Experiment set31S57 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT3642 +7.4 33.2 Na+-dependent transporter (NCBI ptt file) compare
BT4453 +3.0 1.9 6-pyruvoyl-tetrahydropterin synthase (NCBI ptt file) compare
BT1146 +2.4 5.7 putative metallo-beta-lactamase (NCBI ptt file) compare
BT3812 +2.2 5.3 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT0704 +1.9 2.8 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT4025 +1.9 3.0 hypothetical protein (NCBI ptt file) compare
BT4753 +1.7 1.8 hypothetical protein (NCBI ptt file) compare
BT3737 +1.7 2.5 hypothetical protein (NCBI ptt file) compare
BT2027 +1.6 2.3 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT4531 +1.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2099 +1.5 2.4 Fe3+ ABC transporter, permease (NCBI ptt file) compare
BT2042 +1.5 2.5 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT2237 +1.5 3.7 conserved hypothetical protein (NCBI ptt file) compare
BT4763 +1.5 2.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0238 +1.5 2.0 transcriptional regulator (NCBI ptt file) compare
BT0611 +1.4 2.2 glycosyltransferase (NCBI ptt file) compare
BT1145 +1.4 1.7 glucose-inhibited division protein (NCBI ptt file) compare
BT3284 +1.4 3.5 conserved hypothetical protein (NCBI ptt file) compare
BT2043 +1.3 3.5 hypothetical protein (NCBI ptt file) compare
BT1903 +1.3 3.0 hypothetical protein (NCBI ptt file) compare
BT2597 +1.3 3.5 hypothetical protein (NCBI ptt file) compare
BT1567 +1.3 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT0463 +1.3 3.6 glucose-1-phosphate thymidylyltransferase (NCBI ptt file) compare
BT1127 +1.3 1.3 mobilization protein BmgB (NCBI ptt file) compare
BT1947 +1.3 1.1 hypothetical protein (NCBI ptt file) compare
BT0462 +1.3 2.8 putative transcriptional regulator (NCBI ptt file) compare
BT0231 +1.3 1.7 excisionase (NCBI ptt file) compare
BT4646 +1.3 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT2281 +1.3 2.0 hypothetical protein (NCBI ptt file) compare
BT4582 +1.3 6.2 amidophosphoribosyltransferase precursor (NCBI ptt file) compare
BT4249 +1.2 1.2 hypothetical protein (NCBI ptt file) compare
BT0188 +1.2 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0297 +1.2 4.6 putative outer membrane lipoprotein silC precursor (NCBI ptt file) compare
BT1304 +1.2 1.7 putative transcriptional regulator (NCBI ptt file) compare
BT4328 +1.2 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0313 +1.2 1.7 flavodoxin (NCBI ptt file) compare
BT0777 +1.2 2.4 hypothetical protein (NCBI ptt file) compare
BT4434 +1.2 3.3 hypothetical protein (NCBI ptt file) compare
BT1899 +1.2 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT4529 +1.2 3.3 hypothetical protein (NCBI ptt file) compare
BT4449 +1.2 3.5 putative dehydrogenase (NCBI ptt file) compare
BT1369 +1.1 1.4 hypothetical protein (NCBI ptt file) compare
BT4746 +1.1 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2283 +1.1 1.5 hypothetical protein (NCBI ptt file) compare
BT0327 +1.1 1.8 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT0945 +1.1 3.4 hypothetical protein (NCBI ptt file) compare
BT0869 +1.1 1.6 hypothetical protein (NCBI ptt file) compare
BT0848 +1.1 2.0 hypothetical protein (NCBI ptt file) compare
BT1902 +1.1 5.4 pyrroline-5-carboxylate reductase (NCBI ptt file) compare
BT0060 +1.1 2.7 putative polysaccharide export protein (NCBI ptt file) compare
BT0376 +1.1 1.4 putative transcriptional regulator (NCBI ptt file) compare
BT4036 +1.1 1.8 hypothetical protein (NCBI ptt file) compare
BT0335 +1.1 4.2 putative ATPase (NCBI ptt file) compare
BT4643 +1.0 3.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2284 +1.0 1.8 hypothetical protein (NCBI ptt file) compare
BT2633 +1.0 3.1 hypothetical protein (NCBI ptt file) compare
BT0851 +1.0 1.8 hypothetical protein (NCBI ptt file) compare
BT1693 +1.0 2.3 periplasmic linker protein, putative multidrug resistance protein (NCBI ptt file) compare
BT1189 +1.0 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2302 +1.0 1.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1428 +1.0 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1072 +1.0 1.4 hypothetical protein (NCBI ptt file) compare
BT4451 +1.0 2.6 putative MTA/SAH nucleosidase (NCBI ptt file) compare
BT0731 +1.0 1.8 hypothetical protein (NCBI ptt file) compare
BT1470 +1.0 1.5 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT1550 +1.0 5.6 conserved hypothetical protein (NCBI ptt file) compare
BT2696 +1.0 3.4 hypothetical protein (NCBI ptt file) compare
BT0523 +1.0 3.7 putative glycosyltransferase (NCBI ptt file) compare
BT3487 +1.0 5.3 arylsulfatase (aryl-sulfate sulphohydrolase) (NCBI ptt file) compare
BT0063 +1.0 0.8 hypothetical protein (NCBI ptt file) compare
BT0817 +1.0 2.0 lipoprotein, function unknown (NCBI ptt file) compare
BT1198 +0.9 2.6 LemA protein (NCBI ptt file) compare
BT3486 +0.9 4.5 N-acetylgalactosamine-6-sulfatase precursor (NCBI ptt file) compare
BT1641 +0.9 1.2 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT2604 +0.9 4.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1388 +0.9 1.5 integral membrane protein (NCBI ptt file) compare
BT0220 +0.9 1.3 hypothetical protein (NCBI ptt file) compare
BT4612 +0.9 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0149 +0.9 2.9 peptidase (NCBI ptt file) compare
BT1539 +0.9 1.9 cytidine deaminase (NCBI ptt file) compare
BT0293 +0.9 3.1 hypothetical protein (NCBI ptt file) compare
BT4271 +0.9 2.0 hypothetical protein (NCBI ptt file) compare
BT2282 +0.9 3.7 conserved hypothetical protein (NCBI ptt file) compare
BT1616 +0.9 3.8 conserved hypothetical protein (NCBI ptt file) compare
BT0385 +0.9 4.2 conserved hypothetical protein (NCBI ptt file) compare
BT1951 +0.9 1.6 Fe3+ ABC transporter, permease protein (NCBI ptt file) compare
BT0242 +0.9 1.9 putative polysaccharide deacetylase (NCBI ptt file) compare
BT2247 +0.9 2.5 putative ryanodine receptor (NCBI ptt file) compare
BT3490 +0.9 4.3 conserved hypothetical protein, putative ATPase (NCBI ptt file) compare
BT4063 +0.9 2.3 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT3972 +0.9 3.1 putative NTP pyrophosphohydrolase (NCBI ptt file) compare
BT1411 +0.9 1.8 methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) compare
BT0475 +0.9 1.5 putative phosphoheptose isomerase (NCBI ptt file) compare
BT1868 +0.9 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT2236 +0.9 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT4587 +0.9 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0090 +0.9 3.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2626 +0.9 6.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3641 +0.9 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT2815 +0.8 2.5 putative mutT family protein (NCBI ptt file) compare
BT0429 +0.8 1.4 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT3482 +0.8 4.1 conserved hypothetical protein (NCBI ptt file) compare
BT0702 +0.8 1.6 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT0767 +0.8 2.9 putative para-aminobenzoate synthase component I (NCBI ptt file) compare
BT1071 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT0274 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT1283 +0.8 4.1 conserved hypothetical protein (NCBI ptt file) compare
BT0378 +0.8 1.2 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT4768 +0.8 2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0088 +0.8 1.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1186 +0.8 1.1 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2388 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT2294 +0.8 2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3893 +0.8 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1680 +0.8 1.8 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT2685 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT3489 +0.8 3.8 arylsulfatase B precursor (NCBI ptt file) compare
BT0323 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT0737 +0.8 2.2 formate--tetrahydrofolate ligase (NCBI ptt file) compare
BT0479 +0.8 1.2 putative glycosyltransferase (NCBI ptt file) compare
BT1623 +0.8 2.2 putative membrane protein (NCBI ptt file) compare
BT4554 +0.8 2.8 purine nucleoside phosphorylase II (NCBI ptt file) compare
BT1218 +0.8 2.4 conserved hypothetical protein, with conserved domain (NCBI ptt file) compare
BT0004 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT1825 +0.8 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT2021 +0.8 3.8 conserved hypothetical protein, putative non-specific DNA-binding protein (NCBI ptt file) compare
BT2972 +0.8 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT4548 +0.8 2.6 putative protein involved in transposition (NCBI ptt file) compare
BT4483 +0.8 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1698 +0.8 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT4180 +0.8 4.4 acetyl xylan esterase A (NCBI ptt file) compare
BT3399 +0.8 2.6 putative zinc protease (NCBI ptt file) compare
BT1451 +0.8 1.7 hypothetical protein (NCBI ptt file) compare
BT0011 +0.8 2.9 hypothetical protein (NCBI ptt file) compare
BT0350 +0.8 3.5 ribulokinase (EC 2.7.1.16) (from data) compare
BT2366 +0.8 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT4725 +0.8 3.3 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2185 +0.8 2.8 hypothetical protein (NCBI ptt file) compare
BT2625 +0.8 5.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4599 +0.8 2.4 putative transcriptional regulator (NCBI ptt file) compare
BT0012 +0.8 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT4571 +0.8 1.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4347 +0.8 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1767 +0.8 2.7 hypothetical protein (NCBI ptt file) compare
BT4730 +0.8 1.7 hypothetical protein (NCBI ptt file) compare
BT3277 +0.8 4.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4414 +0.8 1.3 hypothetical protein (NCBI ptt file) compare
BT1276 +0.8 1.7 L-fucose mutarotase FucU (EC 5.1.3.29) (from data) compare
BT1099 +0.8 3.0 putative arginase (NCBI ptt file) compare
BT2470 +0.7 3.5 hypothetical protein (NCBI ptt file) compare
BT0815 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0708 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT2627 +0.7 3.8 putative cell surface protein, have conserved domain (NCBI ptt file) compare
BT4034 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT4780 +0.7 3.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1255 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT1269 +0.7 2.9 component of multidrug efflux system (NCBI ptt file) compare
BT0730 +0.7 2.1 putative mRNA-binding protein (NCBI ptt file) compare
BT0665 +0.7 1.9 hypothetical protein (NCBI ptt file) compare
BT1215 +0.7 2.6 ABC transporter, permease protein (NCBI ptt file) compare
BT4424 +0.7 2.0 sorbitol dehydrogenase (NCBI ptt file) compare
BT1229 +0.7 0.9 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT1898 +0.7 3.8 hypothetical protein (NCBI ptt file) compare
BT4043 +0.7 3.5 dimethyladenosine transferase (NCBI ptt file) compare
BT0380 +0.7 1.7 nucleotide sugar epimerase (NCBI ptt file) compare
BT1117 +0.7 1.3 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT4509 +0.7 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT3127 +0.7 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT4737 +0.7 2.0 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT4572 +0.7 3.1 enolase (NCBI ptt file) compare
BT3901 +0.7 3.0 hypothetical protein (NCBI ptt file) compare
BT2093 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0005 +0.7 3.6 30S ribosomal protein S17 (NCBI ptt file) compare
BT2463 +0.7 2.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2174 +0.7 2.0 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1431 +0.7 1.2 putative DNA polymerase III epsilon chain (NCBI ptt file) compare
BT1994 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT1753 +0.7 2.3 putative methylated-DNA methyltransferase (NCBI ptt file) compare
BT4708 +0.7 3.6 hypothetical protein (NCBI ptt file) compare
BT0473 +0.7 2.3 putative glycosyltransferase (NCBI ptt file) compare
BT4265 +0.7 0.8 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0061 +0.7 2.0 putative tyrosine-protein kinase ptk (NCBI ptt file) compare
BT0053 +0.7 2.1 glycosyltransferase (NCBI ptt file) compare
BT3343 +0.7 2.4 putative phenylacetic acid degradation protein (NCBI ptt file) compare
BT2062 +0.7 2.8 6-phosphofructokinase (NCBI ptt file) compare
BT1267 +0.7 1.8 outer membrane protein (NCBI ptt file) compare
BT1249 +0.7 2.7 putative multidrug resistance protein (NCBI ptt file) compare
BT0215 +0.7 0.8 iron uptake regulatory protein (NCBI ptt file) compare
BT2083 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT3190 +0.7 3.6 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0214 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT4292 +0.7 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT1501 +0.7 2.0 major outer membrane protein OmpA (NCBI ptt file) compare
BT1288 +0.7 3.6 spermidine/putrescine ABC transporter (NCBI ptt file) compare
BT2081 +0.7 1.2 hypothetical protein (NCBI ptt file) compare
BT1439 +0.7 4.1 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT0751 +0.7 1.5 putative efflux pump component protein (NCBI ptt file) compare
BT4576 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT3427 +0.7 3.3 conserved hypothetical protein (NCBI ptt file) compare
BT0811 +0.7 2.2 putative tRNA/rRNA methyltransferase (NCBI ptt file) compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Mannan from Saccharomyces cerevisiae in Bacteroides thetaiotaomicron VPI-5482

For carbon source Mannan from Saccharomyces cerevisiae across organisms