Experiment set2S528 for Synechocystis sp000284455 PCC 6803

Compare to:

control for light_bubbling experiments

200 most important genes:

  gene name fitness t score description  
SGL_RS08790 -5.6 -4.8 carbohydrate ABC transporter permease compare
SGL_RS02665 -5.3 -4.1 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS06675 -5.3 -8.4 ABC transporter ATP-binding protein compare
SGL_RS12400 -5.3 -5.1 lysophospholipid acyltransferase family protein compare
SGL_RS05435 -5.2 -3.6 heavy metal translocating P-type ATPase compare
SGL_RS07200 -5.1 -8.4 LCP family protein compare
SGL_RS06020 -5.0 -7.9 sugar ABC transporter permease compare
SGL_RS12870 -5.0 -7.6 YqeG family HAD IIIA-type phosphatase compare
SGL_RS13055 -5.0 -4.8 protein translocase subunit SecF compare
SGL_RS02515 -4.9 -8.3 M56 family metallopeptidase compare
SGL_RS03540 -4.8 -12.2 ABC transporter ATP-binding protein compare
SGL_RS03840 -4.8 -3.8 adenylyl-sulfate kinase compare
SGL_RS17495 -4.7 -10.7 peptidoglycan editing factor PgeF compare
SGL_RS14445 -4.6 -4.5 hypothetical protein compare
SGL_RS14430 -4.6 -8.7 cobalt ECF transporter T component CbiQ compare
SGL_RS15045 -4.4 -10.8 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS11000 -4.4 -9.1 sulfate adenylyltransferase compare
SGL_RS14920 -4.4 -5.0 cation:proton antiporter compare
SGL_RS17520 -4.3 -8.0 DUF3352 domain-containing protein compare
SGL_RS03520 -4.2 -5.4 ABC transporter permease compare
SGL_RS06130 -4.1 -5.0 anti-sigma regulatory factor compare
SGL_RS17650 -4.1 -4.5 hypothetical protein compare
SGL_RS06430 -4.1 -2.7 glycosyltransferase family 2 protein compare
SGL_RS12770 -4.0 -6.5 uroporphyrinogen-III C-methyltransferase compare
SGL_RS12490 -4.0 -7.5 glutamate--cysteine ligase compare
SGL_RS10775 -3.9 -13.4 DUF3326 domain-containing protein compare
SGL_RS16100 -3.8 -15.6 heavy metal translocating P-type ATPase compare
SGL_RS05560 -3.8 -8.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS14425 -3.8 -7.0 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS03625 -3.7 -9.6 glycosyltransferase family 1 protein compare
SGL_RS05880 -3.7 -5.3 sugar ABC transporter substrate-binding protein compare
SGL_RS13870 -3.7 -6.9 rRNA maturation RNase YbeY compare
SGL_RS04720 -3.6 -4.6 iron uptake porin compare
SGL_RS04510 -3.6 -7.2 DUF561 domain-containing protein compare
SGL_RS13510 -3.5 -11.2 transglycosylase domain-containing protein compare
SGL_RS09385 -3.4 -5.3 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS03550 -3.4 -13.4 CDP-glucose 4,6-dehydratase compare
SGL_RS05440 -3.4 -3.1 ACP S-malonyltransferase compare
SGL_RS08155 -3.3 -4.6 Spy/CpxP family protein refolding chaperone compare
SGL_RS03365 -3.3 -6.3 Ycf66 family protein compare
SGL_RS16545 -3.3 -16.9 LdpA C-terminal domain-containing domain compare
SGL_RS05390 -3.3 -11.7 Na(+)/H(+) antiporter subunit B compare
SGL_RS02260 -3.3 -4.0 HEAT repeat domain-containing protein compare
SGL_RS05375 -3.2 -4.8 hypothetical protein compare
SGL_RS09395 -3.2 -5.4 aldo/keto reductase compare
SGL_RS17125 -3.1 -5.9 inositol monophosphatase family protein compare
SGL_RS08495 -3.1 -14.2 DUF3370 domain-containing protein compare
SGL_RS07840 -3.0 -3.3 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS15530 -3.0 -5.1 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS05980 -3.0 -5.8 hypothetical protein compare
SGL_RS17470 -3.0 -7.3 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS04775 -2.9 -6.1 alpha/beta hydrolase compare
SGL_RS08275 -2.9 -6.1 tetratricopeptide repeat protein compare
SGL_RS19585 -2.9 -5.4 hypothetical protein compare
SGL_RS02220 -2.8 -6.9 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS15655 -2.8 -14.0 asparaginase compare
SGL_RS02375 -2.8 -8.1 DUF3086 domain-containing protein compare
SGL_RS14585 -2.8 -3.3 TolB family protein compare
SGL_RS06585 -2.8 -6.9 nitrate ABC transporter ATP-binding protein compare
SGL_RS03425 -2.7 -4.9 precorrin-3B C(17)-methyltransferase compare
SGL_RS03775 -2.7 -10.1 membrane protein compare
SGL_RS02460 -2.7 -4.3 phosphate signaling complex protein PhoU compare
SGL_RS15700 -2.7 -11.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS10305 -2.7 -10.8 PIN/TRAM domain-containing protein compare
SGL_RS08710 -2.6 -5.6 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS03585 -2.6 -13.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS08765 -2.6 -4.4 2-phosphosulfolactate phosphatase family protein compare
SGL_RS02580 -2.6 -4.3 DUF1818 family protein compare
SGL_RS03970 -2.6 -5.2 thiamine phosphate synthase compare
SGL_RS05470 -2.5 -5.4 dihydropteroate synthase compare
SGL_RS16940 -2.5 -3.8 dephospho-CoA kinase compare
SGL_RS14335 -2.5 -5.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS16880 -2.5 -4.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS14540 -2.5 -4.7 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS14435 -2.5 -1.9 cobalt transporter CbiM compare
SGL_RS05385 -2.5 -10.3 DUF4040 domain-containing protein compare
SGL_RS18180 -2.5 -9.3 ABC transporter permease compare
SGL_RS14905 -2.5 -5.7 30S ribosomal protein PSRP-3 compare
SGL_RS06590 -2.4 -6.2 nitrate ABC transporter permease compare
SGL_RS16360 -2.4 -4.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS09845 -2.4 -7.2 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS05380 -2.4 -5.3 monovalent cation/H(+) antiporter subunit G compare
SGL_RS15560 -2.4 -5.3 dethiobiotin synthase compare
SGL_RS18300 -2.4 -6.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS18270 -2.4 -5.8 family 10 glycosylhydrolase compare
SGL_RS05370 -2.4 -3.1 Na+/H+ antiporter subunit E compare
SGL_RS03560 -2.3 -12.9 class I SAM-dependent methyltransferase compare
SGL_RS08175 -2.3 -5.7 serine hydrolase compare
SGL_RS03590 -2.3 -6.7 ATP-grasp domain-containing protein compare
SGL_RS15425 -2.3 -9.0 cobalamin biosynthesis protein CobW compare
SGL_RS12335 -2.3 -8.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS09720 -2.2 -6.4 beta-ketoacyl-ACP synthase compare
SGL_RS11510 -2.2 -4.6 dihydroneopterin aldolase compare
SGL_RS13535 -2.2 -4.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS14860 -2.2 -4.7 8-amino-7-oxononanoate synthase compare
SGL_RS03185 -2.2 -3.5 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS12585 -2.1 -5.8 ABC transporter permease subunit compare
SGL_RS07565 -2.1 -3.0 hypothetical protein compare
SGL_RS07935 -2.1 -3.7 hypothetical protein compare
SGL_RS15865 -2.0 -5.3 septum site-determining protein MinD compare
SGL_RS12575 -2.0 -4.1 riboflavin synthase compare
SGL_RS16735 -2.0 -2.9 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS12235 -2.0 -4.2 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS17305 -2.0 -4.5 pyrroline-5-carboxylate reductase compare
SGL_RS14045 -1.9 -3.2 hypothetical protein compare
SGL_RS04735 -1.9 -4.7 hypothetical protein compare
SGL_RS12920 -1.9 -2.9 hypothetical protein compare
SGL_RS17685 -1.9 -8.4 ArsB/NhaD family transporter compare
SGL_RS15620 -1.9 -2.9 cobyric acid synthase CobQ compare
SGL_RS07605 -1.9 -3.5 HEAT repeat domain-containing protein compare
SGL_RS06440 -1.9 -5.4 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS04230 -1.8 -4.5 exonuclease subunit SbcC compare
SGL_RS06595 -1.8 -4.3 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS13685 -1.8 -8.6 ABC transporter ATP-binding protein compare
SGL_RS04525 -1.8 -4.0 photosynthesis system II assembly factor Ycf48 compare
SGL_RS08160 -1.8 -4.7 hypothetical protein compare
SGL_RS12925 -1.8 -8.0 AAA family ATPase compare
SGL_RS03545 -1.8 -6.5 glucose-1-phosphate cytidylyltransferase compare
SGL_RS01905 -1.8 -11.1 GDP-mannose 4,6-dehydratase compare
SGL_RS15870 -1.8 -8.7 septum site-determining protein MinC compare
SGL_RS04490 -1.8 -2.6 2TM domain-containing protein compare
SGL_RS03555 -1.8 -11.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS01900 -1.7 -6.0 GDP-L-fucose synthase compare
SGL_RS02095 -1.7 -8.1 dTDP-4-dehydrorhamnose reductase compare
SGL_RS09160 -1.7 -4.0 thioredoxin family protein compare
SGL_RS08115 -1.7 -5.5 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS12755 -1.7 -9.0 IMS domain-containing protein compare
SGL_RS13370 -1.7 -3.0 exonuclease SbcCD subunit D compare
SGL_RS07870 -1.6 -3.4 Ycf51 family protein compare
SGL_RS12545 -1.6 -2.3 GTPase Era compare
SGL_RS14105 -1.6 -4.3 2-succinylbenzoate--CoA ligase compare
SGL_RS11985 -1.6 -2.2 LysR family transcriptional regulator compare
SGL_RS12930 -1.6 -2.5 DUF1257 domain-containing protein compare
SGL_RS15370 -1.6 -4.0 DnaJ C-terminal domain-containing protein compare
SGL_RS03950 -1.6 -6.3 homocysteine biosynthesis protein compare
SGL_RS18170 -1.6 -4.2 PspA/IM30 family protein compare
SGL_RS15435 -1.6 -10.2 PD40 domain-containing protein compare
SGL_RS08845 -1.6 -5.4 LysR family transcriptional regulator compare
SGL_RS03250 -1.5 -5.0 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS17405 -1.5 -5.2 L-2-hydroxyglutarate oxidase compare
SGL_RS10320 -1.5 -2.7 ribosome biogenesis GTPase Der compare
SGL_RS06355 -1.5 -2.5 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS10245 -1.5 -6.3 glycoside hydrolase family protein compare
SGL_RS02145 -1.5 -10.7 metallophosphoesterase compare
SGL_RS03790 -1.4 -3.4 GTPase ObgE compare
SGL_RS11495 -1.4 -1.7 Ig-like domain-containing protein compare
SGL_RS05480 -1.4 -7.3 FAD-dependent oxidoreductase compare
SGL_RS13855 -1.4 -5.9 hypothetical protein compare
SGL_RS11675 -1.4 -3.8 chromophore lyase CpcT/CpeT compare
SGL_RS04820 -1.4 -2.3 LysR family transcriptional regulator compare
SGL_RS14025 -1.4 -8.8 gamma-glutamyl-phosphate reductase compare
SGL_RS08535 -1.4 -2.7 NIL domain-containing protein compare
SGL_RS11025 -1.3 -5.3 oxidoreductase compare
SGL_RS11135 -1.3 -2.1 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS06920 -1.3 -6.1 serine/threonine protein kinase compare
SGL_RS16860 -1.3 -7.2 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS04155 -1.3 -2.9 reverse transcriptase domain-containing protein compare
SGL_RS12540 -1.3 -6.2 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS15790 -1.3 -7.6 hypothetical protein compare
SGL_RS17330 -1.2 -7.3 biosynthetic arginine decarboxylase compare
SGL_RS16950 -1.2 -7.6 phosphoketolase compare
SGL_RS11325 -1.2 -3.6 pitrilysin family protein compare
SGL_RS10155 -1.2 -3.8 hypothetical protein compare
SGL_RS13905 -1.2 -3.7 hypothetical protein compare
SGL_RS04660 -1.2 -2.3 phycobilisome rod-core linker polypeptide compare
SGL_RS10130 -1.2 -10.1 fatty acid desaturase compare
SGL_RS13770 -1.2 -1.6 DUF3082 domain-containing protein compare
SGL_RS13900 -1.2 -9.0 AI-2E family transporter compare
SGL_RS16670 -1.2 -7.5 DUF5942 domain-containing protein compare
SGL_RS14185 -1.1 -5.3 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS11760 -1.1 -6.4 radical SAM protein compare
SGL_RS14225 -1.1 -2.5 PspA/IM30 family protein compare
SGL_RS15785 -1.1 -6.0 ParA family protein compare
SGL_RS05320 -1.1 -6.2 PBP1A family penicillin-binding protein compare
SGL_RS13465 -1.1 -6.8 class II fumarate hydratase compare
SGL_RS03265 -1.1 -2.1 photosystem II complex extrinsic protein PsbU compare
SGL_RS06755 -1.1 -6.2 bacterioferritin-associated ferredoxin compare
SGL_RS07180 -1.1 -4.8 carboxynorspermidine decarboxylase compare
SGL_RS05400 -1.1 -2.6 Crp/Fnr family transcriptional regulator compare
SGL_RS13550 -1.0 -1.5 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS09305 -1.0 -4.9 adenosyl-hopene transferase HpnH compare
SGL_RS09820 -1.0 -2.8 ribosome maturation factor RimM compare
SGL_RS06640 -1.0 -2.1 DUF4168 domain-containing protein compare
SGL_RS00800 -1.0 -2.6 putative addiction module antidote protein compare
SGL_RS07130 -1.0 -8.0 AAA-like domain-containing protein compare
SGL_RS15305 -1.0 -6.1 ribonuclease HI compare
SGL_RS03190 -1.0 -1.9 universal stress protein compare
SGL_RS02280 -1.0 -2.6 Rne/Rng family ribonuclease compare
SGL_RS15875 -1.0 -6.3 FHA domain-containing protein compare
SGL_RS14575 -1.0 -1.6 RNA-binding protein compare
SGL_RS00830 -0.9 -3.3 hypothetical protein compare
SGL_RS16770 -0.9 -3.4 LptF/LptG family permease compare
SGL_RS13175 -0.9 -4.4 GerMN domain-containing protein compare
SGL_RS14190 -0.9 -4.9 phosphate ABC transporter permease PstA compare
SGL_RS08605 -0.9 -4.4 DUF3120 domain-containing protein compare
SGL_RS00825 -0.9 -3.8 hypothetical protein compare
SGL_RS16915 -0.9 -2.7 trigger factor compare
SGL_RS18320 -0.9 -6.5 serine/threonine-protein kinase compare
SGL_RS05240 -0.9 -2.5 phycobilisome linker polypeptide compare
SGL_RS12210 -0.9 -5.7 type IV pilus twitching motility protein PilT compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in light_bubbling experiments