compare
BT1260 +0.5 2.0 putative peptidase (NCBI ptt file) compare
BT4483 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0050 +0.5 2.5 putative glycosyltransferase (NCBI ptt file) compare
BT0581 +0.5 1.0 putative acetyltransferase, GNAT family (NCBI ptt file) compare
BT0884 +0.5 1.9 outer membrane efflux protein oprM precursor (NCBI ptt file) compare
BT0988 +0.5 2.7 Mg2+ transport ATPase protein B (NCBI ptt file) compare
BT0220 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT0682 +0.5 2.6 two-component system response regulator (NCBI ptt file) compare
BT4317 +0.5 1.3 putative lipoprotein protein (NCBI ptt file) compare
BT0225 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT1962 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT2295 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT4161 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT1463 +0.5 1.8 putative acetyltransferase (NCBI ptt file) compare
BT1470 +0.5 0.9 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT1084 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT1439 +0.5 4.1 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT1334 +0.5 1.9 PhoH-like protein (NCBI ptt file) compare
BT4026 +0.5 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2539 +0.5 1.3 rubredoxin (NCBI ptt file) compare
BT_0687 +0.5 1.8 hydroxylamine reductase (RefSeq) compare
BT1169 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT4442 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT2262 +0.5 2.8 hypothetical protein (NCBI ptt file) compare
BT4527 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT2010 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT1009 +0.5 1.1 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT0838 +0.5 1.3 putative RNA methyltransferase (NCBI ptt file) compare
BT3720 +0.5 2.4 putative aspartate aminotransferase (NCBI ptt file) compare
BT1524 +0.5 0.7 hypothetical protein (NCBI ptt file) compare
BT1616 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0402 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT1219 +0.5 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1214 +0.5 1.3 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1827 +0.5 2.4 transposase (NCBI ptt file) compare
BT2198 +0.5 2.9 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2554 +0.5 2.3 hypothetical protein (NCBI ptt file) compare
BT1501 +0.5 1.0 major outer membrane protein OmpA (NCBI ptt file) compare
BT4637 +0.5 1.7 putative inorganic phosphate transporter (NCBI ptt file) compare
BT4697 +0.5 3.6 transcriptional regulator (NCBI ptt file) compare
BT1767 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT1699 +0.5 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1376 +0.5 1.1 putative ATP-binding protein involved in cell division (NCBI ptt file) compare
BT1519 +0.5 1.6 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT4511 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT4776 +0.5 2.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2057 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT3840 +0.5 1.4 putative RNA-binding protein rbpA (NCBI ptt file) compare
BT1168 +0.5 0.9 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT3326 +0.5 1.5 putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain (NCBI ptt file) compare
BT0922 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT0879 +0.5 1.5 ABC transporter, permease protein (NCBI ptt file) compare
BT0188 +0.5 0.9 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1634 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT4009 +0.5 2.5 integrase (NCBI ptt file) compare
BT1133 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT1393 +0.5 2.0 4-carboxymuconolactone decarboxylase (NCBI ptt file) compare
BT1915 +0.5 2.1 pyruvate carboxylase subunit A (NCBI ptt file) compare
BT4329 +0.5 2.1 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT4601 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT1199 +0.5 1.6 putative protease (NCBI ptt file) compare
BT0335 +0.5 1.7 putative ATPase (NCBI ptt file) compare
BT4423 +0.5 1.4 xylulose kinase (NCBI ptt file) compare
BT0086 +0.4 1.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1541 +0.4 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0455 +0.4 2.4 sialidase (Neuraminidase) (NCBI ptt file) compare
BT1132 +0.4 1.2 hypothetical protein (NCBI ptt file) compare
BT1287 +0.4 2.0 hypothetical protein (NCBI ptt file) compare
BT2452 +0.4 2.1 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Bacteroides thetaiotaomicron VPI-5482

For carbon source N-Acetyl-D-Glucosamine across organisms