Experiment set31S528 for Burkholderia phytofirmans PsJN

Compare to:

Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10

Genes with specific phenotypes:

  gene name fitness t score description  
BPHYT_RS02555 -4.6 -11.8 glutamate--cysteine ligase compare
BPHYT_RS06905 -3.7 -7.3 excinuclease ABC subunit B compare
BPHYT_RS16575 -2.9 -12.7 Xaa-Pro aminopeptidase compare
BPHYT_RS16945 -2.8 -5.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BPHYT_RS14495 -2.4 -5.4 molybdopterin-guanine dinucleotide biosynthesis protein A compare
BPHYT_RS16075 -2.4 -8.2 D-arabinitol 4-dehydrogenase compare
BPHYT_RS15750 -2.2 -6.6 elongation factor G compare
BPHYT_RS34610 -2.1 -5.9 histidine kinase compare
BPHYT_RS33635 -2.0 -9.7 AMP nucleosidase compare
BPHYT_RS18960 -1.9 -6.2 chemotaxis protein CheZ compare
BPHYT_RS33770 -1.6 -6.8 alpha-amylase compare
BPHYT_RS15470 -1.5 -6.0 tRNA (guanine-N(7)-)-methyltransferase compare
BPHYT_RS16455 -1.5 -6.4 ferritin compare
BPHYT_RS05120 -1.5 -5.5 hypothetical protein compare
BPHYT_RS01885 -1.5 -8.1 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS33775 -1.4 -6.9 alpha-amylase compare
BPHYT_RS17155 -1.3 -5.1 peptidase A24 compare
BPHYT_RS34250 +1.5 6.5 ABC transporter for L-rhamnose/L-fucose/xylitol, substrate-binding component (from data) compare
BPHYT_RS07300 +2.1 5.1 porin compare
BPHYT_RS18850 +3.3 5.7 Flagellar brake protein YcgR 1 compare
BPHYT_RS12475 +4.4 8.5 DNA mismatch repair protein MutS compare
BPHYT_RS22755 +7.0 32.6 LacI family transcription regulator compare


Specific phenotypes for in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 across organisms