Experiment set2S602 for Mycobacterium tuberculosis H37Rv
Sodium D-Lactate 10 mM carbon source
Group: carbon sourceMedia: Sautons minimal media with no carbon + Sodium D-Lactate (10 mM)
Culturing: MycoTube_ML10, tube, Aerobic, at 37 (C)
By: Kayla Dinshaw on 10/2/23
Media components: 0.8 g/L Sodium Chloride, 2.5 g/L Disodium phosphate, 1 g/L Potassium phosphate monobasic, 0.2 g/L L-Asparagine, 0.05 g/L Ferric ammonium citrate, 0.02 g/L Magnesium sulfate, 0.0005 g/L Calcium chloride, 1e-05 g/L Zinc sulfate heptahydrate, 0.2 vol% Ethanol, 0.05 vol% Tyloxapol
Specific Phenotypes
For 2 genes in this experiment
For carbon source Sodium D-Lactate in Mycobacterium tuberculosis H37Rv
For carbon source Sodium D-Lactate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Glutathione analogs: mycothiol | 1 |
| Glycolate, glyoxylate interconversions | 1 |
| Photorespiration (oxidative C2 cycle) | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| glycolate and glyoxylate degradation II | 2 | 2 | 1 |
| glycolate and glyoxylate degradation III | 3 | 1 | 1 |
| glycolate and glyoxylate degradation I | 4 | 1 | 1 |
| superpathway of glycol metabolism and degradation | 7 | 3 | 1 |
| lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales) | 8 | 4 | 1 |
| photorespiration III | 9 | 4 | 1 |
| photorespiration I | 9 | 4 | 1 |
| photorespiration II | 10 | 4 | 1 |