Experiment set30IT037 for Klebsiella michiganensis M5al

Compare to:

KLEB15 MOI 10

Group: phage
Media: LB_plus_SM_buffer + KLEB15 MOI 10 + Kan (50 ug/ml)
Culturing: Koxy_ML2a, 48 well microplate; Epoch2, Aerobic, at 30 (C), shaken=double orbital, continuous, 205cpm
By: Vivek on 12/1/21
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride

Specific Phenotypes

For 2 genes in this experiment

For phage KLEB15 MOI 10 in Klebsiella michiganensis M5al

For phage KLEB15 MOI 10 across organisms

SEED Subsystems

Subsystem #Specific
LOS core oligosaccharide biosynthesis 1
linker unit-arabinogalactan synthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
UDP-α-D-galactofuranose biosynthesis 2 1 1
dTDP-β-D-fucofuranose biosynthesis 4 3 1
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 6 4 1
O-antigen building blocks biosynthesis (E. coli) 11 11 1
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 18 1 1
superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis 19 9 1
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 33 13 1