Experiment set31S67 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

D-Galactose 2.5 mg/ml carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT3642 +3.7 27.0 Na+-dependent transporter (NCBI ptt file) compare
BT4453 +2.4 2.5 6-pyruvoyl-tetrahydropterin synthase (NCBI ptt file) compare
BT2283 +1.8 2.9 hypothetical protein (NCBI ptt file) compare
BT3856 +1.7 3.8 hypothetical protein (NCBI ptt file) compare
BT4646 +1.5 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2237 +1.5 4.5 conserved hypothetical protein (NCBI ptt file) compare
BT4753 +1.4 1.9 hypothetical protein (NCBI ptt file) compare
BT2027 +1.3 2.4 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0844 +1.3 1.3 hypothetical protein (NCBI ptt file) compare
BT1127 +1.3 1.6 mobilization protein BmgB (NCBI ptt file) compare
BT4161 +1.3 3.1 hypothetical protein (NCBI ptt file) compare
BT0238 +1.2 2.9 transcriptional regulator (NCBI ptt file) compare
BT3839 +1.2 1.8 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0188 +1.1 2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4607 +1.1 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4763 +1.1 2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0967 +1.1 1.0 hypothetical protein (NCBI ptt file) compare
BT1962 +1.1 2.2 hypothetical protein (NCBI ptt file) compare
BT0937 +1.0 1.8 hypothetical protein (NCBI ptt file) compare
BT0417 +1.0 2.1 hypothetical protein (NCBI ptt file) compare
BT4698 +1.0 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT4271 +1.0 2.5 hypothetical protein (NCBI ptt file) compare
BT0737 +1.0 4.1 formate--tetrahydrofolate ligase (NCBI ptt file) compare
BT1262 +1.0 1.2 putative transcriptional regulator (NCBI ptt file) compare
BT1947 +0.9 1.1 hypothetical protein (NCBI ptt file) compare
BT4485 +0.9 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0877 +0.9 1.3 ferredoxin domain containing protein (NCBI ptt file) compare
BT0816 +0.9 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1369 +0.9 1.2 hypothetical protein (NCBI ptt file) compare
BT1494 +0.9 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0472 +0.9 2.0 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT3211 +0.9 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4265 +0.8 1.0 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT1903 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT4346 +0.8 1.6 conserved hypothetical protein, with a Metallo-beta-lactamase superfamily domain (NCBI ptt file) compare
BT2010 +0.8 1.4 hypothetical protein (NCBI ptt file) compare
BT1198 +0.8 2.5 LemA protein (NCBI ptt file) compare
BT1215 +0.8 2.9 ABC transporter, permease protein (NCBI ptt file) compare
BT2059 +0.8 0.8 TonB (NCBI ptt file) compare
BT1561 +0.8 0.6 hypothetical protein (NCBI ptt file) compare
BT0418 +0.8 1.5 outer membrane porin F precursor (NCBI ptt file) compare
BT0881 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT1431 +0.8 2.7 putative DNA polymerase III epsilon chain (NCBI ptt file) compare
BT1154 +0.7 1.4 ATP-independent RNA helicase (NCBI ptt file) compare
BT0090 +0.7 2.6 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1976 +0.7 1.0 hypothetical protein (NCBI ptt file) compare
BT2542 +0.7 2.4 putative haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT4531 +0.7 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT2302 +0.7 1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0848 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT0220 +0.7 1.7 hypothetical protein (NCBI ptt file) compare
BT0178 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT1917 +0.7 3.5 propionyl-CoA carboxylase beta chain (NCBI ptt file) compare
BT1112 +0.7 0.7 transposase (NCBI ptt file) compare
BT0106 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1449 +0.7 3.7 biotin carboxylase (NCBI ptt file) compare
BT0044 +0.7 1.5 putative glycosyltransferase (NCBI ptt file) compare
BT1916 +0.7 3.5 conserved hypothetical protein (NCBI ptt file) compare
BT1867 +0.7 1.7 hypothetical protein (NCBI ptt file) compare
BT0492 +0.7 2.6 integral membrane protein (NCBI ptt file) compare
BT0399 +0.7 2.5 tyrosine-protein kinase ptk involved in exopolysaccharide biosynthesis (NCBI ptt file) compare
BT3641 +0.7 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT2996 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT3891 +0.7 0.8 hypothetical protein (NCBI ptt file) compare
BT0880 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0017 +0.7 1.7 hypothetical protein (NCBI ptt file) compare
BT1041 +0.7 1.9 integrase (NCBI ptt file) compare
BT2040 +0.7 2.9 hypothetical protein (NCBI ptt file) compare
BT4141 +0.7 2.0 hypothetical protein (NCBI ptt file) compare
BT0405 +0.7 0.8 hypothetical protein (NCBI ptt file) compare
BT1146 +0.7 1.7 putative metallo-beta-lactamase (NCBI ptt file) compare
BT0382 +0.6 2.3 capsular polysaccharide biosynthesis protein Cps4K (NCBI ptt file) compare
BT0361 +0.6 2.5 hypothetical protein (NCBI ptt file) compare
BT1056 +0.6 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT4036 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT0944 +0.6 0.8 hypothetical protein (NCBI ptt file) compare
BT0965 +0.6 1.5 putative anti-sigma factor (NCBI ptt file) compare
BT2236 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT4590 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1104 +0.6 0.5 small heat shock protein (NCBI ptt file) compare
BT0839 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT4255 +0.6 1.1 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) compare
BT1424 +0.6 2.2 hypothetical protein (NCBI ptt file) compare
BT2612 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT1400 +0.6 1.9 conserved hypothetical protein (NCBI ptt file) compare
p5482_07 +0.6 5.2 mobilization protein B (NCBI) compare
BT2021 +0.6 2.5 conserved hypothetical protein, putative non-specific DNA-binding protein (NCBI ptt file) compare
BT0432 +0.6 2.2 putative endonuclease BB0411 (NCBI ptt file) compare
BT1974 +0.6 3.0 metallopeptidase family M24, putative Xaa-Pro dipeptidase (NCBI ptt file) compare
BT4676 +0.6 1.7 putative periplasmic protein (NCBI ptt file) compare
BT2039 +0.6 2.0 cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) compare
BT1021 +0.6 1.5 arabinosidase (NCBI ptt file) compare
BT0430 +0.6 2.6 indolepyruvate oxidoreductase subunit iorA (NCBI ptt file) compare
BT1116 +0.6 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3893 +0.6 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2979 +0.6 2.6 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT1881 +0.5 1.6 purine nucleoside phosphorylase I (NCBI ptt file) compare
BT2210 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT2043 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT0010 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT4643 +0.5 1.8 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3356 +0.5 2.8 6-phosphofructokinase (NCBI ptt file) compare
BT2042 +0.5 0.8 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT4554 +0.5 2.6 purine nucleoside phosphorylase II (NCBI ptt file) compare
BT4424 +0.5 1.6 sorbitol dehydrogenase (NCBI ptt file) compare
BT0601 +0.5 2.2 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4738 +0.5 3.2 formate acetyltransferase (NCBI ptt file) compare
BT4647 +0.5 1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1227 +0.5 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2218 +0.5 2.4 hypothetical protein (NCBI ptt file) compare
BT0506 +0.5 2.4 beta-hexosaminidase precursor (NCBI ptt file) compare
BT1736 +0.5 1.6 chromate transport protein (NCBI ptt file) compare
BT1709 +0.5 1.5 putative glycosyltransferase (NCBI ptt file) compare
BT3937 +0.5 1.8 TPR-domain containing protein (NCBI ptt file) compare
BT0281 +0.5 1.9 putative DNA-binding protein (NCBI ptt file) compare
BT3077 +0.5 0.3 ribonuclease R (NCBI ptt file) compare
BT1704 +0.5 0.6 hypothetical protein (NCBI ptt file) compare
BT4737 +0.5 2.2 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT0214 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT4678 +0.5 2.8 L-serine dehydratase (NCBI ptt file) compare
BT1202 +0.5 0.6 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4242 +0.5 1.8 putative transporter (NCBI ptt file) compare
BT0159 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0613 +0.5 1.1 putative membrane protein involved in polysaccharide export (NCBI ptt file) compare
BT4023 +0.5 1.9 transposase (NCBI ptt file) compare
BT1564 +0.5 0.6 conserved hypothetical protein (NCBI ptt file) compare
BT3721 +0.5 2.2 hypothetical protein (NCBI ptt file) compare
BT3284 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4736 +0.5 2.1 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0087 +0.5 0.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1071 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT1109 +0.5 1.4 ferritin A (NCBI ptt file) compare
BT1031 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4118 +0.5 2.0 putative two-component system response regulator, no kinase domain (NCBI ptt file) compare
BT0518 +0.5 1.9 Bifunctional purine biosynthesis protein, putative 5-aminoimidazole-4-carboxamide ribonucleotide(AICAR) transformylase/IMP cyclohydrolase (NCBI ptt file) compare
BT4548 +0.5 1.5 putative protein involved in transposition (NCBI ptt file) compare
BT4556 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT1132 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT1633 +0.5 1.8 mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT0549 +0.5 0.8 putative thioredoxin (NCBI ptt file) compare
BT4451 +0.5 1.2 putative MTA/SAH nucleosidase (NCBI ptt file) compare
BT1587 +0.5 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0550 +0.5 1.5 putative glycerophosphodiester phosphodiesterase (NCBI ptt file) compare
BT1634 +0.5 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0861 +0.5 2.4 putative ABC transporter permease (NCBI ptt file) compare
BT1855 +0.5 1.0 putative methyl transferase (NCBI ptt file) compare
BT0187 +0.5 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT2184 +0.5 1.8 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0246 +0.5 1.8 putative integral membrane protein, with calcineurin-like phosphoesterase domain (NCBI ptt file) compare
BT3247 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2122 +0.5 0.7 lysyl-tRNA synthetase (NCBI ptt file) compare
BT1482 +0.5 0.9 two-component system response regulator (NCBI ptt file) compare
BT2940 +0.5 2.8 multidrug resistance protein (NCBI ptt file) compare
BT1117 +0.5 0.8 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT0829 +0.5 1.5 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT2453 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT3907 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1425 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1005 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT1817 +0.5 1.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0923 +0.5 0.5 putative periplasmic protein (NCBI ptt file) compare
BT4730 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT3127 +0.4 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0645 +0.4 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1616 +0.4 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT3812 +0.4 1.6 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT2266 +0.4 1.6 hypothetical protein (NCBI ptt file) compare
BT3438 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT2099 +0.4 1.8 Fe3+ ABC transporter, permease (NCBI ptt file) compare
BT0936 +0.4 0.7 hypothetical protein (NCBI ptt file) compare
BT2537 +0.4 1.2 hypothetical protein (NCBI ptt file) compare
BT1915 +0.4 1.7 pyruvate carboxylase subunit A (NCBI ptt file) compare
BT0693 +0.4 1.4 hypothetical protein (NCBI ptt file) compare
BT1991 +0.4 1.3 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0013 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT3920 +0.4 0.6 conserved hypothetical protein (NCBI ptt file) compare
BT4712 +0.4 1.4 hypothetical protein (NCBI ptt file) compare
BT0088 +0.4 0.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0879 +0.4 1.3 ABC transporter, permease protein (NCBI ptt file) compare
BT4695 +0.4 1.7 outer membrane efflux protein precursor (NCBI ptt file) compare
BT1147 +0.4 2.1 glycine dehydrogenase [decarboxylating] (NCBI ptt file) compare
BT0450 +0.4 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0652 +0.4 0.8 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT1412 +0.4 0.7 iron-sulfur flavoprotein (NCBI ptt file) compare
BT0757 +0.4 2.1 beta-galactosidase (NCBI ptt file) compare
BT0616 +0.4 0.6 conserved hypothetical protein (NCBI ptt file) compare
BT1121 +0.4 1.7 conserved hypothetical protein, with a carboxymuconolactone decarboxylase domain (NCBI ptt file) compare
BT1637 +0.4 1.2 hypothetical protein (NCBI ptt file) compare
BT0591 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT0001 +0.4 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT4026 +0.4 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2115 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT3249 +0.4 2.0 putative zinc ABC transporter, zinc-binding protein (NCBI ptt file) compare
BT1503 +0.4 2.3 integrase (NCBI ptt file) compare
BT4527 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT0728 +0.4 1.3 transcriptional regulator (NCBI ptt file) compare
BT0794 +0.4 1.6 D-xylose-proton symporter (D-xylose transporter) (NCBI ptt file) compare
BT0067 +0.4 0.6 hypothetical protein (NCBI ptt file) compare
BT2194 +0.4 1.7 sialidase precursor, exo-alpha-sialidase (NCBI ptt file) compare
BT1282 +0.4 1.5 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in carbon source experiments

For carbon source D-Galactose across organisms