Experiment set31S38 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Galactan from Potato; filtered 2.5 mg/ml carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT3642 +4.7 29.4 Na+-dependent transporter (NCBI ptt file) compare
BT4453 +1.9 1.7 6-pyruvoyl-tetrahydropterin synthase (NCBI ptt file) compare
BT2006 +1.8 2.4 hypothetical protein (NCBI ptt file) compare
BT2283 +1.7 2.8 hypothetical protein (NCBI ptt file) compare
BT2122 +1.6 2.1 lysyl-tRNA synthetase (NCBI ptt file) compare
BT4571 +1.6 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1466 +1.4 2.9 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3197 +1.4 1.2 hypothetical protein (NCBI ptt file) compare
BT1947 +1.3 1.7 hypothetical protein (NCBI ptt file) compare
BT0238 +1.3 2.5 transcriptional regulator (NCBI ptt file) compare
BT0242 +1.2 2.9 putative polysaccharide deacetylase (NCBI ptt file) compare
BT1392 +1.2 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT4649 +1.2 1.9 hypothetical protein (NCBI ptt file) compare
BT1126 +1.2 2.8 mobilization protein BmgA (NCBI ptt file) compare
BT0241 +1.1 2.0 hypothetical protein (NCBI ptt file) compare
BT0378 +1.1 1.9 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT4607 +1.1 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1962 +1.1 2.2 hypothetical protein (NCBI ptt file) compare
BT0028 +1.1 2.7 alkaline phosphatase (NCBI ptt file) compare
BT1641 +1.0 1.5 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1202 +1.0 1.5 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0418 +1.0 2.2 outer membrane porin F precursor (NCBI ptt file) compare
BT0160 +1.0 3.7 hypothetical protein (NCBI ptt file) compare
BT0321 +1.0 2.1 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT3843 +1.0 2.9 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) compare
BT3694 +1.0 2.1 glycosyltransferase (NCBI ptt file) compare
BT2072 +1.0 6.5 aconitate hydratase (NCBI ptt file) compare
BT0782 +1.0 1.6 hypothetical protein (NCBI ptt file) compare
BT1198 +1.0 3.2 LemA protein (NCBI ptt file) compare
BT4531 +1.0 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT3368 +1.0 1.7 putative glycosyltransferase (NCBI ptt file) compare
BT1693 +0.9 2.2 periplasmic linker protein, putative multidrug resistance protein (NCBI ptt file) compare
BT2116 +0.9 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2208 +0.9 2.3 hypothetical protein (NCBI ptt file) compare
BT1127 +0.9 1.1 mobilization protein BmgB (NCBI ptt file) compare
BT4763 +0.9 1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0188 +0.9 1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4422 +0.9 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0815 +0.9 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3920 +0.9 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1189 +0.9 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2584 +0.9 4.5 hypothetical protein (NCBI ptt file) compare
BT1470 +0.8 1.4 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT2490 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT0240 +0.8 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT1539 +0.8 2.0 cytidine deaminase (NCBI ptt file) compare
BT0751 +0.8 2.0 putative efflux pump component protein (NCBI ptt file) compare
BT0550 +0.8 2.7 putative glycerophosphodiester phosphodiesterase (NCBI ptt file) compare
BT0492 +0.8 3.1 integral membrane protein (NCBI ptt file) compare
BT0959 +0.8 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT0704 +0.8 1.3 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT4698 +0.8 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1255 +0.8 2.4 hypothetical protein (NCBI ptt file) compare
BT0730 +0.8 2.3 putative mRNA-binding protein (NCBI ptt file) compare
BT1329 +0.8 1.5 putative thiol peroxidase (NCBI ptt file) compare
BT0159 +0.8 3.4 conserved hypothetical protein (NCBI ptt file) compare
BT0816 +0.8 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2597 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT1982 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT2435 +0.8 1.9 MarR family transcriptional regulator (NCBI ptt file) compare
BT0549 +0.8 1.2 putative thioredoxin (NCBI ptt file) compare
BT1390 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1991 +0.7 2.4 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0519 +0.7 1.3 hypothetical protein (NCBI ptt file) compare
BT0936 +0.7 1.2 hypothetical protein (NCBI ptt file) compare
BT1951 +0.7 1.2 Fe3+ ABC transporter, permease protein (NCBI ptt file) compare
BT4610 +0.7 1.1 RecA (NCBI ptt file) compare
BT0844 +0.7 0.7 hypothetical protein (NCBI ptt file) compare
BT1753 +0.7 2.1 putative methylated-DNA methyltransferase (NCBI ptt file) compare
BT1600 +0.7 2.9 BexA, membrane proein (NCBI ptt file) compare
BT3832 +0.7 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT4548 +0.7 2.3 putative protein involved in transposition (NCBI ptt file) compare
BT0885 +0.7 1.1 putative cation efflux pump (NCBI ptt file) compare
BT0063 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT4451 +0.7 1.9 putative MTA/SAH nucleosidase (NCBI ptt file) compare
BT4753 +0.7 0.7 hypothetical protein (NCBI ptt file) compare
BT1482 +0.7 1.5 two-component system response regulator (NCBI ptt file) compare
BT1477 +0.7 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2099 +0.7 1.4 Fe3+ ABC transporter, permease (NCBI ptt file) compare
BT1132 +0.7 1.9 hypothetical protein (NCBI ptt file) compare
BT4747 +0.7 2.0 hypothetical protein (NCBI ptt file) compare
BT1855 +0.7 1.4 putative methyl transferase (NCBI ptt file) compare
BT_0687 +0.7 2.4 hydroxylamine reductase (RefSeq) compare
BT0047 +0.7 2.1 putative glycosyltransferase (NCBI ptt file) compare
BT1203 +0.7 1.3 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1163 +0.7 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT2706 +0.7 3.2 methionine aminopeptidase (NCBI ptt file) compare
BT3356 +0.7 3.0 6-phosphofructokinase (NCBI ptt file) compare
BT4435 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT3641 +0.6 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1146 +0.6 1.6 putative metallo-beta-lactamase (NCBI ptt file) compare
BT1969 +0.6 3.8 NADP-dependent malate dehydrogenase (NCBI ptt file) compare
BT2081 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT2979 +0.6 2.7 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
p5482_07 +0.6 5.7 mobilization protein B (NCBI) compare
BT0481 +0.6 1.3 polysaccharide export outer membrane protein (NCBI ptt file) compare
BT0540 +0.6 2.1 putative exopolyphosphatase (NCBI ptt file) compare
BT2781 +0.6 2.1 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT4363 +0.6 1.9 putative alkaline phosphatase (NCBI ptt file) compare
BT2042 +0.6 0.9 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT0869 +0.6 0.8 hypothetical protein (NCBI ptt file) compare
BT1788 +0.6 4.2 hypothetical protein (NCBI ptt file) compare
BT1439 +0.6 4.4 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT4534 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT3037 +0.6 2.5 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3734 +0.6 3.1 oxidoreductase (NCBI ptt file) compare
BT3772 +0.6 1.6 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
p5482_06 +0.6 3.9 mobilization protein A (NCBI) compare
BT0499 +0.6 2.0 cation efflux system protein (NCBI ptt file) compare
BT1229 +0.6 0.7 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT4641 +0.6 1.8 putative acetyltransferase (NCBI ptt file) compare
BT0004 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT3251 +0.6 3.3 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT0474 +0.6 1.6 D-glycero-D-manno-heptose 1-phosphate kinase (NCBI ptt file) compare
BT1147 +0.6 2.9 glycine dehydrogenase [decarboxylating] (NCBI ptt file) compare
BT1464 +0.6 1.5 putative acetyltransferase, (GNAT) family (NCBI ptt file) compare
BT4712 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT0676 +0.6 2.2 N-acetylglucosamine-6-phosphate deacetylase (NCBI ptt file) compare
BT3738 +0.6 4.9 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT4187 +0.6 3.2 exo-alpha-D-galacturonosidase for catabolism of rhamnogalacturonan I and polygalacturonate (from data) compare
BT0342 +0.6 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT4666 +0.6 1.2 putative K+ uptake system protein (NCBI ptt file) compare
BT0024 +0.6 1.6 transposase (NCBI ptt file) compare
BT4070 +0.6 2.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1899 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0374 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2228 +0.6 2.9 hypothetical protein (NCBI ptt file) compare
BT1660 +0.6 2.8 phosphoglycerate mutase (NCBI ptt file) compare
BT1064 +0.5 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0399 +0.5 1.9 tyrosine-protein kinase ptk involved in exopolysaccharide biosynthesis (NCBI ptt file) compare
BT0876 +0.5 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT4317 +0.5 1.4 putative lipoprotein protein (NCBI ptt file) compare
BT0756 +0.5 0.8 iduronate 2-sulfatase precursor (NCBI ptt file) compare
BT0033 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT1314 +0.5 2.5 dipeptidyl-peptidase VI (NCBI ptt file) compare
BT3812 +0.5 2.0 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT0274 +0.5 2.0 hypothetical protein (NCBI ptt file) compare
BT0463 +0.5 1.3 glucose-1-phosphate thymidylyltransferase (NCBI ptt file) compare
BT1369 +0.5 0.7 hypothetical protein (NCBI ptt file) compare
BT1953 +0.5 2.8 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT0385 +0.5 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1587 +0.5 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT3315 +0.5 1.7 hypothetical protein (NCBI ptt file) compare
BT4484 +0.5 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0231 +0.5 0.7 excisionase (NCBI ptt file) compare
BT0928 +0.5 1.3 two-component system response regulator (NCBI ptt file) compare
BT0633 +0.5 1.7 putative Na+/H+ exchange protein (NCBI ptt file) compare
BT0095 +0.5 1.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0705 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT0945 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT1197 +0.5 1.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4697 +0.5 3.7 transcriptional regulator (NCBI ptt file) compare
BT3262 +0.5 2.4 hypothetical protein (NCBI ptt file) compare
BT0119 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT0017 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT0850 +0.5 1.6 putative transcriptional regulator (NCBI ptt file) compare
BT0320 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT4346 +0.5 0.9 conserved hypothetical protein, with a Metallo-beta-lactamase superfamily domain (NCBI ptt file) compare
BT0521 +0.5 1.9 putative acetyl transferase (NCBI ptt file) compare
BT1256 +0.5 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT0902 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1399 +0.5 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT2027 +0.5 0.8 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1549 +0.5 2.4 putative secreted peptidase (NCBI ptt file) compare
BT0924 +0.5 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT4383 +0.5 1.5 putative sugar kinase (NCBI ptt file) compare
BT0853 +0.5 1.3 putative methyltransferase (NCBI ptt file) compare
BT0971 +0.5 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2321 +0.5 1.2 putative integrase (NCBI ptt file) compare
BT4719 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT4086 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT1451 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1093 +0.5 1.3 conserved hypothetical protein, putative TonB-dependent outer membrane receptor protein (NCBI ptt file) compare
BT1616 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2323 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1194 +0.5 1.5 outer membrane protein, OmpA family (NCBI ptt file) compare
BT4351 +0.5 2.0 hypothetical protein (NCBI ptt file) compare
BT1052 +0.5 1.1 putative anti-sigma factor (NCBI ptt file) compare
BT0313 +0.5 0.7 flavodoxin (NCBI ptt file) compare
BT0443 +0.5 0.5 thermostable beta-glucosidase B (NCBI ptt file) compare
BT0737 +0.4 1.8 formate--tetrahydrofolate ligase (NCBI ptt file) compare
BT0613 +0.4 1.0 putative membrane protein involved in polysaccharide export (NCBI ptt file) compare
BT3399 +0.4 2.1 putative zinc protease (NCBI ptt file) compare
BT0050 +0.4 1.9 putative glycosyltransferase (NCBI ptt file) compare
BT4704 +0.4 1.6 O-succinylbenzoic acid--CoA ligase (NCBI ptt file) compare
BT1637 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT1196 +0.4 1.8 pyruvate carboxylase subunit B) (NCBI ptt file) compare
BT1055 +0.4 0.7 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT4495 +0.4 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0692 +0.4 0.9 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare
BT1440 +0.4 2.5 TonB-dependent receptor for vancomycin (SusC-like) (from data) compare
BT4764 +0.4 0.7 hypothetical protein (NCBI ptt file) compare
BT1612 +0.4 1.2 hypothetical protein (NCBI ptt file) compare
BT0213 +0.4 1.6 hypothetical protein (NCBI ptt file) compare
BT2266 +0.4 1.4 hypothetical protein (NCBI ptt file) compare
BT1072 +0.4 0.6 hypothetical protein (NCBI ptt file) compare
BT0634 +0.4 1.9 Na+/H+ antiporter 1 (NCBI ptt file) compare
BT0739 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT0431 +0.4 1.5 conserved hypothetical protein with conserved domain (NCBI ptt file) compare
BT0255 +0.4 1.0 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in carbon source experiments

For carbon source Galactan from Potato across organisms