Experiment set2S557 for Synechocystis sp000284455 PCC 6803

Compare to:

Sodium nitrate nitrogen source

200 most important genes:

  gene name fitness t score description  
SGL_RS03625 -11.7 -5.9 glycosyltransferase family 1 protein compare
SGL_RS03550 -10.4 -14.3 CDP-glucose 4,6-dehydratase compare
SGL_RS03540 -9.7 -6.7 ABC transporter ATP-binding protein compare
SGL_RS10775 -9.6 -6.6 DUF3326 domain-containing protein compare
SGL_RS02375 -9.5 -9.3 DUF3086 domain-containing protein compare
SGL_RS13555 -9.1 -5.0 aldehyde oxygenase (deformylating) compare
SGL_RS03520 -8.9 -6.1 ABC transporter permease compare
SGL_RS09820 -8.8 -4.8 ribosome maturation factor RimM compare
SGL_RS05375 -8.8 -4.7 hypothetical protein compare
SGL_RS03950 -8.7 -6.0 homocysteine biosynthesis protein compare
SGL_RS05390 -8.5 -5.9 Na(+)/H(+) antiporter subunit B compare
SGL_RS05385 -8.5 -5.9 DUF4040 domain-containing protein compare
SGL_RS18365 -8.4 -8.2 glycosyltransferase family 9 protein compare
SGL_RS12870 -8.3 -5.7 YqeG family HAD IIIA-type phosphatase compare
SGL_RS15130 -8.2 -8.8 dTDP-glucose 4,6-dehydratase compare
SGL_RS13495 -8.0 -12.3 AarF/ABC1/UbiB kinase family protein compare
SGL_RS02460 -7.9 -5.4 phosphate signaling complex protein PhoU compare
SGL_RS16705 -7.9 -5.4 diadenylate cyclase CdaA compare
SGL_RS13910 -7.7 -5.9 phasin family protein compare
SGL_RS06675 -7.7 -5.3 ABC transporter ATP-binding protein compare
SGL_RS05380 -7.7 -4.1 monovalent cation/H(+) antiporter subunit G compare
SGL_RS12335 -7.6 -5.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS17330 -7.6 -10.4 biosynthetic arginine decarboxylase compare
SGL_RS10305 -7.5 -8.9 PIN/TRAM domain-containing protein compare
SGL_RS03775 -7.5 -5.2 membrane protein compare
SGL_RS06130 -7.4 -5.1 anti-sigma regulatory factor compare
SGL_RS06020 -7.3 -5.0 sugar ABC transporter permease compare
SGL_RS03560 -7.2 -9.3 class I SAM-dependent methyltransferase compare
SGL_RS05880 -7.1 -4.9 sugar ABC transporter substrate-binding protein compare
SGL_RS11510 -7.1 -4.9 dihydroneopterin aldolase compare
SGL_RS15045 -7.0 -6.8 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS15425 -7.0 -9.3 cobalamin biosynthesis protein CobW compare
SGL_RS05370 -7.0 -2.2 Na+/H+ antiporter subunit E compare
SGL_RS12490 -6.9 -4.8 glutamate--cysteine ligase compare
SGL_RS13870 -6.8 -4.7 rRNA maturation RNase YbeY compare
SGL_RS12770 -6.8 -4.7 uroporphyrinogen-III C-methyltransferase compare
SGL_RS02145 -6.8 -15.8 metallophosphoesterase compare
SGL_RS04510 -6.8 -9.5 DUF561 domain-containing protein compare
SGL_RS16950 -6.8 -13.7 phosphoketolase compare
SGL_RS03545 -6.7 -4.3 glucose-1-phosphate cytidylyltransferase compare
SGL_RS04735 -6.7 -4.6 hypothetical protein compare
SGL_RS06355 -6.6 -4.2 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS14430 -6.5 -4.5 cobalt ECF transporter T component CbiQ compare
SGL_RS08115 -6.5 -6.3 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS05435 -6.5 -4.5 heavy metal translocating P-type ATPase compare
SGL_RS11025 -6.5 -8.9 oxidoreductase compare
SGL_RS17125 -6.5 -6.8 inositol monophosphatase family protein compare
SGL_RS03840 -6.5 -4.1 adenylyl-sulfate kinase compare
SGL_RS15700 -6.4 -10.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS03590 -6.4 -7.3 ATP-grasp domain-containing protein compare
SGL_RS06595 -6.4 -4.4 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS16545 -6.4 -15.9 LdpA C-terminal domain-containing domain compare
SGL_RS02095 -6.3 -6.9 dTDP-4-dehydrorhamnose reductase compare
SGL_RS07840 -6.3 -4.3 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS07200 -6.3 -6.1 LCP family protein compare
SGL_RS08790 -6.3 -3.9 carbohydrate ABC transporter permease compare
SGL_RS06430 -6.3 -3.4 glycosyltransferase family 2 protein compare
SGL_RS11000 -6.2 -4.3 sulfate adenylyltransferase compare
SGL_RS05980 -6.2 -4.3 hypothetical protein compare
SGL_RS11305 -6.2 -6.0 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS07870 -6.1 -4.2 Ycf51 family protein compare
SGL_RS02580 -6.1 -3.8 DUF1818 family protein compare
SGL_RS12545 -6.0 -3.6 GTPase Era compare
SGL_RS16880 -6.0 -3.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS14920 -6.0 -4.1 cation:proton antiporter compare
SGL_RS03585 -5.9 -10.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS06585 -5.9 -4.1 nitrate ABC transporter ATP-binding protein compare
SGL_RS12920 -5.9 -3.5 hypothetical protein compare
SGL_RS09845 -5.8 -8.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS16100 -5.8 -4.0 heavy metal translocating P-type ATPase compare
SGL_RS03555 -5.7 -16.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS02665 -5.7 -3.1 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS10370 -5.7 -11.4 anthranilate synthase component I compare
SGL_RS14540 -5.7 -3.0 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS14445 -5.7 -3.9 hypothetical protein compare
SGL_RS03085 -5.7 -4.8 DUF2862 domain-containing protein compare
SGL_RS17810 -5.7 -18.2 iron uptake porin compare
SGL_RS03250 -5.7 -7.0 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS16940 -5.6 -5.2 dephospho-CoA kinase compare
SGL_RS06590 -5.6 -6.6 nitrate ABC transporter permease compare
SGL_RS17470 -5.6 -3.8 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS13370 -5.6 -4.6 exonuclease SbcCD subunit D compare
SGL_RS17305 -5.5 -3.8 pyrroline-5-carboxylate reductase compare
SGL_RS02260 -5.5 -3.4 HEAT repeat domain-containing protein compare
SGL_RS05560 -5.5 -3.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS17495 -5.5 -9.9 peptidoglycan editing factor PgeF compare
SGL_RS12575 -5.5 -3.7 riboflavin synthase compare
SGL_RS08275 -5.4 -3.7 tetratricopeptide repeat protein compare
SGL_RS19585 -5.4 -4.5 hypothetical protein compare
SGL_RS03365 -5.4 -6.1 Ycf66 family protein compare
SGL_RS03060 -5.4 -7.1 phosphoadenosine phosphosulfate reductase compare
SGL_RS14860 -5.4 -3.7 8-amino-7-oxononanoate synthase compare
SGL_RS08605 -5.4 -7.4 DUF3120 domain-containing protein compare
SGL_RS14425 -5.4 -3.7 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS05470 -5.4 -3.7 dihydropteroate synthase compare
SGL_RS18300 -5.3 -3.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS04230 -5.3 -5.2 exonuclease subunit SbcC compare
SGL_RS04490 -5.3 -4.0 2TM domain-containing protein compare
SGL_RS12030 -5.3 -10.0 extracellular solute-binding protein compare
SGL_RS08710 -5.2 -3.6 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS13055 -5.2 -3.6 protein translocase subunit SecF compare
SGL_RS04525 -5.2 -3.6 photosynthesis system II assembly factor Ycf48 compare
SGL_RS12585 -5.1 -3.5 ABC transporter permease subunit compare
SGL_RS05440 -5.1 -3.5 ACP S-malonyltransferase compare
SGL_RS06600 -5.1 -13.2 anthranilate phosphoribosyltransferase family protein compare
SGL_RS07605 -5.1 -3.5 HEAT repeat domain-containing protein compare
SGL_RS09395 -5.1 -3.5 aldo/keto reductase compare
SGL_RS17230 -5.1 -11.5 L-aspartate oxidase compare
SGL_RS08175 -5.0 -3.4 serine hydrolase compare
SGL_RS03380 -5.0 -13.6 sulfite reductase, ferredoxin dependent compare
SGL_RS17520 -4.9 -3.4 DUF3352 domain-containing protein compare
SGL_RS14335 -4.9 -3.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS17650 -4.9 -4.5 hypothetical protein compare
SGL_RS11835 -4.9 -5.0 transcription antitermination factor NusB compare
SGL_RS10320 -4.8 -3.3 ribosome biogenesis GTPase Der compare
SGL_RS16735 -4.8 -3.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS14105 -4.8 -3.3 2-succinylbenzoate--CoA ligase compare
SGL_RS14045 -4.8 -6.5 hypothetical protein compare
SGL_RS13550 -4.7 -3.4 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS12910 -4.7 -9.5 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS16860 -4.7 -11.3 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS13535 -4.7 -3.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS09160 -4.7 -4.1 thioredoxin family protein compare
SGL_RS03425 -4.7 -3.2 precorrin-3B C(17)-methyltransferase compare
SGL_RS05210 -4.7 -14.0 SLBB domain-containing protein compare
SGL_RS04390 -4.7 -3.5 DUF433 domain-containing protein compare
SGL_RS15560 -4.6 -3.2 dethiobiotin synthase compare
SGL_RS09385 -4.6 -3.2 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS08495 -4.6 -15.7 DUF3370 domain-containing protein compare
SGL_RS03185 -4.6 -3.1 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS13560 -4.6 -17.3 glucose-1-phosphate thymidylyltransferase compare
SGL_RS15655 -4.6 -19.1 asparaginase compare
SGL_RS03790 -4.6 -3.1 GTPase ObgE compare
SGL_RS13510 -4.5 -7.3 transglycosylase domain-containing protein compare
SGL_RS18320 -4.5 -15.6 serine/threonine-protein kinase compare
SGL_RS15620 -4.5 -3.0 cobyric acid synthase CobQ compare
SGL_RS08535 -4.5 -3.2 NIL domain-containing protein compare
SGL_RS04660 -4.4 -9.5 phycobilisome rod-core linker polypeptide compare
SGL_RS14930 -4.4 -11.0 type I methionyl aminopeptidase compare
SGL_RS18180 -4.4 -7.3 ABC transporter permease compare
SGL_RS04775 -4.3 -9.5 alpha/beta hydrolase compare
SGL_RS09720 -4.3 -3.0 beta-ketoacyl-ACP synthase compare
SGL_RS12235 -4.3 -4.0 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS11135 -4.3 -1.8 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS02850 -4.3 -7.0 uracil phosphoribosyltransferase compare
SGL_RS15435 -4.3 -15.5 PD40 domain-containing protein compare
SGL_RS03970 -4.3 -2.9 thiamine phosphate synthase compare
SGL_RS14435 -4.3 -1.9 cobalt transporter CbiM compare
SGL_RS18215 -4.3 -5.5 pentapeptide repeat-containing protein compare
SGL_RS14585 -4.2 -3.2 TolB family protein compare
SGL_RS17405 -4.2 -9.7 L-2-hydroxyglutarate oxidase compare
SGL_RS10155 -4.2 -6.8 hypothetical protein compare
SGL_RS02220 -4.2 -2.9 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS01900 -4.1 -8.0 GDP-L-fucose synthase compare
SGL_RS07935 -4.1 -5.6 hypothetical protein compare
SGL_RS12400 -4.1 -2.8 lysophospholipid acyltransferase family protein compare
SGL_RS04720 -4.0 -2.8 iron uptake porin compare
SGL_RS04155 -4.0 -3.6 reverse transcriptase domain-containing protein compare
SGL_RS14905 -4.0 -6.5 30S ribosomal protein PSRP-3 compare
SGL_RS15870 -4.0 -10.7 septum site-determining protein MinC compare
SGL_RS13685 -4.0 -14.1 ABC transporter ATP-binding protein compare
SGL_RS13900 -4.0 -16.9 AI-2E family transporter compare
SGL_RS14505 -4.0 -7.3 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS08765 -3.9 -2.4 2-phosphosulfolactate phosphatase family protein compare
SGL_RS06460 -3.9 -9.2 fatty acid desaturase compare
SGL_RS05235 -3.9 -5.0 phycobilisome linker polypeptide compare
SGL_RS16360 -3.9 -2.6 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS02475 -3.9 -4.4 YlxR family protein compare
SGL_RS11985 -3.8 -2.6 LysR family transcriptional regulator compare
SGL_RS17270 -3.8 -5.4 hypothetical protein compare
SGL_RS11675 -3.8 -7.1 chromophore lyase CpcT/CpeT compare
SGL_RS01905 -3.8 -19.5 GDP-mannose 4,6-dehydratase compare
SGL_RS13770 -3.8 -2.0 DUF3082 domain-containing protein compare
SGL_RS02955 -3.7 -6.2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS06440 -3.7 -4.1 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS15865 -3.7 -5.6 septum site-determining protein MinD compare
SGL_RS11945 -3.7 -13.3 sirohydrochlorin chelatase compare
SGL_RS00195 -3.7 -15.6 glycosyltransferase family 2 protein compare
SGL_RS05240 -3.7 -5.8 phycobilisome linker polypeptide compare
SGL_RS13905 -3.7 -6.8 hypothetical protein compare
SGL_RS13465 -3.7 -15.2 class II fumarate hydratase compare
SGL_RS15530 -3.7 -2.5 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS17340 -3.6 -3.6 quinolinate synthase NadA compare
SGL_RS04360 -3.5 -10.1 5-formyltetrahydrofolate cyclo-ligase compare
SGL_RS09890 -3.5 -4.0 DUF3007 family protein compare
SGL_RS05480 -3.5 -6.8 FAD-dependent oxidoreductase compare
SGL_RS13855 -3.5 -11.5 hypothetical protein compare
SGL_RS05465 -3.4 -3.6 hypothetical protein compare
SGL_RS06755 -3.4 -8.0 bacterioferritin-associated ferredoxin compare
SGL_RS00830 -3.4 -6.8 hypothetical protein compare
SGL_RS17685 -3.4 -9.1 ArsB/NhaD family transporter compare
SGL_RS12755 -3.4 -12.8 IMS domain-containing protein compare
SGL_RS10130 -3.3 -20.6 fatty acid desaturase compare
SGL_RS00825 -3.3 -8.2 hypothetical protein compare
SGL_RS18170 -3.2 -5.1 PspA/IM30 family protein compare
SGL_RS05355 -3.2 -14.0 cation:proton antiporter compare
SGL_RS15785 -3.2 -15.4 ParA family protein compare
SGL_RS15790 -3.1 -11.2 hypothetical protein compare
SGL_RS07105 -3.1 -7.8 precorrin-6Y C5,15-methyltransferase subunit CbiT compare
SGL_RS05320 -2.9 -10.2 PBP1A family penicillin-binding protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in nitrogen source experiments

For nitrogen source Sodium nitrate across organisms