Experiment set2S586 for Mycobacterium tuberculosis H37Rv

Compare to:

7H9 with Meropenem 9.6 ug/mL

Group: stress
Media: 7H9 + Meropenem (9.6 ug/mL)
Culturing: MycoTube_ML10, tube, Aerobic, at 37 (C)
By: Kayla Dinshaw on 10/1/23
Media components: 0.5 g/L Ammonium Sulfate, 0.5 g/L L-Glutamic acid, 0.1 g/L Trisodium citrate dihydrate, 0.001 g/L Pyridoxine HCl, 0.0005 g/L biotin, 2.5 g/L Disodium phosphate, 1 g/L Potassium phosphate monobasic, 0.04 g/L Ferric ammonium citrate, 0.05 g/L Magnesium sulfate, 0.0005 g/L Calcium chloride, 0.001 g/L Zinc sulfate heptahydrate, 0.001 g/L copper (II) chloride dihydrate, 5 g/L bovine serum albumin, 2 g/L D-Glucose, 4.25 g/L Sodium Chloride, 0.5 vol% Tween 80

Specific Phenotypes

For 7 genes in this experiment

For stress Meropenem in Mycobacterium tuberculosis H37Rv

For stress Meropenem across organisms

SEED Subsystems

Subsystem #Specific
Bacterial Cell Division 1
Bacterial Cytoskeleton 1
Beta-lactamase 1
Flagellum in Campylobacter 1
Glycerolipid and Glycerophospholipid Metabolism in Bacteria 1
Peptidoglycan Biosynthesis 1
Phosphate metabolism 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
phospholipid remodeling (phosphatidate, yeast) 2 1 1
palmitoleate biosynthesis III (cyanobacteria) 2 1 1
oleate biosynthesis III (cyanobacteria) 3 2 1
CDP-diacylglycerol biosynthesis I 4 4 1
CDP-diacylglycerol biosynthesis II 4 4 1
phosphatidate biosynthesis (yeast) 5 3 1
CDP-diacylglycerol biosynthesis III 5 3 1
phosphatidylglycerol biosynthesis II 6 5 1
phosphatidylglycerol biosynthesis I 6 5 1
superpathway of phospholipid biosynthesis III (E. coli) 12 9 2
superpathway of stearidonate biosynthesis (cyanobacteria) 6 2 1
palmitoyl ethanolamide biosynthesis 6 2 1
diacylglycerol and triacylglycerol biosynthesis 7 3 1
stigma estolide biosynthesis 7 2 1
anandamide biosynthesis II 8 2 1
peptidoglycan biosynthesis IV (Enterococcus faecium) 17 12 2
peptidoglycan biosynthesis II (staphylococci) 17 12 2
peptidoglycan biosynthesis V (β-lactam resistance) 17 11 2
peptidoglycan biosynthesis I (meso-diaminopimelate containing) 12 11 1
anandamide biosynthesis I 12 3 1
peptidoglycan maturation (meso-diaminopimelate containing) 12 3 1
superpathway of cardiolipin biosynthesis (bacteria) 13 7 1
superpathway of phospholipid biosynthesis II (plants) 28 9 2
peptidoglycan biosynthesis III (mycobacteria) 15 14 1
plasmalogen biosynthesis I (aerobic) 16 3 1