Experiment set2S556 for Synechocystis sp000284455 PCC 6803

Compare to:

Sodium nitrite nitrogen source

200 most important genes:

  gene name fitness t score description  
SGL_RS08650 -7.4 -5.1 S-layer homology domain-containing protein compare
SGL_RS13910 -7.4 -4.3 phasin family protein compare
SGL_RS02375 -7.1 -4.9 DUF3086 domain-containing protein compare
SGL_RS03540 -6.9 -4.8 ABC transporter ATP-binding protein compare
SGL_RS02795 -6.4 -4.4 flavin prenyltransferase UbiX compare
SGL_RS13855 -6.4 -4.4 hypothetical protein compare
SGL_RS03625 -6.3 -11.1 glycosyltransferase family 1 protein compare
SGL_RS13495 -6.3 -4.3 AarF/ABC1/UbiB kinase family protein compare
SGL_RS02850 -6.2 -6.0 uracil phosphoribosyltransferase compare
SGL_RS03520 -6.1 -4.2 ABC transporter permease compare
SGL_RS06455 -6.0 -10.6 guanitoxin biosynthesis MATE family efflux transporter GntT compare
SGL_RS05375 -6.0 -3.6 hypothetical protein compare
SGL_RS11035 -5.9 -5.4 LapA family protein compare
SGL_RS15435 -5.9 -6.5 PD40 domain-containing protein compare
SGL_RS05390 -5.7 -3.9 Na(+)/H(+) antiporter subunit B compare
SGL_RS05385 -5.6 -3.9 DUF4040 domain-containing protein compare
SGL_RS10305 -5.5 -3.8 PIN/TRAM domain-containing protein compare
SGL_RS12870 -5.5 -3.8 YqeG family HAD IIIA-type phosphatase compare
SGL_RS13905 -5.4 -3.7 hypothetical protein compare
SGL_RS10130 -5.3 -12.0 fatty acid desaturase compare
SGL_RS03420 -5.3 -3.7 UbiD family decarboxylase compare
SGL_RS17330 -5.3 -3.7 biosynthetic arginine decarboxylase compare
SGL_RS02520 -5.3 -2.7 thioredoxin-dependent thiol peroxidase compare
SGL_RS17125 -5.2 -3.6 inositol monophosphatase family protein compare
SGL_RS12820 -5.2 -9.4 1,4-alpha-glucan branching enzyme compare
SGL_RS05370 -5.2 -1.8 Na+/H+ antiporter subunit E compare
SGL_RS09970 -5.1 -4.5 DUF29 domain-containing protein compare
SGL_RS15425 -5.1 -3.5 cobalamin biosynthesis protein CobW compare
SGL_RS02460 -5.1 -3.5 phosphate signaling complex protein PhoU compare
SGL_RS12340 -5.0 -10.7 hypothetical protein compare
SGL_RS02145 -5.0 -6.8 metallophosphoesterase compare
SGL_RS03450 -5.0 -6.8 permease compare
SGL_RS13900 -4.9 -11.5 AI-2E family transporter compare
SGL_RS04810 -4.9 -1.7 AarF/ABC1/UbiB kinase family protein compare
SGL_RS06675 -4.9 -3.4 ABC transporter ATP-binding protein compare
SGL_RS10370 -4.9 -5.4 anthranilate synthase component I compare
SGL_RS05380 -4.8 -2.9 monovalent cation/H(+) antiporter subunit G compare
SGL_RS18170 -4.8 -2.9 PspA/IM30 family protein compare
SGL_RS03090 -4.8 -12.6 ArsA family ATPase compare
SGL_RS03775 -4.7 -3.2 membrane protein compare
SGL_RS17810 -4.6 -13.1 iron uptake porin compare
SGL_RS17130 -4.6 -13.8 hypothetical protein compare
SGL_RS15865 -4.6 -3.1 septum site-determining protein MinD compare
SGL_RS06020 -4.5 -3.1 sugar ABC transporter permease compare
SGL_RS14695 -4.5 -4.4 DUF2839 domain-containing protein compare
SGL_RS06110 -4.5 -4.3 glycosyltransferase family 4 protein compare
SGL_RS03365 -4.4 -3.0 Ycf66 family protein compare
SGL_RS03085 -4.4 -2.2 DUF2862 domain-containing protein compare
SGL_RS16955 -4.4 -8.9 site-2 protease family protein compare
SGL_RS11510 -4.3 -2.9 dihydroneopterin aldolase compare
SGL_RS16940 -4.3 -2.9 dephospho-CoA kinase compare
SGL_RS05880 -4.2 -2.9 sugar ABC transporter substrate-binding protein compare
SGL_RS18365 -4.2 -11.5 glycosyltransferase family 9 protein compare
SGL_RS03380 -4.2 -6.4 sulfite reductase, ferredoxin dependent compare
SGL_RS13455 -4.2 -8.2 RDD family protein compare
SGL_RS04155 -4.2 -2.9 reverse transcriptase domain-containing protein compare
SGL_RS16705 -4.1 -4.9 diadenylate cyclase CdaA compare
SGL_RS11305 -4.1 -2.8 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS11850 -4.1 -5.6 hypothetical protein compare
SGL_RS06130 -4.0 -3.9 anti-sigma regulatory factor compare
SGL_RS18095 -4.0 -8.9 TIGR03943 family protein compare
SGL_RS12910 -4.0 -6.1 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS12770 -4.0 -2.7 uroporphyrinogen-III C-methyltransferase compare
SGL_RS07200 -3.9 -2.7 LCP family protein compare
SGL_RS03490 -3.9 -5.0 YaaW family protein compare
SGL_RS18320 -3.9 -10.7 serine/threonine-protein kinase compare
SGL_RS18475 -3.9 -7.1 metalloregulator ArsR/SmtB family transcription factor compare
SGL_RS09890 -3.8 -3.8 DUF3007 family protein compare
SGL_RS07100 -3.8 -13.7 glycogen/starch/alpha-glucan phosphorylase compare
SGL_RS14430 -3.8 -2.6 cobalt ECF transporter T component CbiQ compare
SGL_RS13195 -3.8 -4.5 Ig-like domain-containing protein compare
SGL_RS20080 -3.8 -1.9 DUF4335 domain-containing protein compare
SGL_RS13510 -3.8 -5.1 transglycosylase domain-containing protein compare
SGL_RS05950 -3.7 -7.1 hypothetical protein compare
SGL_RS03840 -3.7 -2.5 adenylyl-sulfate kinase compare
SGL_RS09160 -3.7 -1.7 thioredoxin family protein compare
SGL_RS04025 -3.7 -8.5 proton extrusion protein PcxA compare
SGL_RS12030 -3.6 -3.5 extracellular solute-binding protein compare
SGL_RS05435 -3.6 -2.5 heavy metal translocating P-type ATPase compare
SGL_RS03460 -3.6 -11.6 hypothetical protein compare
SGL_RS08115 -3.5 -4.2 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS03870 -3.5 -11.2 histidinol dehydrogenase compare
SGL_RS03935 -3.5 -11.8 SLC13 family permease compare
SGL_RS15870 -3.4 -5.7 septum site-determining protein MinC compare
SGL_RS06430 -3.4 -2.0 glycosyltransferase family 2 protein compare
SGL_RS11000 -3.4 -2.4 sulfate adenylyltransferase compare
SGL_RS06600 -3.4 -10.8 anthranilate phosphoribosyltransferase family protein compare
SGL_RS06490 -3.4 -6.3 permease compare
SGL_RS00825 -3.4 -6.4 hypothetical protein compare
SGL_RS12490 -3.3 -4.5 glutamate--cysteine ligase compare
SGL_RS07870 -3.3 -2.3 Ycf51 family protein compare
SGL_RS09820 -3.3 -3.9 ribosome maturation factor RimM compare
SGL_RS11240 -3.3 -2.0 photosystem I reaction center subunit IV compare
SGL_RS03550 -3.3 -12.7 CDP-glucose 4,6-dehydratase compare
SGL_RS15775 -3.3 -12.6 AarF/ABC1/UbiB kinase family protein compare
SGL_RS03060 -3.2 -5.3 phosphoadenosine phosphosulfate reductase compare
SGL_RS11855 -3.2 -1.5 YtxH domain-containing protein compare
SGL_RS13170 -3.2 -4.5 histidine kinase compare
SGL_RS17650 -3.2 -2.2 hypothetical protein compare
SGL_RS14585 -3.1 -1.5 TolB family protein compare
SGL_RS08435 -3.1 -9.1 hypothetical protein compare
SGL_RS17175 -3.1 -4.1 allophycocyanin subunit beta compare
SGL_RS19400 -3.1 -2.9 hypothetical protein compare
SGL_RS09640 -3.1 -11.9 peptide chain release factor N(5)-glutamine methyltransferase compare
SGL_RS16880 -3.1 -2.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS08790 -3.0 -2.9 carbohydrate ABC transporter permease compare
SGL_RS03240 -3.0 -10.8 YggT family protein compare
SGL_RS07840 -3.0 -2.6 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS14045 -2.9 -4.6 hypothetical protein compare
SGL_RS12920 -2.9 -1.9 hypothetical protein compare
SGL_RS17500 -2.9 -5.4 DUF370 domain-containing protein compare
SGL_RS00830 -2.9 -2.6 hypothetical protein compare
SGL_RS05465 -2.9 -2.0 hypothetical protein compare
SGL_RS14445 -2.9 -2.0 hypothetical protein compare
SGL_RS02665 -2.9 -1.7 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS17760 -2.8 -5.6 circadian clock protein KaiC compare
SGL_RS16100 -2.8 -1.9 heavy metal translocating P-type ATPase compare
SGL_RS06460 -2.8 -6.6 fatty acid desaturase compare
SGL_RS04660 -2.8 -5.1 phycobilisome rod-core linker polypeptide compare
SGL_RS02580 -2.8 -2.7 DUF1818 family protein compare
SGL_RS03265 -2.8 -1.9 photosystem II complex extrinsic protein PsbU compare
SGL_RS05450 -2.8 -4.5 YbjN domain-containing protein compare
SGL_RS06040 -2.8 -12.2 DUF1997 domain-containing protein compare
SGL_RS04490 -2.7 -2.3 2TM domain-containing protein compare
SGL_RS02525 -2.7 -2.8 hypothetical protein compare
SGL_RS11025 -2.7 -6.7 oxidoreductase compare
SGL_RS10155 -2.7 -1.8 hypothetical protein compare
SGL_RS14400 -2.6 -18.2 cation:proton antiporter compare
SGL_RS17470 -2.6 -1.8 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS11675 -2.6 -3.0 chromophore lyase CpcT/CpeT compare
SGL_RS15805 -2.6 -4.9 two component system response regulator RpaA compare
SGL_RS02845 -2.6 -1.3 thylakoid membrane protein compare
SGL_RS05560 -2.6 -1.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS17305 -2.6 -1.8 pyrroline-5-carboxylate reductase compare
SGL_RS14860 -2.6 -1.8 8-amino-7-oxononanoate synthase compare
SGL_RS03895 -2.6 -6.2 MBL fold metallo-hydrolase compare
SGL_RS12515 -2.6 -2.2 hypothetical protein compare
SGL_RS14435 -2.6 -1.3 cobalt transporter CbiM compare
SGL_RS02260 -2.6 -1.7 HEAT repeat domain-containing protein compare
SGL_RS11135 -2.6 -1.2 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS12575 -2.5 -1.7 riboflavin synthase compare
SGL_RS19585 -2.5 -3.4 hypothetical protein compare
SGL_RS05415 -2.5 -3.8 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
SGL_RS18030 -2.5 -7.6 SRPBCC family protein compare
SGL_RS08780 -2.5 -4.4 hypothetical protein compare
SGL_RS09305 -2.5 -4.9 adenosyl-hopene transferase HpnH compare
SGL_RS18300 -2.5 -1.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS12755 -2.4 -7.5 IMS domain-containing protein compare
SGL_RS05470 -2.4 -1.7 dihydropteroate synthase compare
SGL_RS05355 -2.4 -9.3 cation:proton antiporter compare
SGL_RS13870 -2.4 -3.3 rRNA maturation RNase YbeY compare
SGL_RS09975 -2.4 -3.4 DUF29 domain-containing protein compare
SGL_RS04650 -2.4 -12.0 tetratricopeptide repeat protein compare
SGL_RS17495 -2.4 -6.0 peptidoglycan editing factor PgeF compare
SGL_RS14425 -2.4 -2.3 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS11005 -2.3 -11.2 glycosyltransferase compare
SGL_RS08710 -2.3 -1.6 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS04360 -2.3 -7.8 5-formyltetrahydrofolate cyclo-ligase compare
SGL_RS09795 -2.3 -10.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
SGL_RS15495 -2.3 -9.3 Fe(3+) ABC transporter substrate-binding protein compare
SGL_RS13055 -2.3 -1.6 protein translocase subunit SecF compare
SGL_RS12930 -2.3 -1.6 DUF1257 domain-containing protein compare
SGL_RS08275 -2.3 -2.6 tetratricopeptide repeat protein compare
SGL_RS00320 -2.3 -4.5 helix-turn-helix transcriptional regulator compare
SGL_RS08145 -2.3 -4.6 ribosomal protein S18-alanine N-acetyltransferase compare
SGL_RS07250 -2.2 -6.4 aminotransferase class IV compare
SGL_RS05400 -2.2 -2.0 Crp/Fnr family transcriptional regulator compare
SGL_RS05440 -2.2 -1.5 ACP S-malonyltransferase compare
SGL_RS02785 -2.2 -7.0 CRR6 family NdhI maturation factor compare
SGL_RS04960 -2.2 -3.4 VOC family protein compare
SGL_RS16690 -2.2 -4.7 adenosine kinase compare
SGL_RS12585 -2.2 -1.5 ABC transporter permease subunit compare
SGL_RS16535 -2.2 -5.9 D-alanyl-D-alanine carboxypeptidase family protein compare
SGL_RS07560 -2.2 -6.5 thylakoid lumen protein compare
SGL_RS14245 -2.1 -13.0 TMEM165/GDT1 family protein compare
SGL_RS17405 -2.1 -7.4 L-2-hydroxyglutarate oxidase compare
SGL_RS03570 -2.1 -2.8 Uma2 family endonuclease compare
SGL_RS09395 -2.1 -1.4 aldo/keto reductase compare
SGL_RS14335 -2.1 -1.4 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS07130 -2.1 -12.8 AAA-like domain-containing protein compare
SGL_RS08175 -2.1 -1.4 serine hydrolase compare
SGL_RS06755 -2.0 -5.7 bacterioferritin-associated ferredoxin compare
SGL_RS12925 -2.0 -2.7 AAA family ATPase compare
SGL_RS05420 -2.0 -10.8 hypothetical protein compare
SGL_RS06640 -2.0 -2.0 DUF4168 domain-containing protein compare
SGL_RS17520 -2.0 -1.4 DUF3352 domain-containing protein compare
SGL_RS14105 -2.0 -1.4 2-succinylbenzoate--CoA ligase compare
SGL_RS10320 -2.0 -1.3 ribosome biogenesis GTPase Der compare
SGL_RS11285 -2.0 -4.4 response regulator transcription factor compare
SGL_RS14140 -1.9 -3.8 low-complexity tail membrane protein compare
SGL_RS13370 -1.9 -3.5 exonuclease SbcCD subunit D compare
SGL_RS15370 -1.9 -4.2 DnaJ C-terminal domain-containing protein compare
SGL_RS14920 -1.9 -2.1 cation:proton antiporter compare
SGL_RS16815 -1.9 -2.8 hypothetical protein compare
SGL_RS15305 -1.9 -5.3 ribonuclease HI compare
SGL_RS03465 -1.8 -5.9 allophycocyanin subunit alpha-B compare
SGL_RS13535 -1.8 -1.3 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS07300 -1.8 -5.8 site-2 protease family protein compare
SGL_RS16670 -1.8 -9.1 DUF5942 domain-containing protein compare
SGL_RS09810 -1.8 -1.7 photosystem I reaction center subunit III compare


Specific Phenotypes

For 29 genes in this experiment

For nitrogen source Sodium nitrite in Synechocystis sp000284455 PCC 6803

For nitrogen source Sodium nitrite across organisms