Experiment set31S35 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Galactan from Potato; autoclaved 2.5 mg/ml carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT3642 +3.7 25.1 Na+-dependent transporter (NCBI ptt file) compare
BT0405 +1.7 2.6 hypothetical protein (NCBI ptt file) compare
BT4453 +1.6 1.8 6-pyruvoyl-tetrahydropterin synthase (NCBI ptt file) compare
BT0816 +1.5 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2027 +1.5 2.7 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1127 +1.5 1.8 mobilization protein BmgB (NCBI ptt file) compare
BT0418 +1.4 3.1 outer membrane porin F precursor (NCBI ptt file) compare
BT3839 +1.3 1.9 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2946 +1.2 2.1 putative glycosyltransferase (NCBI ptt file) compare
BT2281 +1.2 2.1 hypothetical protein (NCBI ptt file) compare
BT0238 +1.1 2.8 transcriptional regulator (NCBI ptt file) compare
BT1808 +1.1 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2283 +1.0 1.5 hypothetical protein (NCBI ptt file) compare
BT0378 +1.0 1.6 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT2006 +1.0 1.6 hypothetical protein (NCBI ptt file) compare
BT0242 +1.0 2.3 putative polysaccharide deacetylase (NCBI ptt file) compare
BT1146 +1.0 2.7 putative metallo-beta-lactamase (NCBI ptt file) compare
BT3843 +1.0 3.6 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) compare
BT0376 +1.0 1.6 putative transcriptional regulator (NCBI ptt file) compare
BT1947 +1.0 1.2 hypothetical protein (NCBI ptt file) compare
BT1704 +0.9 1.2 hypothetical protein (NCBI ptt file) compare
BT0844 +0.9 0.9 hypothetical protein (NCBI ptt file) compare
BT3368 +0.9 1.4 putative glycosyltransferase (NCBI ptt file) compare
BT0017 +0.9 2.1 hypothetical protein (NCBI ptt file) compare
BT0782 +0.9 1.4 hypothetical protein (NCBI ptt file) compare
BT1198 +0.9 2.8 LemA protein (NCBI ptt file) compare
BT0178 +0.9 1.7 hypothetical protein (NCBI ptt file) compare
BT0241 +0.9 1.6 hypothetical protein (NCBI ptt file) compare
BT3738 +0.9 7.7 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT1069 +0.9 1.6 conserved hypothetical protein, putative transcriptional regulator (NCBI ptt file) compare
BT1561 +0.9 0.8 hypothetical protein (NCBI ptt file) compare
BT1504 +0.8 3.8 hypothetical protein (NCBI ptt file) compare
BT2208 +0.8 2.1 hypothetical protein (NCBI ptt file) compare
BT2284 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT0122 +0.8 2.8 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) compare
BT0297 +0.8 2.9 putative outer membrane lipoprotein silC precursor (NCBI ptt file) compare
BT4610 +0.8 1.3 RecA (NCBI ptt file) compare
BT0479 +0.8 1.2 putative glycosyltransferase (NCBI ptt file) compare
BT0240 +0.8 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1569 +0.8 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1493 +0.8 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT4746 +0.8 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT2321 +0.8 2.1 putative integrase (NCBI ptt file) compare
BT1202 +0.8 1.0 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1117 +0.8 1.5 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT2979 +0.8 3.4 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0869 +0.8 1.0 hypothetical protein (NCBI ptt file) compare
BT1197 +0.8 1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3812 +0.8 2.9 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT1817 +0.8 1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2781 +0.8 2.7 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT1456 +0.8 1.4 thioredoxin (TRX) (NCBI ptt file) compare
BT3502 +0.8 2.6 hypothetical protein (NCBI ptt file) compare
BT3037 +0.8 2.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3856 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT1470 +0.7 1.2 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT2045 +0.7 1.0 hypothetical protein (NCBI ptt file) compare
BT0860 +0.7 1.1 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3641 +0.7 3.3 conserved hypothetical protein (NCBI ptt file) compare
BT3643 +0.7 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT3510 +0.7 2.5 hypothetical protein (NCBI ptt file) compare
BT0160 +0.7 2.7 hypothetical protein (NCBI ptt file) compare
BT0693 +0.7 2.5 hypothetical protein (NCBI ptt file) compare
BT0159 +0.7 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1369 +0.7 1.0 hypothetical protein (NCBI ptt file) compare
BT0814 +0.7 1.4 conserved hypothetical protein, putative outer membrane protein (NCBI ptt file) compare
BT0885 +0.7 1.1 putative cation efflux pump (NCBI ptt file) compare
BT0472 +0.7 1.6 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT1914 +0.7 2.4 thioredoxin-like protein, putative thioredoxin (NCBI ptt file) compare
BT1428 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2043 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT0992 +0.7 2.6 beta-galactosidase (NCBI ptt file) compare
BT0848 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT1163 +0.7 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4383 +0.7 2.2 putative sugar kinase (NCBI ptt file) compare
BT0593 +0.7 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1656 +0.7 1.1 putative transcriptional regulator (NCBI ptt file) compare
BT4029 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT2435 +0.7 2.5 MarR family transcriptional regulator (NCBI ptt file) compare
BT2742 +0.7 0.7 integrase, site-specific recombinase (NCBI ptt file) compare
BT0087 +0.7 1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0967 +0.7 0.7 hypothetical protein (NCBI ptt file) compare
BT0945 +0.7 2.0 hypothetical protein (NCBI ptt file) compare
BT1400 +0.7 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4422 +0.7 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0256 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT0949 +0.7 1.1 hypothetical protein (NCBI ptt file) compare
BT4531 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1534 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0411 +0.7 1.7 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT0879 +0.7 2.1 ABC transporter, permease protein (NCBI ptt file) compare
BT2539 +0.7 2.3 rubredoxin (NCBI ptt file) compare
BT2072 +0.7 4.2 aconitate hydratase (NCBI ptt file) compare
BT2116 +0.7 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3262 +0.7 3.4 hypothetical protein (NCBI ptt file) compare
BT4017 +0.7 1.7 hypothetical protein (NCBI ptt file) compare
BT2040 +0.7 2.7 hypothetical protein (NCBI ptt file) compare
BT0548 +0.6 1.5 diaminopimelate epimerase (NCBI ptt file) compare
BT4435 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT0492 +0.6 2.4 integral membrane protein (NCBI ptt file) compare
BT0544 +0.6 1.9 ammonium transporter (NCBI ptt file) compare
BT0028 +0.6 1.5 alkaline phosphatase (NCBI ptt file) compare
BT0470 +0.6 3.0 hypothetical protein (NCBI ptt file) compare
BT4763 +0.6 1.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4730 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT2929 +0.6 2.1 putative non-specific DNA-binding protein (NCBI ptt file) compare
BT1125 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT1147 +0.6 3.1 glycine dehydrogenase [decarboxylating] (NCBI ptt file) compare
BT0380 +0.6 1.8 nucleotide sugar epimerase (NCBI ptt file) compare
BT4384 +0.6 1.8 hypothetical protein (NCBI ptt file) compare
BT4641 +0.6 1.9 putative acetyltransferase (NCBI ptt file) compare
BT4697 +0.6 4.5 transcriptional regulator (NCBI ptt file) compare
BT0842 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT1093 +0.6 1.7 conserved hypothetical protein, putative TonB-dependent outer membrane receptor protein (NCBI ptt file) compare
BT0512 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT2542 +0.6 2.1 putative haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT2081 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT4414 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT3694 +0.6 1.1 glycosyltransferase (NCBI ptt file) compare
BT1276 +0.6 1.6 L-fucose mutarotase FucU (EC 5.1.3.29) (from data) compare
BT0855 +0.6 2.1 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1736 +0.6 1.8 chromate transport protein (NCBI ptt file) compare
BT2583 +0.6 2.9 hypothetical protein (NCBI ptt file) compare
BT4607 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1558 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT0188 +0.6 1.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0877 +0.6 0.8 ferredoxin domain containing protein (NCBI ptt file) compare
BT1140 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT3251 +0.6 3.2 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT2799 +0.6 2.0 putative PfkB family carbohydrate kinase (NCBI ptt file) compare
BT4582 +0.6 2.9 amidophosphoribosyltransferase precursor (NCBI ptt file) compare
BT0740 +0.6 0.7 flavoredoxin (NCBI ptt file) compare
BT1260 +0.6 2.2 putative peptidase (NCBI ptt file) compare
BT0463 +0.6 1.4 glucose-1-phosphate thymidylyltransferase (NCBI ptt file) compare
BT0069 +0.6 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0917 +0.6 1.6 competence-damage inducible protein (NCBI ptt file) compare
BT0705 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT0004 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT0646 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT1503 +0.6 2.5 integrase (NCBI ptt file) compare
BT4014 +0.5 3.3 putative type II restriction endonuclease (NCBI ptt file) compare
BT4483 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1905 +0.5 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0448 +0.5 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1390 +0.5 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT4421 +0.5 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT0060 +0.5 1.5 putative polysaccharide export protein (NCBI ptt file) compare
BT0313 +0.5 0.8 flavodoxin (NCBI ptt file) compare
BT0023 +0.5 1.8 transposase (NCBI ptt file) compare
BT0067 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT1518 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT1439 +0.5 4.0 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT0783 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT0635 +0.5 0.9 putative transcriptional regulator (NCBI ptt file) compare
BT0758 +0.5 1.0 acetyltransferase (NCBI ptt file) compare
BT0631 +0.5 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT0513 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT4429 +0.5 2.1 putative pteridine-dependent dioxygenase (NCBI ptt file) compare
BT4753 +0.5 0.7 hypothetical protein (NCBI ptt file) compare
BT0896 +0.5 0.9 putative patatin-like phospholipase (NCBI ptt file) compare
BT4304 +0.5 3.6 putative glycosyltransferase (NCBI ptt file) compare
BT2067 +0.5 2.4 putative NADH:flavin oxidoreductase (NCBI ptt file) compare
BT3832 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT4643 +0.5 1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1257 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1884 +0.5 2.4 cold shock protein, putative DNA-binding protein (NCBI ptt file) compare
BT0270 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT3628 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4305 +0.5 3.6 putative alpha-amylase (NCBI ptt file) compare
BT0564 +0.5 1.8 putative ABC transporter permease protein (NCBI ptt file) compare
BT3356 +0.5 2.7 6-phosphofructokinase (NCBI ptt file) compare
BT1109 +0.5 1.5 ferritin A (NCBI ptt file) compare
BT1440 +0.5 2.9 TonB-dependent receptor for vancomycin (SusC-like) (from data) compare
BT1436 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT2059 +0.5 0.5 TonB (NCBI ptt file) compare
BT0429 +0.5 0.8 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT1326 +0.5 0.7 TPR-domain containing protein (NCBI ptt file) compare
BT0902 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1009 +0.5 1.1 dihydroorotate dehydrogenase (NCBI ptt file) compare
p5482_06 +0.5 2.8 mobilization protein A (NCBI) compare
BT0795 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1329 +0.5 0.9 putative thiol peroxidase (NCBI ptt file) compare
BT1920 +0.5 2.0 hypothetical protein (NCBI ptt file) compare
BT4381 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT0118 +0.5 1.8 putative cytochrome c biogenesis protein (NCBI ptt file) compare
BT1113 +0.5 1.7 flavodoxin (NCBI ptt file) compare
BT0310 +0.5 2.3 lipoate-protein ligase A (NCBI ptt file) compare
BT4534 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT4177 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT2309 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT2417 +0.5 0.7 conserved hypothetical protein (NCBI ptt file) compare
BT1482 +0.5 0.9 two-component system response regulator (NCBI ptt file) compare
BT3865 +0.5 2.4 hypothetical protein (NCBI ptt file) compare
BT4161 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1021 +0.5 1.3 arabinosidase (NCBI ptt file) compare
BT1289 +0.5 1.5 putrescine transport system permease protein potI (NCBI ptt file) compare
BT0431 +0.5 1.6 conserved hypothetical protein with conserved domain (NCBI ptt file) compare
BT3737 +0.5 0.6 hypothetical protein (NCBI ptt file) compare
BT0194 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT2741 +0.5 1.2 sigma-54 modulation protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in carbon source experiments

For carbon source Galactan from Potato across organisms