Experiment set2S541 for Synechocystis sp000284455 PCC 6803

Compare to:

Nickel (II) sulfate hexahydrate 5 uM

200 most important genes:

  gene name fitness t score description  
SGL_RS16065 -8.6 -23.5 CusA/CzcA family heavy metal efflux RND transporter compare
SGL_RS03000 -8.4 -5.5 spore maturation protein compare
SGL_RS03560 -8.2 -8.0 class I SAM-dependent methyltransferase compare
SGL_RS13175 -8.2 -5.4 GerMN domain-containing protein compare
SGL_RS03540 -8.0 -7.8 ABC transporter ATP-binding protein compare
SGL_RS12540 -7.8 -5.4 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS03520 -7.6 -5.3 ABC transporter permease compare
SGL_RS09820 -7.5 -4.1 ribosome maturation factor RimM compare
SGL_RS19585 -7.1 -2.3 hypothetical protein compare
SGL_RS10775 -7.0 -7.6 DUF3326 domain-containing protein compare
SGL_RS17330 -7.0 -4.8 biosynthetic arginine decarboxylase compare
SGL_RS03625 -7.0 -11.8 glycosyltransferase family 1 protein compare
SGL_RS12755 -6.9 -12.5 IMS domain-containing protein compare
SGL_RS04775 -6.9 -5.1 alpha/beta hydrolase compare
SGL_RS04510 -6.8 -5.9 DUF561 domain-containing protein compare
SGL_RS04390 -6.7 -3.5 DUF433 domain-containing protein compare
SGL_RS02460 -6.7 -4.6 phosphate signaling complex protein PhoU compare
SGL_RS17230 -6.7 -6.8 L-aspartate oxidase compare
SGL_RS14905 -6.5 -4.0 30S ribosomal protein PSRP-3 compare
SGL_RS16860 -6.4 -7.6 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS17405 -6.4 -8.3 L-2-hydroxyglutarate oxidase compare
SGL_RS06675 -6.4 -4.4 ABC transporter ATP-binding protein compare
SGL_RS15425 -6.3 -6.2 cobalamin biosynthesis protein CobW compare
SGL_RS11025 -6.3 -4.4 oxidoreductase compare
SGL_RS02145 -6.3 -10.6 metallophosphoesterase compare
SGL_RS13465 -6.2 -10.0 class II fumarate hydratase compare
SGL_RS15655 -6.1 -17.0 asparaginase compare
SGL_RS07285 -6.1 -11.8 N-acetylmuramoyl-L-alanine amidase compare
SGL_RS06130 -6.1 -4.2 anti-sigma regulatory factor compare
SGL_RS03545 -6.0 -4.0 glucose-1-phosphate cytidylyltransferase compare
SGL_RS16940 -6.0 -3.7 dephospho-CoA kinase compare
SGL_RS15045 -6.0 -4.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS02795 -6.0 -4.5 flavin prenyltransferase UbiX compare
SGL_RS03585 -5.9 -9.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS11760 -5.9 -9.7 radical SAM protein compare
SGL_RS12335 -5.9 -5.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS05880 -5.8 -4.0 sugar ABC transporter substrate-binding protein compare
SGL_RS03555 -5.8 -13.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS16055 -5.7 -14.7 two-component system response regulator RppA compare
SGL_RS13510 -5.7 -4.0 transglycosylase domain-containing protein compare
SGL_RS03550 -5.7 -7.2 CDP-glucose 4,6-dehydratase compare
SGL_RS06020 -5.6 -5.5 sugar ABC transporter permease compare
SGL_RS13870 -5.6 -3.9 rRNA maturation RNase YbeY compare
SGL_RS12870 -5.5 -4.9 YqeG family HAD IIIA-type phosphatase compare
SGL_RS17125 -5.5 -5.0 inositol monophosphatase family protein compare
SGL_RS12770 -5.5 -3.8 uroporphyrinogen-III C-methyltransferase compare
SGL_RS16670 -5.5 -13.3 DUF5942 domain-containing protein compare
SGL_RS14930 -5.5 -8.9 type I methionyl aminopeptidase compare
SGL_RS07200 -5.4 -3.8 LCP family protein compare
SGL_RS13910 -5.4 -2.5 phasin family protein compare
SGL_RS09295 -5.3 -15.5 alpha/beta hydrolase compare
SGL_RS09845 -5.1 -5.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS03085 -5.1 -3.0 DUF2862 domain-containing protein compare
SGL_RS11510 -5.1 -4.8 dihydroneopterin aldolase compare
SGL_RS18100 -5.1 -3.2 SH3 domain-containing protein compare
SGL_RS13555 -5.1 -3.3 aldehyde oxygenase (deformylating) compare
SGL_RS03590 -5.0 -7.5 ATP-grasp domain-containing protein compare
SGL_RS07840 -5.0 -3.4 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS08790 -5.0 -3.0 carbohydrate ABC transporter permease compare
SGL_RS11000 -5.0 -3.4 sulfate adenylyltransferase compare
SGL_RS06430 -5.0 -2.6 glycosyltransferase family 2 protein compare
SGL_RS15710 -4.9 -22.4 HD family phosphohydrolase compare
SGL_RS05980 -4.9 -3.4 hypothetical protein compare
SGL_RS02580 -4.9 -3.0 DUF1818 family protein compare
SGL_RS16050 -4.9 -22.2 two-component system sensor histidine kinase RppB compare
SGL_RS16545 -4.9 -11.2 LdpA C-terminal domain-containing domain compare
SGL_RS17650 -4.8 -3.3 hypothetical protein compare
SGL_RS16880 -4.8 -2.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS14320 -4.8 -10.7 site-2 protease family protein compare
SGL_RS12545 -4.8 -2.8 GTPase Era compare
SGL_RS10160 -4.7 -7.7 B12-binding domain-containing radical SAM protein compare
SGL_RS02305 -4.6 -11.7 NAD-dependent malic enzyme compare
SGL_RS07130 -4.6 -12.4 AAA-like domain-containing protein compare
SGL_RS15845 -4.6 -13.7 polyphosphate kinase 1 compare
SGL_RS02665 -4.5 -2.4 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS07565 -4.5 -6.3 hypothetical protein compare
SGL_RS12745 -4.5 -4.4 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS15700 -4.5 -7.5 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS14540 -4.5 -2.3 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS12030 -4.5 -6.8 extracellular solute-binding protein compare
SGL_RS03420 -4.5 -5.1 UbiD family decarboxylase compare
SGL_RS08095 -4.5 -11.3 peptide ABC transporter substrate-binding protein compare
SGL_RS12560 -4.4 -8.2 ABC transporter permease compare
SGL_RS17470 -4.4 -3.0 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS18270 -4.4 -5.5 family 10 glycosylhydrolase compare
SGL_RS03840 -4.4 -3.3 adenylyl-sulfate kinase compare
SGL_RS07935 -4.4 -3.6 hypothetical protein compare
SGL_RS12100 -4.4 -20.1 AAA-like domain-containing protein compare
SGL_RS02955 -4.4 -3.5 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS07170 -4.3 -2.2 glycine cleavage system protein GcvH compare
SGL_RS16075 -4.3 -17.0 MFS transporter compare
SGL_RS10155 -4.2 -2.9 hypothetical protein compare
SGL_RS03005 -4.2 -3.7 nucleoside recognition domain-containing protein compare
SGL_RS13195 -4.2 -5.6 Ig-like domain-containing protein compare
SGL_RS12575 -4.2 -2.9 riboflavin synthase compare
SGL_RS12970 -4.2 -7.7 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
SGL_RS11955 -4.2 -2.9 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS12490 -4.2 -6.9 glutamate--cysteine ligase compare
SGL_RS11305 -4.1 -5.9 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS08275 -4.1 -2.8 tetratricopeptide repeat protein compare
SGL_RS06750 -4.1 -10.1 DUF192 domain-containing protein compare
SGL_RS16060 -4.1 -8.0 efflux RND transporter periplasmic adaptor subunit compare
SGL_RS09905 -4.0 -2.8 biotin/lipoate A/B protein ligase family protein compare
SGL_RS13055 -4.0 -2.7 protein translocase subunit SecF compare
SGL_RS08710 -3.9 -2.7 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS05440 -3.9 -2.6 ACP S-malonyltransferase compare
SGL_RS05560 -3.8 -4.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS07570 -3.8 -5.4 ABC transporter permease compare
SGL_RS17340 -3.7 -1.5 quinolinate synthase NadA compare
SGL_RS06485 -3.7 -2.8 anti-sigma factor compare
SGL_RS14335 -3.7 -2.5 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS08175 -3.6 -2.5 serine hydrolase compare
SGL_RS14860 -3.6 -4.3 8-amino-7-oxononanoate synthase compare
SGL_RS03450 -3.6 -4.7 permease compare
SGL_RS18320 -3.6 -13.3 serine/threonine-protein kinase compare
SGL_RS05470 -3.6 -4.2 dihydropteroate synthase compare
SGL_RS17305 -3.5 -4.7 pyrroline-5-carboxylate reductase compare
SGL_RS17520 -3.5 -4.2 DUF3352 domain-containing protein compare
SGL_RS18095 -3.5 -7.8 TIGR03943 family protein compare
SGL_RS05320 -3.5 -12.8 PBP1A family penicillin-binding protein compare
SGL_RS13535 -3.5 -2.4 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS10585 -3.5 -15.7 MFS transporter compare
SGL_RS11135 -3.5 -1.5 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS03425 -3.5 -2.4 precorrin-3B C(17)-methyltransferase compare
SGL_RS15560 -3.4 -2.4 dethiobiotin synthase compare
SGL_RS09395 -3.4 -3.3 aldo/keto reductase compare
SGL_RS13495 -3.4 -9.5 AarF/ABC1/UbiB kinase family protein compare
SGL_RS03185 -3.4 -2.3 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS15835 -3.4 -12.4 TrmJ/YjtD family RNA methyltransferase compare
SGL_RS12000 -3.3 -17.1 type II CAAX endopeptidase family protein compare
SGL_RS15620 -3.3 -2.2 cobyric acid synthase CobQ compare
SGL_RS04665 -3.3 -9.0 hypothetical protein compare
SGL_RS04650 -3.3 -13.9 tetratricopeptide repeat protein compare
SGL_RS11325 -3.3 -7.2 pitrilysin family protein compare
SGL_RS13550 -3.2 -3.1 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS15130 -3.2 -13.3 dTDP-glucose 4,6-dehydratase compare
SGL_RS17110 -3.1 -5.7 hypothetical protein compare
SGL_RS18300 -3.1 -5.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS00830 -3.1 -4.2 hypothetical protein compare
SGL_RS02280 -3.1 -9.9 Rne/Rng family ribonuclease compare
SGL_RS16665 -3.1 -14.4 transglycosylase SLT domain-containing protein compare
SGL_RS09720 -3.1 -2.1 beta-ketoacyl-ACP synthase compare
SGL_RS14105 -3.0 -4.1 2-succinylbenzoate--CoA ligase compare
SGL_RS08495 -3.0 -8.2 DUF3370 domain-containing protein compare
SGL_RS13685 -2.9 -8.3 ABC transporter ATP-binding protein compare
SGL_RS03250 -2.9 -5.0 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS18180 -2.9 -6.6 ABC transporter permease compare
SGL_RS02375 -2.9 -9.8 DUF3086 domain-containing protein compare
SGL_RS09385 -2.9 -2.7 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS05330 -2.9 -14.7 ABC transporter ATP-binding protein compare
SGL_RS12400 -2.9 -2.0 lysophospholipid acyltransferase family protein compare
SGL_RS11605 -2.8 -8.4 glycosyltransferase compare
SGL_RS04615 -2.7 -12.6 Fur family transcriptional regulator compare
SGL_RS15370 -2.7 -5.7 DnaJ C-terminal domain-containing protein compare
SGL_RS10480 -2.7 -12.9 metallophosphoesterase family protein compare
SGL_RS12910 -2.7 -6.8 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS04260 -2.7 -10.0 DUF2993 domain-containing protein compare
SGL_RS14190 -2.7 -8.3 phosphate ABC transporter permease PstA compare
SGL_RS12585 -2.7 -4.6 ABC transporter permease subunit compare
SGL_RS00825 -2.6 -7.1 hypothetical protein compare
SGL_RS04230 -2.6 -5.1 exonuclease subunit SbcC compare
SGL_RS15840 -2.6 -9.8 class A beta-lactamase compare
SGL_RS02785 -2.6 -8.1 CRR6 family NdhI maturation factor compare
SGL_RS14180 -2.6 -11.8 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS04820 -2.6 -2.8 LysR family transcriptional regulator compare
SGL_RS11395 -2.5 -9.5 TlyA family RNA methyltransferase compare
SGL_RS14185 -2.5 -5.7 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS10890 -2.5 -10.4 LD-carboxypeptidase compare
SGL_RS04085 -2.5 -3.3 YlqD family protein compare
SGL_RS14445 -2.5 -4.1 hypothetical protein compare
SGL_RS03790 -2.5 -3.3 GTPase ObgE compare
SGL_RS14025 -2.5 -9.9 gamma-glutamyl-phosphate reductase compare
SGL_RS19605 -2.5 -3.7 hypothetical protein compare
SGL_RS03365 -2.4 -3.1 Ycf66 family protein compare
SGL_RS04720 -2.4 -2.8 iron uptake porin compare
SGL_RS03895 -2.4 -6.0 MBL fold metallo-hydrolase compare
SGL_RS16360 -2.4 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS10790 -2.4 -4.7 DUF4359 domain-containing protein compare
SGL_RS11035 -2.3 -2.3 LapA family protein compare
SGL_RS18325 -2.3 -9.1 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS03970 -2.3 -3.0 thiamine phosphate synthase compare
SGL_RS11610 -2.3 -7.3 class I SAM-dependent methyltransferase compare
SGL_RS17685 -2.3 -6.5 ArsB/NhaD family transporter compare
SGL_RS13115 -2.3 -6.1 DUF4126 domain-containing protein compare
SGL_RS16770 -2.2 -4.8 LptF/LptG family permease compare
SGL_RS10320 -2.2 -2.6 ribosome biogenesis GTPase Der compare
SGL_RS18365 -2.2 -8.7 glycosyltransferase family 9 protein compare
SGL_RS14560 -2.2 -6.4 hypothetical protein compare
SGL_RS06340 -2.2 -6.3 response regulator transcription factor compare
SGL_RS07545 -2.2 -5.4 serine/threonine-protein phosphatase compare
SGL_RS14425 -2.2 -3.0 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS03275 -2.2 -9.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS03675 -2.2 -2.6 hypothetical protein compare
SGL_RS03505 -2.2 -11.1 exopolysaccharide transport family protein compare
SGL_RS02840 -2.1 -4.2 MBL fold metallo-hydrolase compare
SGL_RS05465 -2.1 -2.2 hypothetical protein compare
SGL_RS14565 -2.1 -11.3 SpoIID/LytB domain-containing protein compare
SGL_RS03850 -2.1 -5.7 biopolymer transporter ExbD compare
SGL_RS03640 -2.1 -6.6 UDP-glucose 4-epimerase GalE compare
SGL_RS16690 -2.1 -3.2 adenosine kinase compare


Specific Phenotypes

For 4 genes in this experiment

For stress Nickel (II) sulfate hexahydrate in Synechocystis sp000284455 PCC 6803

For stress Nickel (II) sulfate hexahydrate across organisms