Experiment set2S534 for Synechocystis sp000284455 PCC 6803

Compare to:

Ethanol 2 vol%

200 most important genes:

  gene name fitness t score description  
SGL_RS17625 -6.0 -10.6 EAL domain-containing protein compare
SGL_RS12235 -5.4 -5.3 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS09385 -4.8 -3.3 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS16100 -4.6 -13.6 heavy metal translocating P-type ATPase compare
SGL_RS05435 -4.6 -4.5 heavy metal translocating P-type ATPase compare
SGL_RS14105 -4.4 -5.1 2-succinylbenzoate--CoA ligase compare
SGL_RS05560 -4.2 -6.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS14335 -4.2 -4.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS06595 -4.1 -8.5 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS12030 -4.1 -10.1 extracellular solute-binding protein compare
SGL_RS02810 -4.1 -19.7 EAL domain-containing protein compare
SGL_RS02220 -3.9 -5.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS00320 -3.9 -5.8 helix-turn-helix transcriptional regulator compare
SGL_RS16880 -3.9 -3.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS03420 -3.9 -8.8 UbiD family decarboxylase compare
SGL_RS06590 -3.8 -8.1 nitrate ABC transporter permease compare
SGL_RS02795 -3.8 -8.7 flavin prenyltransferase UbiX compare
SGL_RS15530 -3.8 -5.3 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS07305 -3.8 -9.6 N-acetylmuramic acid 6-phosphate etherase compare
SGL_RS12770 -3.7 -4.6 uroporphyrinogen-III C-methyltransferase compare
SGL_RS06585 -3.7 -6.6 nitrate ABC transporter ATP-binding protein compare
SGL_RS08275 -3.7 -5.4 tetratricopeptide repeat protein compare
SGL_RS10320 -3.7 -4.8 ribosome biogenesis GTPase Der compare
SGL_RS03085 -3.6 -8.6 DUF2862 domain-containing protein compare
SGL_RS16915 -3.6 -7.5 trigger factor compare
SGL_RS14425 -3.6 -5.7 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS04720 -3.6 -4.8 iron uptake porin compare
SGL_RS04340 -3.4 -13.9 type I glutamate--ammonia ligase compare
SGL_RS13490 -3.4 -12.2 aspartate aminotransferase compare
SGL_RS16735 -3.3 -4.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS16360 -3.3 -6.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS17650 -3.3 -4.1 hypothetical protein compare
SGL_RS03790 -3.3 -4.9 GTPase ObgE compare
SGL_RS07840 -3.3 -4.6 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS12335 -3.2 -11.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS02805 -3.2 -12.6 universal stress protein compare
SGL_RS09720 -3.1 -6.2 beta-ketoacyl-ACP synthase compare
SGL_RS14430 -3.1 -6.8 cobalt ECF transporter T component CbiQ compare
SGL_RS08175 -3.1 -5.7 serine hydrolase compare
SGL_RS13585 -3.1 -14.3 PAS domain S-box protein compare
SGL_RS08595 -3.1 -6.4 50S ribosomal protein L11 methyltransferase compare
SGL_RS18300 -3.1 -6.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS11985 -3.0 -2.6 LysR family transcriptional regulator compare
SGL_RS12925 -2.9 -7.6 AAA family ATPase compare
SGL_RS13055 -2.9 -4.1 protein translocase subunit SecF compare
SGL_RS02375 -2.9 -11.0 DUF3086 domain-containing protein compare
SGL_RS03970 -2.9 -4.9 thiamine phosphate synthase compare
SGL_RS15560 -2.8 -4.1 dethiobiotin synthase compare
SGL_RS12585 -2.8 -6.0 ABC transporter permease subunit compare
SGL_RS04390 -2.8 -5.7 DUF433 domain-containing protein compare
SGL_RS14860 -2.8 -4.9 8-amino-7-oxononanoate synthase compare
SGL_RS02095 -2.8 -10.0 dTDP-4-dehydrorhamnose reductase compare
SGL_RS08535 -2.7 -3.6 NIL domain-containing protein compare
SGL_RS17520 -2.7 -6.9 DUF3352 domain-containing protein compare
SGL_RS07180 -2.7 -8.5 carboxynorspermidine decarboxylase compare
SGL_RS08765 -2.6 -3.6 2-phosphosulfolactate phosphatase family protein compare
SGL_RS04230 -2.6 -5.4 exonuclease subunit SbcC compare
SGL_RS09160 -2.6 -3.9 thioredoxin family protein compare
SGL_RS10490 -2.6 -8.5 precorrin-8X methylmutase compare
SGL_RS12490 -2.6 -6.4 glutamate--cysteine ligase compare
SGL_RS15130 -2.6 -14.1 dTDP-glucose 4,6-dehydratase compare
SGL_RS03265 -2.6 -3.3 photosystem II complex extrinsic protein PsbU compare
SGL_RS09305 -2.6 -7.6 adenosyl-hopene transferase HpnH compare
SGL_RS10155 -2.6 -5.2 hypothetical protein compare
SGL_RS17495 -2.6 -9.4 peptidoglycan editing factor PgeF compare
SGL_RS14435 -2.5 -2.6 cobalt transporter CbiM compare
SGL_RS03950 -2.5 -8.7 homocysteine biosynthesis protein compare
SGL_RS02260 -2.5 -3.8 HEAT repeat domain-containing protein compare
SGL_RS06600 -2.5 -11.2 anthranilate phosphoribosyltransferase family protein compare
SGL_RS14445 -2.4 -5.8 hypothetical protein compare
SGL_RS12920 -2.4 -3.0 hypothetical protein compare
SGL_RS07200 -2.4 -6.8 LCP family protein compare
SGL_RS11025 -2.4 -10.0 oxidoreductase compare
SGL_RS05440 -2.4 -2.8 ACP S-malonyltransferase compare
SGL_RS12575 -2.3 -3.9 riboflavin synthase compare
SGL_RS04195 -2.3 -9.3 response regulator compare
SGL_RS18085 -2.3 -16.2 molecular chaperone HtpG compare
SGL_RS05480 -2.3 -7.2 FAD-dependent oxidoreductase compare
SGL_RS11235 -2.3 -15.9 hybrid sensor histidine kinase/response regulator compare
SGL_RS07650 -2.2 -9.8 aminoglycoside phosphotransferase family protein compare
SGL_RS03425 -2.2 -3.8 precorrin-3B C(17)-methyltransferase compare
SGL_RS11510 -2.2 -3.3 dihydroneopterin aldolase compare
SGL_RS08710 -2.2 -5.6 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS13510 -2.2 -8.3 transglycosylase domain-containing protein compare
SGL_RS13370 -2.1 -4.3 exonuclease SbcCD subunit D compare
SGL_RS05465 -2.1 -4.5 hypothetical protein compare
SGL_RS11000 -2.1 -6.1 sulfate adenylyltransferase compare
SGL_RS03840 -2.1 -3.0 adenylyl-sulfate kinase compare
SGL_RS03365 -2.0 -3.5 Ycf66 family protein compare
SGL_RS04490 -2.0 -2.1 2TM domain-containing protein compare
SGL_RS15295 -2.0 -16.9 GspE/PulE family protein compare
SGL_RS03870 -2.0 -13.9 histidinol dehydrogenase compare
SGL_RS17125 -1.9 -3.6 inositol monophosphatase family protein compare
SGL_RS04735 -1.9 -3.2 hypothetical protein compare
SGL_RS11135 -1.9 -2.7 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS06675 -1.9 -6.3 ABC transporter ATP-binding protein compare
SGL_RS05470 -1.9 -4.3 dihydropteroate synthase compare
SGL_RS15545 -1.9 -12.8 FAD-dependent oxidoreductase compare
SGL_RS05235 -1.9 -5.3 phycobilisome linker polypeptide compare
SGL_RS03775 -1.9 -5.4 membrane protein compare
SGL_RS08790 -1.8 -4.3 carbohydrate ABC transporter permease compare
SGL_RS06430 -1.8 -2.4 glycosyltransferase family 2 protein compare
SGL_RS17270 -1.8 -3.3 hypothetical protein compare
SGL_RS14510 -1.8 -4.7 DUF3177 family protein compare
SGL_RS08650 -1.8 -5.7 S-layer homology domain-containing protein compare
SGL_RS14780 -1.8 -6.5 cyanase compare
SGL_RS03060 -1.8 -5.2 phosphoadenosine phosphosulfate reductase compare
SGL_RS07310 -1.8 -4.8 DUF3110 domain-containing protein compare
SGL_RS06755 -1.8 -5.9 bacterioferritin-associated ferredoxin compare
SGL_RS17470 -1.8 -5.9 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS17330 -1.7 -8.6 biosynthetic arginine decarboxylase compare
SGL_RS18270 -1.7 -4.1 family 10 glycosylhydrolase compare
SGL_RS05880 -1.7 -4.6 sugar ABC transporter substrate-binding protein compare
SGL_RS12660 -1.7 -9.3 DNA double-strand break repair nuclease NurA compare
SGL_RS08080 -1.7 -5.9 Fur family transcriptional regulator compare
SGL_RS06110 -1.7 -4.7 glycosyltransferase family 4 protein compare
SGL_RS13535 -1.7 -3.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS13495 -1.7 -7.3 AarF/ABC1/UbiB kinase family protein compare
SGL_RS15835 -1.7 -11.1 TrmJ/YjtD family RNA methyltransferase compare
SGL_RS08605 -1.7 -4.6 DUF3120 domain-containing protein compare
SGL_RS11305 -1.7 -3.9 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS09700 -1.6 -13.4 response regulator compare
SGL_RS09970 -1.6 -2.8 DUF29 domain-containing protein compare
SGL_RS07870 -1.6 -2.6 Ycf51 family protein compare
SGL_RS06020 -1.6 -6.1 sugar ABC transporter permease compare
SGL_RS11205 -1.6 -4.5 FHA domain-containing protein compare
SGL_RS03090 -1.6 -8.6 ArsA family ATPase compare
SGL_RS02740 -1.6 -8.8 HAS-barrel domain-containing protein compare
SGL_RS08495 -1.6 -7.7 DUF3370 domain-containing protein compare
SGL_RS15925 -1.6 -10.2 ATP-binding protein compare
SGL_RS06780 -1.6 -5.5 hypothetical protein compare
SGL_RS18055 -1.6 -9.4 HAD family hydrolase compare
SGL_RS02665 -1.6 -1.6 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS04345 -1.5 -13.1 response regulator compare
SGL_RS14045 -1.5 -4.1 hypothetical protein compare
SGL_RS14575 -1.5 -2.2 RNA-binding protein compare
SGL_RS05135 -1.5 -10.9 GAF domain-containing protein compare
SGL_RS14030 -1.5 -9.8 ATP-binding protein compare
SGL_RS13560 -1.5 -10.8 glucose-1-phosphate thymidylyltransferase compare
SGL_RS05240 -1.5 -3.7 phycobilisome linker polypeptide compare
SGL_RS13870 -1.5 -4.8 rRNA maturation RNase YbeY compare
SGL_RS15410 -1.5 -5.9 circadian clock KaiB family protein compare
SGL_RS09890 -1.4 -6.1 DUF3007 family protein compare
SGL_RS00195 -1.4 -8.1 glycosyltransferase family 2 protein compare
SGL_RS14025 -1.4 -8.7 gamma-glutamyl-phosphate reductase compare
SGL_RS12025 -1.4 -9.0 NAD(+) kinase compare
SGL_RS12930 -1.4 -2.0 DUF1257 domain-containing protein compare
SGL_RS02475 -1.4 -1.9 YlxR family protein compare
SGL_RS15370 -1.4 -5.3 DnaJ C-terminal domain-containing protein compare
SGL_RS18170 -1.4 -3.9 PspA/IM30 family protein compare
SGL_RS11325 -1.4 -5.4 pitrilysin family protein compare
SGL_RS06775 -1.4 -3.1 type II toxin-antitoxin system PemK/MazF family toxin compare
SGL_RS13170 -1.4 -5.1 histidine kinase compare
SGL_RS11035 -1.4 -2.6 LapA family protein compare
SGL_RS19585 -1.4 -3.6 hypothetical protein compare
SGL_RS02550 -1.4 -7.1 agmatinase compare
SGL_RS17065 -1.4 -5.5 bacterioferritin compare
SGL_RS08965 -1.4 -11.4 chlorophyll a/b binding light-harvesting protein compare
SGL_RS15305 -1.4 -6.7 ribonuclease HI compare
SGL_RS04525 -1.3 -3.6 photosynthesis system II assembly factor Ycf48 compare
SGL_RS07565 -1.3 -4.2 hypothetical protein compare
SGL_RS06355 -1.3 -1.4 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS15845 -1.3 -8.4 polyphosphate kinase 1 compare
SGL_RS00245 -1.3 -9.1 glycosyltransferase compare
SGL_RS02515 -1.3 -7.7 M56 family metallopeptidase compare
SGL_RS09715 -1.3 -6.9 pitrilysin family protein compare
SGL_RS09350 -1.3 -2.4 photosystem II biogenesis protein Psp29 compare
SGL_RS09695 -1.3 -4.6 hybrid sensor histidine kinase/response regulator compare
SGL_RS06665 -1.3 -4.8 bifunctional nuclease family protein compare
SGL_RS00825 -1.3 -5.5 hypothetical protein compare
SGL_RS14865 -1.2 -2.3 type I methionyl aminopeptidase compare
SGL_RS12000 -1.2 -8.7 type II CAAX endopeptidase family protein compare
SGL_RS03065 -1.2 -4.0 heat-inducible transcriptional repressor HrcA compare
SGL_RS17305 -1.2 -3.3 pyrroline-5-carboxylate reductase compare
SGL_RS13910 -1.2 -3.3 phasin family protein compare
SGL_RS15425 -1.2 -4.8 cobalamin biosynthesis protein CobW compare
SGL_RS04085 -1.2 -1.8 YlqD family protein compare
SGL_RS03185 -1.2 -2.5 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS05980 -1.2 -2.9 hypothetical protein compare
SGL_RS07605 -1.2 -3.0 HEAT repeat domain-containing protein compare
SGL_RS10295 -1.2 -4.8 GAF domain-containing protein compare
SGL_RS16630 -1.2 -8.0 MBL fold metallo-hydrolase compare
SGL_RS15790 -1.2 -8.2 hypothetical protein compare
SGL_RS07545 -1.2 -5.5 serine/threonine-protein phosphatase compare
SGL_RS12985 -1.2 -2.4 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
SGL_RS11530 -1.2 -6.3 RluA family pseudouridine synthase compare
SGL_RS02850 -1.1 -5.5 uracil phosphoribosyltransferase compare
SGL_RS18100 -1.1 -2.8 SH3 domain-containing protein compare
SGL_RS11240 -1.1 -2.0 photosystem I reaction center subunit IV compare
SGL_RS02540 -1.1 -5.9 universal stress protein compare
SGL_RS11495 -1.1 -2.1 Ig-like domain-containing protein compare
SGL_RS14540 -1.1 -2.9 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS18040 -1.1 -5.0 phasin family protein compare
SGL_RS10360 -1.1 -3.4 hypothetical protein compare
SGL_RS03465 -1.1 -3.7 allophycocyanin subunit alpha-B compare
SGL_RS14340 -1.1 -6.0 protein phosphatase 2C domain-containing protein compare
SGL_RS09975 -1.1 -2.5 DUF29 domain-containing protein compare
SGL_RS11945 -1.1 -6.0 sirohydrochlorin chelatase compare
SGL_RS06140 -1.1 -7.4 threonine ammonia-lyase, biosynthetic compare
SGL_RS20080 -1.1 -1.8 DUF4335 domain-containing protein compare


Specific Phenotypes

For 16 genes in this experiment

For stress Ethanol in Synechocystis sp000284455 PCC 6803

For stress Ethanol across organisms