Experiment set31S60 for Bacteroides thetaiotaomicron VPI-5482

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Starch soluble; autoclaved 2.5 mg/ml carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT3642 +6.9 34.0 Na+-dependent transporter (NCBI ptt file) compare
BT1202 +4.7 3.5 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4453 +2.5 1.9 6-pyruvoyl-tetrahydropterin synthase (NCBI ptt file) compare
BT0238 +2.0 2.8 transcriptional regulator (NCBI ptt file) compare
BT0967 +1.8 1.9 hypothetical protein (NCBI ptt file) compare
BT4249 +1.7 1.9 hypothetical protein (NCBI ptt file) compare
BT4025 +1.6 2.9 hypothetical protein (NCBI ptt file) compare
BT0405 +1.6 2.4 hypothetical protein (NCBI ptt file) compare
BT0869 +1.6 2.1 hypothetical protein (NCBI ptt file) compare
BT1576 +1.5 2.2 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2490 +1.5 2.7 hypothetical protein (NCBI ptt file) compare
BT1304 +1.4 2.4 putative transcriptional regulator (NCBI ptt file) compare
BT3812 +1.4 4.4 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT0844 +1.3 1.3 hypothetical protein (NCBI ptt file) compare
BT1146 +1.3 3.6 putative metallo-beta-lactamase (NCBI ptt file) compare
BT4305 +1.2 8.7 putative alpha-amylase (NCBI ptt file) compare
BT0337 +1.2 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0313 +1.2 1.9 flavodoxin (NCBI ptt file) compare
BT1962 +1.2 2.5 hypothetical protein (NCBI ptt file) compare
BT1912 +1.2 2.5 hypothetical protein (NCBI ptt file) compare
BT0782 +1.2 1.3 hypothetical protein (NCBI ptt file) compare
BT2471 +1.2 2.6 hypothetical protein (NCBI ptt file) compare
BT1899 +1.2 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT2142 +1.2 1.5 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT4531 +1.2 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT2099 +1.1 1.8 Fe3+ ABC transporter, permease (NCBI ptt file) compare
BT4753 +1.1 1.5 hypothetical protein (NCBI ptt file) compare
BT1431 +1.1 2.2 putative DNA polymerase III epsilon chain (NCBI ptt file) compare
BT0838 +1.1 3.0 putative RNA methyltransferase (NCBI ptt file) compare
BT4763 +1.1 2.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0902 +1.0 1.7 hypothetical protein (NCBI ptt file) compare
BT2081 +1.0 2.6 hypothetical protein (NCBI ptt file) compare
BT0860 +1.0 1.6 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3262 +1.0 4.4 hypothetical protein (NCBI ptt file) compare
BT1569 +0.9 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT2684 +0.9 1.5 hypothetical protein (NCBI ptt file) compare
BT4610 +0.9 1.4 RecA (NCBI ptt file) compare
BT2799 +0.9 3.5 putative PfkB family carbohydrate kinase (NCBI ptt file) compare
BT1947 +0.9 1.1 hypothetical protein (NCBI ptt file) compare
BT1217 +0.9 2.7 two-component system response regulator (NCBI ptt file) compare
BT2208 +0.9 2.4 hypothetical protein (NCBI ptt file) compare
BT1456 +0.9 1.4 thioredoxin (TRX) (NCBI ptt file) compare
BT0429 +0.9 1.4 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT1633 +0.9 3.3 mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT4646 +0.9 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT3356 +0.9 2.4 6-phosphofructokinase (NCBI ptt file) compare
BT1466 +0.9 1.5 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2043 +0.9 1.8 hypothetical protein (NCBI ptt file) compare
BT1567 +0.8 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2841 +0.8 1.2 pyruvate kinase (NCBI ptt file) compare
BT1388 +0.8 1.6 integral membrane protein (NCBI ptt file) compare
BT1291 +0.8 2.6 spermidine/putrescine transport ATP-binding protein (NCBI ptt file) compare
BT3856 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT4046 +0.8 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0585 +0.8 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3704 SusA +0.8 4.5 SusA: alpha-amylase / neopullulanase / cyclomaltodextrinase (EC 3.2.1.135; EC 3.2.1.54) (from data) compare
BT1095 +0.8 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1315 +0.8 2.7 ribonuclease BN (NCBI ptt file) compare
BT0173 +0.8 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4423 +0.8 2.7 xylulose kinase (NCBI ptt file) compare
BT4043 +0.8 4.4 dimethyladenosine transferase (NCBI ptt file) compare
BT2010 +0.8 1.4 hypothetical protein (NCBI ptt file) compare
BT2586 +0.8 2.2 hypothetical protein (NCBI ptt file) compare
BT2283 +0.8 1.0 hypothetical protein (NCBI ptt file) compare
BT0878 +0.8 0.9 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT1974 +0.8 4.2 metallopeptidase family M24, putative Xaa-Pro dipeptidase (NCBI ptt file) compare
BT4730 +0.8 1.8 hypothetical protein (NCBI ptt file) compare
BT2116 +0.8 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT4304 +0.8 5.0 putative glycosyltransferase (NCBI ptt file) compare
BT1884 +0.8 2.0 cold shock protein, putative DNA-binding protein (NCBI ptt file) compare
BT3215 +0.8 4.0 conserved hypothetical protein (NCBI ptt file) compare
BT1295 +0.7 1.2 V-type sodium ATP synthase subunit K (NCBI ptt file) compare
BT1112 +0.7 0.7 transposase (NCBI ptt file) compare
BT0693 +0.7 2.3 hypothetical protein (NCBI ptt file) compare
BT2045 +0.7 1.0 hypothetical protein (NCBI ptt file) compare
BT1367 +0.7 1.8 hydrolase, metal-dependent (NCBI ptt file) compare
BT4451 +0.7 1.9 putative MTA/SAH nucleosidase (NCBI ptt file) compare
BT3037 +0.7 2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3734 +0.7 2.4 oxidoreductase (NCBI ptt file) compare
BT0028 +0.7 1.6 alkaline phosphatase (NCBI ptt file) compare
BT2537 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT2122 +0.7 1.0 lysyl-tRNA synthetase (NCBI ptt file) compare
BT2335 +0.7 3.1 integrase protein (NCBI ptt file) compare
BT1535 +0.7 1.4 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1440 +0.7 4.0 TonB-dependent receptor for vancomycin (SusC-like) (from data) compare
BT1811 +0.7 2.3 hypothetical protein (NCBI ptt file) compare
BT0611 +0.7 1.0 glycosyltransferase (NCBI ptt file) compare
BT3915 +0.7 0.8 hypothetical protein (NCBI ptt file) compare
BT2044 +0.7 2.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0652 +0.7 1.1 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT0877 +0.7 0.9 ferredoxin domain containing protein (NCBI ptt file) compare
BT4746 +0.7 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT1117 +0.7 1.2 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT0678 +0.7 1.5 cation efflux system protein czcC (NCBI ptt file) compare
BT0756 +0.7 0.9 iduronate 2-sulfatase precursor (NCBI ptt file) compare
BT1881 +0.7 2.0 purine nucleoside phosphorylase I (NCBI ptt file) compare
BT3641 +0.7 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0925 +0.6 1.3 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT0351 +0.6 2.4 L-arabinose isomerase (NCBI ptt file) compare
BT1909 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT1330 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0231 +0.6 0.8 excisionase (NCBI ptt file) compare
BT0646 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT4582 +0.6 3.2 amidophosphoribosyltransferase precursor (NCBI ptt file) compare
BT2449 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT0549 +0.6 1.0 putative thioredoxin (NCBI ptt file) compare
BT4704 +0.6 2.3 O-succinylbenzoic acid--CoA ligase (NCBI ptt file) compare
BT0327 +0.6 0.9 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT3979 +0.6 1.5 putative methyltransferase (NCBI ptt file) compare
BT0639 +0.6 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1928 +0.6 2.2 transposase (NCBI ptt file) compare
BT2146 +0.6 3.6 4-alpha-glucanotransferase (NCBI ptt file) compare
BT2181 +0.6 2.4 transcriptional regulator (NCBI ptt file) compare
BT4609 +0.6 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT4641 +0.6 1.8 putative acetyltransferase (NCBI ptt file) compare
BT0571 +0.6 2.1 phenylacetate-coenzyme A ligase (NCBI ptt file) compare
BT4573 +0.6 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT3249 +0.6 2.4 putative zinc ABC transporter, zinc-binding protein (NCBI ptt file) compare
BT1390 +0.6 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0188 +0.6 1.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0017 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT1817 +0.6 1.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4719 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT0730 +0.6 1.6 putative mRNA-binding protein (NCBI ptt file) compare
BT2148 +0.6 1.2 glycosyltransferase (NCBI ptt file) compare
BT4616 +0.6 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1557 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT4237 +0.6 2.1 tRNA pseudouridine synthase A (NCBI ptt file) compare
BT1969 +0.6 3.4 NADP-dependent malate dehydrogenase (NCBI ptt file) compare
BT1061 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT2265 +0.6 1.8 hypothetical protein (NCBI ptt file) compare
BT0965 +0.6 1.4 putative anti-sigma factor (NCBI ptt file) compare
BT1229 +0.6 0.7 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0021 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT1041 +0.6 1.6 integrase (NCBI ptt file) compare
BT4349 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT1104 +0.6 0.5 small heat shock protein (NCBI ptt file) compare
BT0633 +0.6 1.9 putative Na+/H+ exchange protein (NCBI ptt file) compare
BT4414 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT1232 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT4559 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1069 +0.6 1.0 conserved hypothetical protein, putative transcriptional regulator (NCBI ptt file) compare
BT4271 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT4118 +0.6 2.1 putative two-component system response regulator, no kinase domain (NCBI ptt file) compare
BT2040 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT2514 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT2979 +0.5 1.9 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT4017 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT0737 +0.5 2.0 formate--tetrahydrofolate ligase (NCBI ptt file) compare
BT2059 +0.5 0.5 TonB (NCBI ptt file) compare
BT3643 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0184 +0.5 1.6 uridine kinase (uridine monophosphokinase) (NCBI ptt file) compare
BT2741 +0.5 1.3 sigma-54 modulation protein (NCBI ptt file) compare
BT0966 +0.5 2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0734 +0.5 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0817 +0.5 1.0 lipoprotein, function unknown (NCBI ptt file) compare
BT0940 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT2115 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT3368 +0.5 0.8 putative glycosyltransferase (NCBI ptt file) compare
BT0773 +0.5 2.2 alpha-amylase 3 (NCBI ptt file) compare
BT4676 +0.5 1.5 putative periplasmic protein (NCBI ptt file) compare
BT0779 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT0125 +0.5 1.7 NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) compare
BT1392 +0.5 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT0815 +0.5 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT0778 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT2180 +0.5 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0755 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT3628 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4697 +0.5 3.8 transcriptional regulator (NCBI ptt file) compare
BT1103 +0.5 0.9 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4232 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT1400 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT3881 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT0361 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT3288 +0.5 1.2 putative integral membrane protein (NCBI ptt file) compare
BT0680 +0.5 2.4 cation efflux system protein czcA (NCBI ptt file) compare
BT1412 +0.5 0.9 iron-sulfur flavoprotein (NCBI ptt file) compare
BT4752 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0220 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT4363 +0.5 1.5 putative alkaline phosphatase (NCBI ptt file) compare
BT1255 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT4678 +0.5 2.3 L-serine dehydratase (NCBI ptt file) compare
BT1461 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT1242 +0.5 1.3 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0591 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT4070 +0.5 1.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3905 +0.5 1.8 putative alkaline protease aprF (NCBI ptt file) compare
BT2789 +0.5 2.5 chromate transport protein (NCBI ptt file) compare
BT0848 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT0816 +0.5 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT1123 +0.5 1.5 transcriptional regulator (NCBI ptt file) compare
BT0302 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT4627 +0.5 2.3 DNA modification methylase (NCBI ptt file) compare
BT0977 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT0320 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT1022 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT0521 +0.5 1.7 putative acetyl transferase (NCBI ptt file) compare
BT0723 +0.5 0.6 hypothetical protein (NCBI ptt file) compare
BT3937 +0.5 1.6 TPR-domain containing protein (NCBI ptt file) compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Starch in Bacteroides thetaiotaomicron VPI-5482

For carbon source Starch across organisms