Experiment set2S514 for Synechocystis sp000284455 PCC 6803

Compare to:

control for light_bubbling experiments

200 most important genes:

  gene name fitness t score description  
SGL_RS04720 -5.1 -3.5 iron uptake porin compare
SGL_RS05435 -4.9 -3.4 heavy metal translocating P-type ATPase compare
SGL_RS03840 -4.4 -4.2 adenylyl-sulfate kinase compare
SGL_RS05560 -4.2 -8.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS17520 -4.0 -9.4 DUF3352 domain-containing protein compare
SGL_RS05440 -3.9 -3.7 ACP S-malonyltransferase compare
SGL_RS14445 -3.7 -6.5 hypothetical protein compare
SGL_RS12770 -3.5 -6.2 uroporphyrinogen-III C-methyltransferase compare
SGL_RS16100 -3.3 -14.2 heavy metal translocating P-type ATPase compare
SGL_RS03365 -3.3 -8.4 Ycf66 family protein compare
SGL_RS08155 -3.1 -3.6 Spy/CpxP family protein refolding chaperone compare
SGL_RS14435 -3.1 -3.1 cobalt transporter CbiM compare
SGL_RS14430 -3.1 -8.4 cobalt ECF transporter T component CbiQ compare
SGL_RS10305 -3.0 -12.7 PIN/TRAM domain-containing protein compare
SGL_RS02260 -2.9 -4.9 HEAT repeat domain-containing protein compare
SGL_RS17650 -2.8 -2.7 hypothetical protein compare
SGL_RS12490 -2.8 -7.1 glutamate--cysteine ligase compare
SGL_RS11000 -2.8 -7.3 sulfate adenylyltransferase compare
SGL_RS02665 -2.8 -5.2 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS07605 -2.7 -7.0 HEAT repeat domain-containing protein compare
SGL_RS06430 -2.7 -3.0 glycosyltransferase family 2 protein compare
SGL_RS13055 -2.7 -3.2 protein translocase subunit SecF compare
SGL_RS13870 -2.7 -7.7 rRNA maturation RNase YbeY compare
SGL_RS12030 -2.7 -8.3 extracellular solute-binding protein compare
SGL_RS09395 -2.6 -5.7 aldo/keto reductase compare
SGL_RS12400 -2.6 -5.6 lysophospholipid acyltransferase family protein compare
SGL_RS05470 -2.6 -6.6 dihydropteroate synthase compare
SGL_RS08790 -2.5 -3.7 carbohydrate ABC transporter permease compare
SGL_RS02220 -2.5 -5.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS12870 -2.5 -6.3 YqeG family HAD IIIA-type phosphatase compare
SGL_RS15560 -2.5 -4.4 dethiobiotin synthase compare
SGL_RS03970 -2.4 -4.9 thiamine phosphate synthase compare
SGL_RS14860 -2.4 -5.2 8-amino-7-oxononanoate synthase compare
SGL_RS08710 -2.4 -5.8 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS09385 -2.4 -4.2 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS07840 -2.3 -3.3 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS07200 -2.3 -5.6 LCP family protein compare
SGL_RS16940 -2.3 -4.2 dephospho-CoA kinase compare
SGL_RS12585 -2.3 -4.9 ABC transporter permease subunit compare
SGL_RS12575 -2.2 -4.7 riboflavin synthase compare
SGL_RS18300 -2.2 -6.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS17470 -2.2 -6.0 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS03185 -2.2 -4.9 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS16880 -2.2 -3.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS16735 -2.1 -4.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS05880 -2.1 -4.5 sugar ABC transporter substrate-binding protein compare
SGL_RS09720 -2.1 -4.8 beta-ketoacyl-ACP synthase compare
SGL_RS06590 -2.1 -8.6 nitrate ABC transporter permease compare
SGL_RS03775 -2.1 -6.0 membrane protein compare
SGL_RS16360 -2.1 -4.6 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS06020 -2.1 -6.4 sugar ABC transporter permease compare
SGL_RS08275 -2.1 -5.4 tetratricopeptide repeat protein compare
SGL_RS15530 -2.0 -3.5 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS14105 -2.0 -5.2 2-succinylbenzoate--CoA ligase compare
SGL_RS06675 -2.0 -8.0 ABC transporter ATP-binding protein compare
SGL_RS08175 -2.0 -4.6 serine hydrolase compare
SGL_RS06585 -2.0 -6.8 nitrate ABC transporter ATP-binding protein compare
SGL_RS15620 -2.0 -5.0 cobyric acid synthase CobQ compare
SGL_RS09820 -2.0 -2.5 ribosome maturation factor RimM compare
SGL_RS11510 -1.9 -3.6 dihydroneopterin aldolase compare
SGL_RS14540 -1.9 -3.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS10320 -1.9 -4.4 ribosome biogenesis GTPase Der compare
SGL_RS07935 -1.8 -3.9 hypothetical protein compare
SGL_RS06595 -1.8 -6.3 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS12545 -1.8 -2.9 GTPase Era compare
SGL_RS04230 -1.8 -3.7 exonuclease subunit SbcC compare
SGL_RS17495 -1.7 -6.5 peptidoglycan editing factor PgeF compare
SGL_RS13855 -1.7 -6.8 hypothetical protein compare
SGL_RS14045 -1.7 -3.6 hypothetical protein compare
SGL_RS09845 -1.7 -8.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS02375 -1.7 -9.4 DUF3086 domain-containing protein compare
SGL_RS15045 -1.7 -8.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS09160 -1.7 -3.5 thioredoxin family protein compare
SGL_RS14425 -1.6 -4.5 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS06130 -1.6 -3.4 anti-sigma regulatory factor compare
SGL_RS13535 -1.6 -4.3 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS02580 -1.6 -2.0 DUF1818 family protein compare
SGL_RS04735 -1.6 -4.1 hypothetical protein compare
SGL_RS10155 -1.5 -5.6 hypothetical protein compare
SGL_RS11495 -1.5 -2.7 Ig-like domain-containing protein compare
SGL_RS15435 -1.5 -10.5 PD40 domain-containing protein compare
SGL_RS08765 -1.5 -2.4 2-phosphosulfolactate phosphatase family protein compare
SGL_RS11675 -1.5 -6.3 chromophore lyase CpcT/CpeT compare
SGL_RS14335 -1.5 -3.5 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS07335 -1.5 -2.2 hypothetical protein compare
SGL_RS03265 -1.5 -2.5 photosystem II complex extrinsic protein PsbU compare
SGL_RS12930 -1.5 -2.9 DUF1257 domain-containing protein compare
SGL_RS04490 -1.4 -1.8 2TM domain-containing protein compare
SGL_RS13685 -1.4 -7.7 ABC transporter ATP-binding protein compare
SGL_RS04525 -1.4 -4.1 photosynthesis system II assembly factor Ycf48 compare
SGL_RS02095 -1.4 -7.1 dTDP-4-dehydrorhamnose reductase compare
SGL_RS12335 -1.4 -5.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03950 -1.4 -6.9 homocysteine biosynthesis protein compare
SGL_RS08115 -1.4 -5.9 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS03190 -1.4 -3.2 universal stress protein compare
SGL_RS03425 -1.4 -3.3 precorrin-3B C(17)-methyltransferase compare
SGL_RS08605 -1.4 -5.0 DUF3120 domain-containing protein compare
SGL_RS06755 -1.3 -8.1 bacterioferritin-associated ferredoxin compare
SGL_RS18180 -1.3 -6.5 ABC transporter permease compare
SGL_RS15425 -1.3 -7.9 cobalamin biosynthesis protein CobW compare
SGL_RS06355 -1.3 -2.8 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS12925 -1.3 -6.4 AAA family ATPase compare
SGL_RS13555 -1.3 -4.7 aldehyde oxygenase (deformylating) compare
SGL_RS04155 -1.3 -3.1 reverse transcriptase domain-containing protein compare
SGL_RS00830 -1.3 -4.6 hypothetical protein compare
SGL_RS03065 -1.3 -4.3 heat-inducible transcriptional repressor HrcA compare
SGL_RS03520 -1.2 -4.6 ABC transporter permease compare
SGL_RS08535 -1.2 -3.2 NIL domain-containing protein compare
SGL_RS12555 -1.2 -3.4 alpha-mannosidase compare
SGL_RS13370 -1.2 -3.0 exonuclease SbcCD subunit D compare
SGL_RS17305 -1.2 -2.8 pyrroline-5-carboxylate reductase compare
SGL_RS12235 -1.2 -1.8 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS03790 -1.2 -2.9 GTPase ObgE compare
SGL_RS12920 -1.2 -1.8 hypothetical protein compare
SGL_RS17125 -1.1 -4.3 inositol monophosphatase family protein compare
SGL_RS04580 -1.1 -3.0 DNA topoisomerase (ATP-hydrolyzing) subunit A compare
SGL_RS11985 -1.1 -1.7 LysR family transcriptional regulator compare
SGL_RS00320 -1.1 -3.0 helix-turn-helix transcriptional regulator compare
SGL_RS14905 -1.1 -3.9 30S ribosomal protein PSRP-3 compare
SGL_RS07660 -1.1 -2.9 ferredoxin family protein compare
SGL_RS02460 -1.1 -2.5 phosphate signaling complex protein PhoU compare
SGL_RS15875 -1.1 -6.2 FHA domain-containing protein compare
SGL_RS07870 -1.0 -2.3 Ycf51 family protein compare
SGL_RS14225 -1.0 -2.2 PspA/IM30 family protein compare
SGL_RS14585 -1.0 -1.7 TolB family protein compare
SGL_RS08160 -1.0 -3.7 hypothetical protein compare
SGL_RS03440 -1.0 -4.2 PAM68 family protein compare
SGL_RS15370 -1.0 -3.4 DnaJ C-terminal domain-containing protein compare
SGL_RS19590 -1.0 -1.5 hypothetical protein compare
SGL_RS02515 -1.0 -3.5 M56 family metallopeptidase compare
SGL_RS11970 -1.0 -1.9 HNH endonuclease compare
SGL_RS09890 -1.0 -4.4 DUF3007 family protein compare
SGL_RS15805 -1.0 -5.8 two component system response regulator RpaA compare
SGL_RS17405 -1.0 -5.7 L-2-hydroxyglutarate oxidase compare
SGL_RS03540 -1.0 -4.9 ABC transporter ATP-binding protein compare
SGL_RS15305 -1.0 -4.8 ribonuclease HI compare
SGL_RS13510 -1.0 -5.7 transglycosylase domain-containing protein compare
SGL_RS10130 -1.0 -7.5 fatty acid desaturase compare
SGL_RS17330 -1.0 -5.2 biosynthetic arginine decarboxylase compare
SGL_RS15870 -0.9 -3.8 septum site-determining protein MinC compare
SGL_RS12820 -0.9 -5.4 1,4-alpha-glucan branching enzyme compare
SGL_RS13170 -0.9 -3.8 histidine kinase compare
SGL_RS14505 -0.9 -4.2 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS16915 -0.9 -2.9 trigger factor compare
SGL_RS04995 -0.9 -2.2 hypothetical protein compare
SGL_RS05980 -0.9 -2.8 hypothetical protein compare
SGL_RS13910 -0.9 -3.3 phasin family protein compare
SGL_RS11240 -0.9 -1.7 photosystem I reaction center subunit IV compare
SGL_RS02850 -0.9 -3.9 uracil phosphoribosyltransferase compare
SGL_RS06600 -0.9 -5.8 anthranilate phosphoribosyltransferase family protein compare
SGL_RS08950 -0.9 -2.1 DUF2555 domain-containing protein compare
SGL_RS13770 -0.9 -1.3 DUF3082 domain-containing protein compare
SGL_RS15490 -0.8 -4.0 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS18215 -0.8 -2.4 pentapeptide repeat-containing protein compare
SGL_RS11025 -0.8 -5.3 oxidoreductase compare
SGL_RS03085 -0.8 -2.9 DUF2862 domain-containing protein compare
SGL_RS19555 -0.8 -2.1 hypothetical protein compare
SGL_RS07930 -0.8 -4.6 hypothetical protein compare
SGL_RS13900 -0.8 -5.6 AI-2E family transporter compare
SGL_RS16860 -0.8 -4.2 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS01205 -0.8 -4.4 ParB/RepB/Spo0J family partition protein compare
SGL_RS15480 -0.8 -3.2 biopolymer transporter ExbD compare
SGL_RS11945 -0.8 -4.3 sirohydrochlorin chelatase compare
SGL_RS04820 -0.8 -1.7 LysR family transcriptional regulator compare
SGL_RS03420 -0.8 -4.0 UbiD family decarboxylase compare
SGL_RS03060 -0.8 -3.1 phosphoadenosine phosphosulfate reductase compare
SGL_RS00825 -0.8 -3.3 hypothetical protein compare
SGL_RS04510 -0.8 -4.8 DUF561 domain-containing protein compare
SGL_RS12600 -0.8 -2.3 DUF2062 domain-containing protein compare
SGL_RS02845 -0.8 -1.3 thylakoid membrane protein compare
SGL_RS05480 -0.8 -3.0 FAD-dependent oxidoreductase compare
SGL_RS14660 -0.8 -2.4 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
SGL_RS15485 -0.8 -3.7 biopolymer transporter ExbD compare
SGL_RS14190 -0.8 -4.2 phosphate ABC transporter permease PstA compare
SGL_RS15925 -0.8 -5.8 ATP-binding protein compare
SGL_RS10775 -0.8 -4.5 DUF3326 domain-containing protein compare
SGL_RS13920 -0.7 -3.6 hypothetical protein compare
SGL_RS06350 -0.7 -2.0 BMC domain-containing protein compare
SGL_RS17175 -0.7 -1.7 allophycocyanin subunit beta compare
SGL_RS04660 -0.7 -1.8 phycobilisome rod-core linker polypeptide compare
SGL_RS02825 -0.7 -4.4 translational GTPase TypA compare
SGL_RS11135 -0.7 -1.3 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS03870 -0.7 -5.1 histidinol dehydrogenase compare
SGL_RS04390 -0.7 -3.0 DUF433 domain-containing protein compare
SGL_RS15785 -0.7 -5.4 ParA family protein compare
SGL_RS14920 -0.7 -1.8 cation:proton antiporter compare
SGL_RS05445 -0.7 -2.3 response regulator compare
SGL_RS11910 -0.7 -4.9 hemolysin family protein compare
SGL_RS05235 -0.7 -2.3 phycobilisome linker polypeptide compare
SGL_RS11035 -0.7 -3.0 LapA family protein compare
SGL_RS16955 -0.7 -2.8 site-2 protease family protein compare
SGL_RS17340 -0.7 -1.6 quinolinate synthase NadA compare
SGL_RS01200 -0.7 -3.9 ParA family protein compare
SGL_RS12625 -0.7 -3.0 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS14195 -0.7 -3.9 phosphate ABC transporter permease subunit PstC compare
SGL_RS00800 -0.7 -2.0 putative addiction module antidote protein compare
SGL_RS15500 -0.7 -5.5 hypothetical protein compare
SGL_RS07180 -0.7 -3.7 carboxynorspermidine decarboxylase compare
SGL_RS20180 -0.7 -1.2 membrane protein compare
SGL_RS14780 -0.7 -3.3 cyanase compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in light_bubbling experiments