Experiment set2S529 for Synechocystis sp000284455 PCC 6803

Compare to:

control for light_bubbling experiments

200 most important genes:

  gene name fitness t score description  
SGL_RS03540 -8.2 -9.7 ABC transporter ATP-binding protein compare
SGL_RS10775 -7.9 -8.7 DUF3326 domain-containing protein compare
SGL_RS12870 -7.3 -5.8 YqeG family HAD IIIA-type phosphatase compare
SGL_RS02515 -6.9 -10.5 M56 family metallopeptidase compare
SGL_RS05375 -6.6 -5.2 hypothetical protein compare
SGL_RS06675 -6.5 -7.7 ABC transporter ATP-binding protein compare
SGL_RS06020 -6.3 -6.1 sugar ABC transporter permease compare
SGL_RS03840 -6.1 -3.9 adenylyl-sulfate kinase compare
SGL_RS15045 -6.0 -11.4 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS05880 -5.9 -5.7 sugar ABC transporter substrate-binding protein compare
SGL_RS16100 -5.9 -9.8 heavy metal translocating P-type ATPase compare
SGL_RS13055 -5.7 -3.9 protein translocase subunit SecF compare
SGL_RS06130 -5.6 -6.2 anti-sigma regulatory factor compare
SGL_RS03520 -5.6 -6.6 ABC transporter permease compare
SGL_RS14425 -5.6 -5.4 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS05380 -5.5 -4.9 monovalent cation/H(+) antiporter subunit G compare
SGL_RS03625 -5.5 -10.0 glycosyltransferase family 1 protein compare
SGL_RS16545 -5.4 -12.7 LdpA C-terminal domain-containing domain compare
SGL_RS03550 -5.3 -22.4 CDP-glucose 4,6-dehydratase compare
SGL_RS17520 -5.2 -5.1 DUF3352 domain-containing protein compare
SGL_RS05435 -5.2 -3.6 heavy metal translocating P-type ATPase compare
SGL_RS12490 -5.1 -7.5 glutamate--cysteine ligase compare
SGL_RS14445 -5.1 -4.9 hypothetical protein compare
SGL_RS03790 -5.0 -3.5 GTPase ObgE compare
SGL_RS14920 -5.0 -4.9 cation:proton antiporter compare
SGL_RS05390 -5.0 -7.6 Na(+)/H(+) antiporter subunit B compare
SGL_RS07200 -5.0 -6.0 LCP family protein compare
SGL_RS08495 -4.9 -13.1 DUF3370 domain-containing protein compare
SGL_RS06430 -4.9 -2.6 glycosyltransferase family 2 protein compare
SGL_RS17495 -4.9 -9.1 peptidoglycan editing factor PgeF compare
SGL_RS08790 -4.9 -5.0 carbohydrate ABC transporter permease compare
SGL_RS13870 -4.9 -8.0 rRNA maturation RNase YbeY compare
SGL_RS15700 -4.9 -17.4 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS12400 -4.8 -6.4 lysophospholipid acyltransferase family protein compare
SGL_RS14335 -4.7 -4.6 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS14430 -4.7 -6.6 cobalt ECF transporter T component CbiQ compare
SGL_RS14540 -4.7 -2.9 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS04510 -4.6 -4.7 DUF561 domain-containing protein compare
SGL_RS13510 -4.6 -7.8 transglycosylase domain-containing protein compare
SGL_RS05560 -4.6 -7.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS19585 -4.6 -4.8 hypothetical protein compare
SGL_RS05370 -4.6 -2.9 Na+/H+ antiporter subunit E compare
SGL_RS12770 -4.6 -4.1 uroporphyrinogen-III C-methyltransferase compare
SGL_RS11000 -4.5 -9.0 sulfate adenylyltransferase compare
SGL_RS05980 -4.5 -6.8 hypothetical protein compare
SGL_RS02665 -4.5 -3.5 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS05385 -4.5 -10.9 DUF4040 domain-containing protein compare
SGL_RS05470 -4.3 -6.4 dihydropteroate synthase compare
SGL_RS14435 -4.3 -2.0 cobalt transporter CbiM compare
SGL_RS09395 -4.3 -4.1 aldo/keto reductase compare
SGL_RS11510 -4.2 -5.8 dihydroneopterin aldolase compare
SGL_RS17470 -4.2 -7.4 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS03775 -4.2 -8.9 membrane protein compare
SGL_RS15560 -4.2 -4.8 dethiobiotin synthase compare
SGL_RS16880 -4.1 -4.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS15655 -4.1 -20.1 asparaginase compare
SGL_RS16360 -4.1 -6.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS15425 -4.1 -11.4 cobalamin biosynthesis protein CobW compare
SGL_RS04720 -4.1 -4.7 iron uptake porin compare
SGL_RS02375 -4.1 -10.6 DUF3086 domain-containing protein compare
SGL_RS10305 -4.0 -8.8 PIN/TRAM domain-containing protein compare
SGL_RS03585 -4.0 -9.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS18300 -4.0 -7.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS03560 -3.9 -14.2 class I SAM-dependent methyltransferase compare
SGL_RS16735 -3.8 -4.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS14105 -3.8 -6.6 2-succinylbenzoate--CoA ligase compare
SGL_RS03545 -3.7 -9.4 glucose-1-phosphate cytidylyltransferase compare
SGL_RS03970 -3.7 -5.0 thiamine phosphate synthase compare
SGL_RS03365 -3.7 -5.1 Ycf66 family protein compare
SGL_RS10320 -3.6 -4.3 ribosome biogenesis GTPase Der compare
SGL_RS17125 -3.6 -4.4 inositol monophosphatase family protein compare
SGL_RS04525 -3.6 -6.2 photosynthesis system II assembly factor Ycf48 compare
SGL_RS15530 -3.5 -4.6 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS09385 -3.5 -4.0 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS07840 -3.5 -6.0 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS09160 -3.5 -3.7 thioredoxin family protein compare
SGL_RS03590 -3.5 -7.2 ATP-grasp domain-containing protein compare
SGL_RS06585 -3.5 -7.6 nitrate ABC transporter ATP-binding protein compare
SGL_RS02460 -3.5 -4.9 phosphate signaling complex protein PhoU compare
SGL_RS02220 -3.5 -6.1 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS12585 -3.4 -6.6 ABC transporter permease subunit compare
SGL_RS13535 -3.4 -6.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS07605 -3.4 -5.2 HEAT repeat domain-containing protein compare
SGL_RS17650 -3.3 -4.2 hypothetical protein compare
SGL_RS08115 -3.3 -9.9 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS08275 -3.3 -6.0 tetratricopeptide repeat protein compare
SGL_RS02260 -3.3 -4.1 HEAT repeat domain-containing protein compare
SGL_RS04490 -3.2 -1.8 2TM domain-containing protein compare
SGL_RS14860 -3.2 -6.3 8-amino-7-oxononanoate synthase compare
SGL_RS12920 -3.1 -3.0 hypothetical protein compare
SGL_RS08765 -3.1 -4.2 2-phosphosulfolactate phosphatase family protein compare
SGL_RS04735 -3.0 -5.4 hypothetical protein compare
SGL_RS04230 -3.0 -4.7 exonuclease subunit SbcC compare
SGL_RS18270 -3.0 -6.4 family 10 glycosylhydrolase compare
SGL_RS03555 -3.0 -11.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS08155 -3.0 -4.5 Spy/CpxP family protein refolding chaperone compare
SGL_RS09845 -3.0 -6.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS12575 -2.9 -5.2 riboflavin synthase compare
SGL_RS08175 -2.9 -6.7 serine hydrolase compare
SGL_RS12930 -2.9 -3.8 DUF1257 domain-containing protein compare
SGL_RS12335 -2.9 -11.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS15620 -2.8 -4.2 cobyric acid synthase CobQ compare
SGL_RS18180 -2.8 -7.9 ABC transporter permease compare
SGL_RS09720 -2.8 -6.5 beta-ketoacyl-ACP synthase compare
SGL_RS18170 -2.8 -4.9 PspA/IM30 family protein compare
SGL_RS14905 -2.7 -4.6 30S ribosomal protein PSRP-3 compare
SGL_RS02580 -2.7 -3.5 DUF1818 family protein compare
SGL_RS10155 -2.7 -5.8 hypothetical protein compare
SGL_RS15870 -2.7 -11.4 septum site-determining protein MinC compare
SGL_RS06590 -2.7 -6.2 nitrate ABC transporter permease compare
SGL_RS03425 -2.7 -4.8 precorrin-3B C(17)-methyltransferase compare
SGL_RS17305 -2.7 -5.1 pyrroline-5-carboxylate reductase compare
SGL_RS05440 -2.6 -3.3 ACP S-malonyltransferase compare
SGL_RS06595 -2.6 -5.4 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS17685 -2.5 -13.0 ArsB/NhaD family transporter compare
SGL_RS08710 -2.5 -4.9 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS07935 -2.4 -4.6 hypothetical protein compare
SGL_RS16940 -2.4 -2.7 dephospho-CoA kinase compare
SGL_RS03185 -2.4 -4.5 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS02145 -2.4 -13.9 metallophosphoesterase compare
SGL_RS01905 -2.4 -12.7 GDP-mannose 4,6-dehydratase compare
SGL_RS08535 -2.3 -4.3 NIL domain-containing protein compare
SGL_RS12235 -2.3 -4.7 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS13910 -2.3 -6.2 phasin family protein compare
SGL_RS09820 -2.3 -4.8 ribosome maturation factor RimM compare
SGL_RS14045 -2.3 -5.4 hypothetical protein compare
SGL_RS01900 -2.3 -7.6 GDP-L-fucose synthase compare
SGL_RS12755 -2.2 -11.6 IMS domain-containing protein compare
SGL_RS15865 -2.2 -4.3 septum site-determining protein MinD compare
SGL_RS12925 -2.2 -7.1 AAA family ATPase compare
SGL_RS13370 -2.2 -3.8 exonuclease SbcCD subunit D compare
SGL_RS17405 -2.2 -9.9 L-2-hydroxyglutarate oxidase compare
SGL_RS04775 -2.1 -5.6 alpha/beta hydrolase compare
SGL_RS07565 -2.1 -2.6 hypothetical protein compare
SGL_RS02095 -2.1 -8.5 dTDP-4-dehydrorhamnose reductase compare
SGL_RS03950 -2.1 -10.1 homocysteine biosynthesis protein compare
SGL_RS13685 -2.1 -9.9 ABC transporter ATP-binding protein compare
SGL_RS05235 -2.0 -6.2 phycobilisome linker polypeptide compare
SGL_RS13550 -2.0 -2.1 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS10130 -2.0 -12.0 fatty acid desaturase compare
SGL_RS06440 -2.0 -4.8 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS13855 -1.9 -6.8 hypothetical protein compare
SGL_RS05210 -1.9 -7.3 SLBB domain-containing protein compare
SGL_RS09305 -1.9 -6.0 adenosyl-hopene transferase HpnH compare
SGL_RS08160 -1.9 -4.1 hypothetical protein compare
SGL_RS11305 -1.9 -5.9 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS15435 -1.9 -10.2 PD40 domain-containing protein compare
SGL_RS16950 -1.8 -9.7 phosphoketolase compare
SGL_RS04660 -1.8 -4.6 phycobilisome rod-core linker polypeptide compare
SGL_RS03250 -1.8 -5.8 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS08845 -1.8 -9.4 LysR family transcriptional regulator compare
SGL_RS15370 -1.8 -4.3 DnaJ C-terminal domain-containing protein compare
SGL_RS17270 -1.7 -4.7 hypothetical protein compare
SGL_RS03505 -1.7 -13.2 exopolysaccharide transport family protein compare
SGL_RS15305 -1.7 -9.8 ribonuclease HI compare
SGL_RS10480 -1.7 -9.4 metallophosphoesterase family protein compare
SGL_RS12545 -1.7 -1.8 GTPase Era compare
SGL_RS11985 -1.7 -2.2 LysR family transcriptional regulator compare
SGL_RS13900 -1.7 -9.9 AI-2E family transporter compare
SGL_RS00825 -1.6 -6.7 hypothetical protein compare
SGL_RS14585 -1.6 -2.5 TolB family protein compare
SGL_RS13465 -1.6 -9.4 class II fumarate hydratase compare
SGL_RS18320 -1.6 -10.4 serine/threonine-protein kinase compare
SGL_RS10245 -1.6 -5.4 glycoside hydrolase family protein compare
SGL_RS02475 -1.6 -3.4 YlxR family protein compare
SGL_RS17330 -1.6 -10.1 biosynthetic arginine decarboxylase compare
SGL_RS16860 -1.6 -5.9 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS14195 -1.5 -5.4 phosphate ABC transporter permease subunit PstC compare
SGL_RS15785 -1.5 -7.0 ParA family protein compare
SGL_RS17175 -1.5 -3.7 allophycocyanin subunit beta compare
SGL_RS13555 -1.4 -4.4 aldehyde oxygenase (deformylating) compare
SGL_RS14025 -1.4 -10.6 gamma-glutamyl-phosphate reductase compare
SGL_RS12625 -1.4 -3.2 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS11495 -1.4 -1.7 Ig-like domain-containing protein compare
SGL_RS00830 -1.4 -4.9 hypothetical protein compare
SGL_RS16915 -1.4 -3.7 trigger factor compare
SGL_RS16670 -1.4 -11.6 DUF5942 domain-containing protein compare
SGL_RS05320 -1.4 -7.3 PBP1A family penicillin-binding protein compare
SGL_RS11760 -1.4 -7.4 radical SAM protein compare
SGL_RS07870 -1.4 -3.7 Ycf51 family protein compare
SGL_RS00320 -1.4 -3.2 helix-turn-helix transcriptional regulator compare
SGL_RS13495 -1.4 -7.6 AarF/ABC1/UbiB kinase family protein compare
SGL_RS01150 -1.4 -2.0 nucleotidyltransferase family protein compare
SGL_RS11025 -1.4 -7.5 oxidoreductase compare
SGL_RS15790 -1.4 -6.6 hypothetical protein compare
SGL_RS12210 -1.4 -6.2 type IV pilus twitching motility protein PilT compare
SGL_RS03640 -1.4 -8.9 UDP-glucose 4-epimerase GalE compare
SGL_RS06920 -1.3 -6.0 serine/threonine protein kinase compare
SGL_RS02280 -1.3 -3.4 Rne/Rng family ribonuclease compare
SGL_RS17715 -1.3 -2.6 DUF4327 family protein compare
SGL_RS08605 -1.3 -4.3 DUF3120 domain-containing protein compare
SGL_RS04155 -1.3 -1.6 reverse transcriptase domain-containing protein compare
SGL_RS14190 -1.3 -7.4 phosphate ABC transporter permease PstA compare
SGL_RS14505 -1.3 -3.7 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS01200 -1.3 -6.0 ParA family protein compare
SGL_RS14185 -1.3 -5.5 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS03675 -1.3 -4.0 hypothetical protein compare
SGL_RS03265 -1.3 -2.3 photosystem II complex extrinsic protein PsbU compare
SGL_RS03690 -1.3 -10.6 glycosyltransferase compare
SGL_RS13905 -1.3 -5.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in light_bubbling experiments