Experiment set2S586 for Mycobacterium tuberculosis H37Rv

Compare to:

7H9 with Meropenem 9.6 ug/mL

200 most detrimental genes:

  gene name fitness t score description  
Rv3428c +2.2 3.3 Possible transposase compare
Rv3143 +1.8 1.9 Probable response regulator compare
Rv0983 +1.6 11.2 Probable serine protease PepD (serine proteinase) (MTB32B) compare
Rv1675c +1.5 3.1 Probable transcriptional regulatory protein Cmr compare
Rv0545c +1.5 2.6 Probable low-affinity inorganic phosphate transporter integral membrane protein PitA compare
Rv3295 +1.5 12.6 Probable transcriptional regulatory protein (probably TetR-family) compare
Rv2752c +1.5 10.0 Conserved hypothetical protein compare
Rv1234 +1.3 2.2 Probable transmembrane protein compare
Rv3220c +1.2 4.2 Probable two component sensor kinase compare
Rv3314c +1.2 2.2 Probable thymidine phosphorylase DeoA (tdrpase) (pyrimidine phosphorylase) compare
Rv2989 +1.2 1.8 Probable transcriptional regulatory protein compare
Rv3193c +1.2 2.1 Probable conserved transmembrane protein compare
Rv1626 +1.1 5.5 Probable two-component system transcriptional regulator compare
Rv3819 +1.1 0.8 Unknown protein compare
Rv2633c +1.1 5.7 Hypothetical protein compare
Rv3328c +1.1 3.8 Probable alternative RNA polymerase sigma factor (fragment) SigJ compare
Rv2781c +1.1 5.8 Possible alanine rich oxidoreductase compare
Rv0674 +1.1 1.5 Conserved hypothetical protein compare
Rv2072c +1.0 1.5 Precorrin-6Y C(5,15)-methyltransferase (decarboxylating) CobL compare
Rv0468 +1.0 4.0 3-hydroxybutyryl-CoA dehydrogenase FadB2 (beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) compare
Rv2758c +1.0 1.8 Possible antitoxin VapB21 compare
Rv2292c +1.0 1.6 Hypothetical protein compare
Rv1798 +1.0 1.2 ESX conserved component EccA5. ESX-5 type VII secretion system protein. compare
Rv0561c +1.0 2.0 Possible oxidoreductase compare
Rv2897c +1.0 2.0 Conserved hypothetical protein compare
Rv1792 +1.0 1.8 ESAT-6 like protein EsxM compare
Rv0758 +1.0 1.9 Possible two component system response sensor kinase membrane associated PhoR compare
Rv2382c +1.0 1.4 Polyketide synthetase MbtC (polyketide synthase) compare
Rv1963c +1.0 1.3 Probable transcriptional repressor (probably TetR-family) Mce3R compare
Rv1401 +1.0 1.4 Possible membrane protein compare
Rv1303 +0.9 1.3 Conserved hypothetical transmembrane protein compare
Rv2681 +0.9 4.2 Conserved hypothetical alanine rich protein compare
Rv2586c +0.9 1.7 Probable protein-export membrane protein SecF compare
Rv0098 +0.9 1.3 Probable fatty acyl CoA thioesterase type III FcoT compare
Rv2867c +0.9 5.4 GCN5-related N-acetyltransferase compare
Rv3085 +0.9 1.2 Probable short-chain type dehydrogenase/reductase compare
Rv3135 +0.9 3.8 PPE family protein PPE50 compare
Rv0084 +0.9 1.1 Possible formate hydrogenlyase HycD (FHL) compare
Rv2657c +0.9 0.8 Probable PhiRv2 prophage protein compare
Rv0113 +0.9 1.1 Probable sedoheptulose-7-phosphate isomerase GmhA (phosphoheptose isomerase) compare
Rv2140c +0.8 1.9 Conserved protein TB18.6 compare
Rv0841 +0.8 1.4 Probable conserved transmembrane protein compare
Rv0451c +0.8 1.1 Probable conserved membrane protein MmpS4 compare
Rv2432c +0.8 0.9 Hypothetical protein compare
Rv3230c +0.8 3.9 Hypothetical oxidoreductase compare
Rv2091c +0.8 3.6 Probable membrane protein compare
Rv3538 +0.8 1.4 Probable dehydrogenase. Possible 2-enoyl acyl-CoA hydratase. compare
Rv0540 +0.8 1.2 Conserved hypothetical protein compare
Rv0554 +0.8 5.4 Possible peroxidase BpoC (non-haem peroxidase) compare
Rv3069 +0.8 2.4 Probable conserved transmembrane protein compare
Rv0085 +0.8 0.9 Possible hydrogenase HycP compare
Rv3331 +0.8 2.9 Probable sugar-transport integral membrane protein SugI compare
Rv3651 +0.7 1.3 Conserved hypothetical protein compare
Rv1140 +0.7 2.3 Probable integral membrane protein compare
Rv0496 +0.7 1.4 Conserved hypothetical protein compare
Rv3716c +0.7 0.8 Conserved protein compare
Rv1929c +0.7 1.9 Conserved hypothetical protein compare
Rv0955 +0.7 0.8 Probable conserved integral membrane protein compare
Rv1691 +0.7 1.8 Conserved hypothetical protein compare
Rv3893c +0.7 1.9 PE family protein PE36 compare
Rv2801c +0.7 0.8 Toxin MazF9 compare
Rv3136 +0.7 3.9 PPE family protein PPE51 compare
Rv3136A +0.7 4.9 Conserved protein compare
Rv1468c +0.7 1.7 PE-PGRS family protein PE_PGRS29 compare
Rv0985c +0.7 2.5 Possible large-conductance ion mechanosensitive channel MscL compare
Rv2782c +0.7 2.3 Probable zinc protease PepR compare
Rv1046c +0.7 1.4 Hypothetical protein compare
Rv1276c +0.7 1.5 Conserved hypothetical protein compare
Rv2506 +0.7 2.8 Probable transcriptional regulatory protein (probably TetR-family) compare
Rv1193 +0.7 2.4 Probable fatty-acid-CoA ligase FadD36 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) compare
Rv0323c +0.7 0.9 Conserved hypothetical protein compare
Rv3073c +0.7 1.0 Conserved hypothetical protein compare
Rv2474c +0.6 1.2 Conserved hypothetical protein compare
Rv1919c +0.6 2.7 Conserved protein compare
Rv3207c +0.6 1.5 Conserved protein compare
Rv3161c +0.6 2.3 Possible dioxygenase compare
Rv3663c +0.6 2.2 Probable dipeptide-transport ATP-binding protein ABC transporter DppD compare
Rv2383c +0.6 1.6 Phenyloxazoline synthase MbtB (phenyloxazoline synthetase) compare
Rv3394c +0.6 2.0 Conserved hypothetical protein compare
Rv2873 +0.6 2.4 Cell surface lipoprotein Mpt83 (lipoprotein P23) compare
Rv3389c +0.6 1.8 Probable 3-hydroxyacyl-thioester dehydratase HtdY compare
Rv0275c +0.6 1.7 Possible transcriptional regulatory protein (possibly TetR-family) compare
Rv2237A +0.6 0.7 Conserved protein compare
Rv3166c +0.6 1.5 Conserved hypothetical protein compare
Rv0270 +0.6 4.0 Probable fatty-acid-CoA ligase FadD2 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) compare
Rv2683 +0.6 0.7 Conserved protein compare
Rv2901c +0.6 2.3 Conserved protein compare
Rv0737 +0.6 1.4 Possible transcriptional regulatory protein compare
Rv0901 +0.6 2.1 Possible conserved exported or membrane protein compare
Rv0995 +0.6 1.2 Ribosomal-protein-alanine acetyltransferase RimJ (acetylating enzyme for N-terminal of ribosomal protein S5) compare
Rv3321c +0.6 2.1 Possible antitoxin VapB44 compare
Rv2798c +0.6 0.9 Conserved hypothetical protein compare
Rv3532 +0.6 1.8 PPE family protein PPE61 compare
Rv2378c +0.6 1.6 Lysine-N-oxygenase MbtG (L-lysine 6-monooxygenase) (lysine N6-hydroxylase) compare
Rv0043c +0.6 1.2 Probable transcriptional regulatory protein (probably GntR-family) compare
Rv3286c +0.6 0.9 Alternative RNA polymerase sigma factor SigF compare
Rv3664c +0.6 1.7 Probable dipeptide-transport integral membrane protein ABC transporter DppC compare
Rv0974c +0.6 1.5 Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2 compare
Rv0182c +0.6 2.3 Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) compare
Rv0934 +0.6 2.1 Periplasmic phosphate-binding lipoprotein PstS1 (PBP-1) (PstS1) compare
Rv2522c +0.6 1.7 Conserved hypothetical protein compare
Rv3058c +0.6 3.2 Possible transcriptional regulatory protein (probably TetR-family) compare
Rv1192 +0.6 1.7 Unknown protein compare
Rv1147 +0.6 2.2 Conserved protein compare
Rv2575 +0.6 1.8 Possible conserved membrane glycine rich protein compare
Rv1788 +0.6 2.8 PE family protein PE18 compare
Rv0905 +0.6 0.9 Possible enoyl-CoA hydratase EchA6 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv3032A +0.6 1.4 Conserved protein compare
Rv0681 +0.5 2.5 Probable transcriptional regulatory protein (possibly TetR-family) compare
Rv0564c +0.5 1.5 Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) compare
Rv1444c +0.5 0.8 Unknown protein compare
Rv3885c +0.5 1.4 ESX conserved component EccE2. ESX-2 type VII secretion system protein. Possible membrane protein. compare
Rv0319 +0.5 2.4 Probable pyrrolidone-carboxylate peptidase Pcp (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) (PGP-I) (pyrase) compare
Rv2275 +0.5 0.9 Conserved hypothetical protein compare
Rv0642c +0.5 0.7 Methoxy mycolic acid synthase 4 MmaA4 (methyl mycolic acid synthase 4) (MMA4) (hydroxy mycolic acid synthase) compare
Rv0587 +0.5 1.7 Conserved hypothetical integral membrane protein YrbE2A compare
Rv2558 +0.5 1.8 Conserved protein compare
Rv2042c +0.5 1.7 Conserved protein compare
Rv2647 +0.5 0.8 Hypothetical protein compare
Rv1169c +0.5 1.3 PE family protein. Possible lipase LipX. compare
Rv2434c +0.5 2.2 Probable conserved transmembrane protein compare
Rv0660c +0.5 2.8 Possible antitoxin MazE2 compare
Rv2414c +0.5 1.8 Conserved hypothetical protein compare
Rv1470 +0.5 2.8 Probable thioredoxin TrxA compare
Rv3177 +0.5 1.1 Possible peroxidase (non-haem peroxidase) compare
Rv1181 +0.5 3.1 Probable polyketide beta-ketoacyl synthase Pks4 compare
Rv0868c +0.5 1.2 Probable molybdenum cofactor biosynthesis protein D 2 MoaD2 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor, subunit 1) compare
Rv2026c +0.5 0.7 Universal stress protein family protein compare
Rv2599 +0.5 2.3 Probable conserved membrane protein compare
Rv2767c +0.5 2.0 Possible membrane protein compare
Rv1054 +0.5 1.9 Probable integrase (fragment) compare
Rv3178 +0.5 1.9 Conserved hypothetical protein compare
Rv2259 +0.5 1.0 S-nitrosomycothiol reductase MscR compare
Rv1526c +0.5 2.2 Probable glycosyltransferase compare
Rv0370c +0.5 0.8 Possible oxidoreductase compare
Rv2427c +0.5 1.6 Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) compare
Rv0984 +0.5 1.6 Possible pterin-4-alpha-carbinolamine dehydratase MoaB2 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD) compare
Rv1956 +0.5 3.9 Possible antitoxin HigA compare
Rv0310c +0.5 1.3 Conserved protein compare
Rv0029 +0.5 1.9 Conserved hypothetical protein compare
Rv2437 +0.5 1.4 Conserved transmembrane protein compare
Rv1171 +0.5 1.7 Conserved hypothetical protein compare
Rv3647c +0.5 0.6 Conserved hypothetical protein compare
Rv2033c +0.5 1.8 Conserved hypothetical protein compare
Rv1616 +0.5 1.3 Conserved membrane protein compare
Rv1159A +0.5 1.1 Unknown protein compare
Rv1608c +0.5 1.9 Probable peroxidoxin BcpB compare
Rv1353c +0.5 0.7 Probable transcriptional regulatory protein compare
Rv3431c +0.5 2.7 Possible transposase (fragment) compare
Rv0918 +0.5 1.2 Conserved protein compare
Rv3229c +0.5 1.2 Possible linoleoyl-CoA desaturase (delta(6)-desaturase) compare
Rv0250c +0.5 1.4 Conserved protein compare
Rv1528c +0.5 1.7 Probable conserved polyketide synthase associated protein PapA4 compare
Rv0068 +0.5 1.9 Probable oxidoreductase compare
Rv2623 +0.5 1.4 Universal stress protein family protein TB31.7 compare
Rv0964c +0.5 0.8 Hypothetical protein compare
Rv3560c +0.5 0.9 Probable acyl-CoA dehydrogenase FadE30 compare
Rv3098c +0.5 0.9 Hypothetical protein compare
Rv3820c +0.5 3.8 Possible conserved polyketide synthase associated protein PapA2 compare
Rv3692 +0.5 2.0 Probable methanol dehydrogenase transcriptional regulatory protein MoxR2 compare
Rv1662 +0.5 1.7 Probable polyketide synthase Pks8 compare
Rv1533 +0.5 1.6 Conserved protein compare
Rv2331 +0.5 1.5 Hypothetical protein compare
Rv0940c +0.5 1.0 Possible oxidoreductase compare
Rv0249c +0.5 1.3 Probable succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase) compare
Rv3196 +0.5 1.5 Conserved hypothetical protein compare
Rv0578c +0.5 2.3 PE-PGRS family protein PE_PGRS7 compare
Rv3446c +0.5 1.7 Hypothetical alanine and valine rich protein compare
Rv3416 +0.5 1.0 Transcriptional regulatory protein WhiB-like WhiB3. Contains [4FE-4S] cluster. compare
Rv2277c +0.5 0.6 Possible glycerolphosphodiesterase compare
Rv0474 +0.4 2.6 Probable transcriptional regulatory protein compare
Rv1930c +0.4 0.5 Conserved hypothetical protein compare
Rv0590A +0.4 1.2 Mce-family related protein compare
Rv2208 +0.4 1.0 Probable cobalamin 5'-phosphate synthase CobS compare
Rv0449c +0.4 2.8 Conserved hypothetical protein compare
Rv3435c +0.4 0.9 Probable conserved transmembrane protein compare
Rv2621c +0.4 0.9 Possible transcriptional regulatory protein compare
Rv2929 +0.4 2.3 Hypothetical protein compare
Rv1957 +0.4 0.6 Hypothetical protein compare
Rv0450c +0.4 2.9 Probable conserved transmembrane transport protein MmpL4 compare
Rv2422 +0.4 1.7 Hypothetical protein compare
Rv3853 +0.4 2.1 Regulator of RNase E activity a RraA compare
Rv0356c +0.4 1.0 Conserved protein compare
Rv1789 +0.4 3.0 PPE family protein PPE26 compare
Rv3565 +0.4 0.8 Possible aspartate aminotransferase AspB (transaminase A) (ASPAT) (glutamic--oxaloacetic transaminase) (glutamic--aspartic transaminase) compare
Rv1235 +0.4 1.4 Probable sugar-binding lipoprotein LpqY compare
Rv2622 +0.4 1.9 Possible methyltransferase (methylase) compare
Rv2858c +0.4 2.4 Probable aldehyde dehydrogenase AldC compare
Rv0045c +0.4 1.4 Possible hydrolase compare
Rv0762c +0.4 1.4 Conserved hypothetical protein compare
Rv3413c +0.4 0.6 Unknown alanine and proline rich protein compare
Rv2576c +0.4 1.0 Possible conserved membrane protein compare
Rv0426c +0.4 1.1 Possible transmembrane protein compare
Rv3912 +0.4 0.9 Hypothetical alanine rich protein compare
Rv2384 +0.4 1.2 Bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-ArCP synthetase compare
Rv3829c +0.4 2.7 Probable dehydrogenase compare
Rv3826 +0.4 2.2 Probable fatty-acid-AMP ligase FadD23 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase) compare
Rv1372 +0.4 1.0 Conserved hypothetical protein compare
Rv1120c +0.4 1.5 Conserved hypothetical protein compare
Rv1967 +0.4 1.4 Mce-family protein Mce3B compare


Specific Phenotypes

For 7 genes in this experiment

For stress Meropenem in Mycobacterium tuberculosis H37Rv

For stress Meropenem across organisms