Experiment set30IT034 for Klebsiella michiganensis M5al

Compare to:

KLEB14 MOI 0.1

Group: phage
Media: LB_plus_SM_buffer + KLEB14 MOI 0.1 + Kan (50 ug/ml)
Culturing: Koxy_ML2a, 48 well microplate; Epoch2, Aerobic, at 30 (C), shaken=double orbital, continuous, 205cpm
By: Vivek on 1-Dec-21
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride

Specific Phenotypes

For 6 genes in this experiment

For phage KLEB14 MOI 0.1 in Klebsiella michiganensis M5al

For phage KLEB14 MOI 0.1 across organisms

SEED Subsystems

Subsystem #Specific
Colanic acid biosynthesis 1
LOS core oligosaccharide biosynthesis 1
linker unit-arabinogalactan synthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
UDP-α-D-galactofuranose biosynthesis 2 1 1
dTDP-β-D-fucofuranose biosynthesis 4 3 1
Salmonella enterica serotype O:3,10 O antigen biosynthesis 5 2 1
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 6 4 1
Salmonella enterica serotype O:9 O antigen biosynthesis 6 2 1
Salmonella enterica serotype O:9,46 O antigen biosynthesis 6 2 1
Salmonella enterica serotype O:4 O antigen biosynthesis (group B1) 6 2 1
Porphyromonas gingivalis O-LPS antigen biosynthesis 6 2 1
Salmonella enterica serotype O:2 O antigen biosynthesis 6 2 1
Salmonella enterica serotype O:8 O antigen biosynthesis 8 1 1
Salmonella enterica serotype O:9,46,27 O antigen biosynthesis 9 2 1
O-antigen building blocks biosynthesis (E. coli) 11 11 1
succinoglycan biosynthesis 14 1 1
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 18 1 1
superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis 19 9 1
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 33 13 1