Experiment set2S540 for Synechocystis sp000284455 PCC 6803

Compare to:

Nickel (II) sulfate hexahydrate 3 uM

200 most important genes:

  gene name fitness t score description  
SGL_RS03625 -10.8 -5.3 glycosyltransferase family 1 protein compare
SGL_RS03590 -10.5 -6.9 ATP-grasp domain-containing protein compare
SGL_RS16055 -10.5 -7.2 two-component system response regulator RppA compare
SGL_RS03550 -10.0 -9.7 CDP-glucose 4,6-dehydratase compare
SGL_RS03585 -10.0 -6.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS03555 -9.8 -9.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS16065 -9.7 -14.8 CusA/CzcA family heavy metal efflux RND transporter compare
SGL_RS07130 -9.4 -12.9 AAA-like domain-containing protein compare
SGL_RS16050 -9.3 -15.6 two-component system sensor histidine kinase RppB compare
SGL_RS03560 -9.1 -6.3 class I SAM-dependent methyltransferase compare
SGL_RS15710 -8.9 -18.2 HD family phosphohydrolase compare
SGL_RS03540 -8.8 -6.1 ABC transporter ATP-binding protein compare
SGL_RS11760 -8.7 -6.0 radical SAM protein compare
SGL_RS12100 -8.7 -15.6 AAA-like domain-containing protein compare
SGL_RS03000 -8.7 -5.5 spore maturation protein compare
SGL_RS04775 -8.6 -5.0 alpha/beta hydrolase compare
SGL_RS13175 -8.5 -5.3 GerMN domain-containing protein compare
SGL_RS02795 -8.4 -5.8 flavin prenyltransferase UbiX compare
SGL_RS12755 -8.4 -5.8 IMS domain-containing protein compare
SGL_RS03520 -7.9 -5.3 ABC transporter permease compare
SGL_RS17405 -7.9 -5.4 L-2-hydroxyglutarate oxidase compare
SGL_RS02955 -7.9 -4.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS09820 -7.9 -4.1 ribosome maturation factor RimM compare
SGL_RS13495 -7.9 -7.7 AarF/ABC1/UbiB kinase family protein compare
SGL_RS13465 -7.8 -11.9 class II fumarate hydratase compare
SGL_RS07935 -7.7 -4.0 hypothetical protein compare
SGL_RS16860 -7.5 -5.2 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS02145 -7.5 -5.2 metallophosphoesterase compare
SGL_RS03545 -7.5 -5.7 glucose-1-phosphate cytidylyltransferase compare
SGL_RS09295 -7.5 -17.4 alpha/beta hydrolase compare
SGL_RS16060 -7.4 -11.1 efflux RND transporter periplasmic adaptor subunit compare
SGL_RS16670 -7.4 -12.5 DUF5942 domain-containing protein compare
SGL_RS12560 -7.4 -10.2 ABC transporter permease compare
SGL_RS02375 -7.4 -10.1 DUF3086 domain-containing protein compare
SGL_RS19585 -7.4 -2.2 hypothetical protein compare
SGL_RS17330 -7.3 -5.1 biosynthetic arginine decarboxylase compare
SGL_RS13910 -7.3 -4.6 phasin family protein compare
SGL_RS12870 -7.3 -4.9 YqeG family HAD IIIA-type phosphatase compare
SGL_RS17125 -7.3 -4.9 inositol monophosphatase family protein compare
SGL_RS04510 -7.1 -6.0 DUF561 domain-containing protein compare
SGL_RS18270 -7.1 -4.6 family 10 glycosylhydrolase compare
SGL_RS18180 -7.1 -6.0 ABC transporter permease compare
SGL_RS04390 -7.1 -3.5 DUF433 domain-containing protein compare
SGL_RS15425 -7.1 -4.9 cobalamin biosynthesis protein CobW compare
SGL_RS02460 -7.0 -4.7 phosphate signaling complex protein PhoU compare
SGL_RS12540 -7.0 -6.1 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS14930 -6.9 -7.6 type I methionyl aminopeptidase compare
SGL_RS14905 -6.8 -4.0 30S ribosomal protein PSRP-3 compare
SGL_RS10130 -6.7 -15.3 fatty acid desaturase compare
SGL_RS06675 -6.7 -4.6 ABC transporter ATP-binding protein compare
SGL_RS11025 -6.7 -4.6 oxidoreductase compare
SGL_RS07565 -6.7 -8.1 hypothetical protein compare
SGL_RS13685 -6.6 -9.5 ABC transporter ATP-binding protein compare
SGL_RS03005 -6.6 -2.8 nucleoside recognition domain-containing protein compare
SGL_RS10305 -6.5 -7.8 PIN/TRAM domain-containing protein compare
SGL_RS07570 -6.5 -9.3 ABC transporter permease compare
SGL_RS16075 -6.5 -16.8 MFS transporter compare
SGL_RS15840 -6.4 -12.4 class A beta-lactamase compare
SGL_RS12910 -6.4 -5.1 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS06130 -6.4 -4.4 anti-sigma regulatory factor compare
SGL_RS14190 -6.3 -7.2 phosphate ABC transporter permease PstA compare
SGL_RS16940 -6.3 -3.8 dephospho-CoA kinase compare
SGL_RS06020 -6.3 -4.4 sugar ABC transporter permease compare
SGL_RS16545 -6.3 -14.7 LdpA C-terminal domain-containing domain compare
SGL_RS04260 -6.3 -12.3 DUF2993 domain-containing protein compare
SGL_RS11510 -6.2 -4.1 dihydroneopterin aldolase compare
SGL_RS05880 -6.1 -4.2 sugar ABC transporter substrate-binding protein compare
SGL_RS03420 -6.1 -8.1 UbiD family decarboxylase compare
SGL_RS15655 -6.1 -14.9 asparaginase compare
SGL_RS13510 -6.0 -4.2 transglycosylase domain-containing protein compare
SGL_RS10160 -6.0 -5.9 B12-binding domain-containing radical SAM protein compare
SGL_RS04650 -6.0 -13.0 tetratricopeptide repeat protein compare
SGL_RS13870 -5.9 -4.1 rRNA maturation RNase YbeY compare
SGL_RS14320 -5.9 -13.1 site-2 protease family protein compare
SGL_RS18100 -5.9 -2.5 SH3 domain-containing protein compare
SGL_RS12770 -5.9 -4.0 uroporphyrinogen-III C-methyltransferase compare
SGL_RS08095 -5.9 -14.2 peptide ABC transporter substrate-binding protein compare
SGL_RS13195 -5.8 -5.7 Ig-like domain-containing protein compare
SGL_RS13900 -5.8 -13.8 AI-2E family transporter compare
SGL_RS07200 -5.8 -4.0 LCP family protein compare
SGL_RS17110 -5.7 -10.9 hypothetical protein compare
SGL_RS15700 -5.7 -11.6 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS05330 -5.7 -13.4 ABC transporter ATP-binding protein compare
SGL_RS05210 -5.6 -8.4 SLBB domain-containing protein compare
SGL_RS12490 -5.6 -5.4 glutamate--cysteine ligase compare
SGL_RS12970 -5.6 -8.8 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
SGL_RS13115 -5.6 -8.3 DUF4126 domain-containing protein compare
SGL_RS03840 -5.5 -3.3 adenylyl-sulfate kinase compare
SGL_RS09845 -5.5 -5.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS08155 -5.4 -2.8 Spy/CpxP family protein refolding chaperone compare
SGL_RS15045 -5.4 -8.3 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS15845 -5.4 -13.4 polyphosphate kinase 1 compare
SGL_RS07840 -5.3 -3.5 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS07285 -5.3 -11.2 N-acetylmuramoyl-L-alanine amidase compare
SGL_RS03085 -5.3 -3.0 DUF2862 domain-containing protein compare
SGL_RS08790 -5.3 -3.1 carbohydrate ABC transporter permease compare
SGL_RS11000 -5.3 -3.7 sulfate adenylyltransferase compare
SGL_RS12745 -5.3 -3.6 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS06430 -5.3 -2.7 glycosyltransferase family 2 protein compare
SGL_RS13285 -5.3 -9.5 Sll0314/Alr1548 family TPR repeat-containing protein compare
SGL_RS04615 -5.3 -8.6 Fur family transcriptional regulator compare
SGL_RS05980 -5.2 -3.6 hypothetical protein compare
SGL_RS16880 -5.2 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS03250 -5.2 -5.6 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS17650 -5.2 -3.4 hypothetical protein compare
SGL_RS14920 -5.1 -3.5 cation:proton antiporter compare
SGL_RS12545 -5.1 -2.9 GTPase Era compare
SGL_RS05320 -5.1 -14.4 PBP1A family penicillin-binding protein compare
SGL_RS10585 -5.1 -14.0 MFS transporter compare
SGL_RS11395 -5.0 -14.5 TlyA family RNA methyltransferase compare
SGL_RS03505 -4.9 -16.6 exopolysaccharide transport family protein compare
SGL_RS07930 -4.9 -10.0 hypothetical protein compare
SGL_RS13905 -4.9 -6.5 hypothetical protein compare
SGL_RS08650 -4.9 -8.7 S-layer homology domain-containing protein compare
SGL_RS02665 -4.9 -2.5 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS14185 -4.8 -6.7 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS06340 -4.8 -9.6 response regulator transcription factor compare
SGL_RS14540 -4.8 -2.4 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS17410 -4.8 -6.4 tRNA-Val compare
SGL_RS02280 -4.8 -8.5 Rne/Rng family ribonuclease compare
SGL_RS14025 -4.8 -11.0 gamma-glutamyl-phosphate reductase compare
SGL_RS07180 -4.8 -6.5 carboxynorspermidine decarboxylase compare
SGL_RS08495 -4.7 -13.9 DUF3370 domain-containing protein compare
SGL_RS10775 -4.7 -5.4 DUF3326 domain-containing protein compare
SGL_RS17305 -4.7 -3.2 pyrroline-5-carboxylate reductase compare
SGL_RS18115 -4.7 -2.4 DUF3727 domain-containing protein compare
SGL_RS18095 -4.7 -8.0 TIGR03943 family protein compare
SGL_RS07170 -4.7 -2.2 glycine cleavage system protein GcvH compare
SGL_RS03365 -4.7 -3.5 Ycf66 family protein compare
SGL_RS06750 -4.6 -11.4 DUF192 domain-containing protein compare
SGL_RS14860 -4.5 -3.1 8-amino-7-oxononanoate synthase compare
SGL_RS12575 -4.5 -3.1 riboflavin synthase compare
SGL_RS11955 -4.5 -3.1 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS18170 -4.5 -3.4 PspA/IM30 family protein compare
SGL_RS08275 -4.4 -3.1 tetratricopeptide repeat protein compare
SGL_RS17470 -4.4 -4.3 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS10480 -4.4 -10.2 metallophosphoesterase family protein compare
SGL_RS11305 -4.4 -7.3 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS14300 -4.4 -20.6 HAMP domain-containing sensor histidine kinase compare
SGL_RS11590 -4.4 -6.8 hypothetical protein compare
SGL_RS09905 -4.4 -3.0 biotin/lipoate A/B protein ligase family protein compare
SGL_RS03275 -4.4 -15.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS13370 -4.4 -2.9 exonuclease SbcCD subunit D compare
SGL_RS14180 -4.4 -16.8 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS05470 -4.4 -3.0 dihydropteroate synthase compare
SGL_RS09305 -4.4 -7.3 adenosyl-hopene transferase HpnH compare
SGL_RS18300 -4.4 -4.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS04085 -4.4 -3.4 YlqD family protein compare
SGL_RS10155 -4.3 -4.2 hypothetical protein compare
SGL_RS03090 -4.3 -15.8 ArsA family ATPase compare
SGL_RS04665 -4.3 -7.8 hypothetical protein compare
SGL_RS14195 -4.3 -6.7 phosphate ABC transporter permease subunit PstC compare
SGL_RS08710 -4.3 -2.9 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS12585 -4.2 -2.9 ABC transporter permease subunit compare
SGL_RS05440 -4.2 -2.9 ACP S-malonyltransferase compare
SGL_RS01905 -4.2 -10.4 GDP-mannose 4,6-dehydratase compare
SGL_RS17520 -4.1 -2.8 DUF3352 domain-containing protein compare
SGL_RS15435 -4.1 -10.8 PD40 domain-containing protein compare
SGL_RS09395 -4.1 -2.8 aldo/keto reductase compare
SGL_RS14430 -4.1 -7.7 cobalt ECF transporter T component CbiQ compare
SGL_RS02580 -4.1 -3.8 DUF1818 family protein compare
SGL_RS14335 -4.0 -2.8 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS06485 -4.0 -2.9 anti-sigma factor compare
SGL_RS08175 -4.0 -2.7 serine hydrolase compare
SGL_RS14105 -4.0 -2.7 2-succinylbenzoate--CoA ligase compare
SGL_RS11325 -3.9 -5.4 pitrilysin family protein compare
SGL_RS10320 -3.9 -2.7 ribosome biogenesis GTPase Der compare
SGL_RS03430 -3.9 -5.9 DUF4335 domain-containing protein compare
SGL_RS15790 -3.8 -11.6 hypothetical protein compare
SGL_RS03670 -3.8 -8.9 glycosyltransferase compare
SGL_RS13535 -3.8 -2.6 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS15560 -3.8 -2.6 dethiobiotin synthase compare
SGL_RS03425 -3.8 -2.6 precorrin-3B C(17)-methyltransferase compare
SGL_RS18230 -3.8 -6.8 DUF2993 domain-containing protein compare
SGL_RS10360 -3.8 -5.0 hypothetical protein compare
SGL_RS03675 -3.8 -4.7 hypothetical protein compare
SGL_RS05560 -3.7 -5.1 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS11135 -3.7 -1.5 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS12000 -3.7 -13.1 type II CAAX endopeptidase family protein compare
SGL_RS03185 -3.7 -2.5 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS16770 -3.7 -5.7 LptF/LptG family permease compare
SGL_RS06440 -3.7 -4.2 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS03640 -3.7 -12.4 UDP-glucose 4-epimerase GalE compare
SGL_RS09385 -3.7 -2.5 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS03790 -3.7 -2.5 GTPase ObgE compare
SGL_RS10890 -3.6 -14.3 LD-carboxypeptidase compare
SGL_RS15620 -3.6 -2.5 cobyric acid synthase CobQ compare
SGL_RS16950 -3.6 -9.7 phosphoketolase compare
SGL_RS06700 -3.6 -12.0 peptide chain release factor 3 compare
SGL_RS04230 -3.6 -4.0 exonuclease subunit SbcC compare
SGL_RS05260 -3.6 -8.3 hypothetical protein compare
SGL_RS18325 -3.5 -9.8 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS00825 -3.5 -7.4 hypothetical protein compare
SGL_RS03265 -3.4 -2.3 photosystem II complex extrinsic protein PsbU compare
SGL_RS07580 -3.4 -10.6 exopolysaccharide biosynthesis protein compare
SGL_RS08115 -3.4 -8.6 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS02305 -3.4 -8.7 NAD-dependent malic enzyme compare
SGL_RS03970 -3.4 -2.3 thiamine phosphate synthase compare
SGL_RS09720 -3.4 -2.3 beta-ketoacyl-ACP synthase compare
SGL_RS15535 -3.4 -10.1 EamA family transporter compare


Specific Phenotypes

For 12 genes in this experiment

For stress Nickel (II) sulfate hexahydrate in Synechocystis sp000284455 PCC 6803

For stress Nickel (II) sulfate hexahydrate across organisms