Experiment set2S509 for Synechocystis sp000284455 PCC 6803

Compare to:

no stress control

200 most important genes:

  gene name fitness t score description  
SGL_RS03520 -9.0 -6.2 ABC transporter permease compare
SGL_RS05385 -7.6 -5.3 DUF4040 domain-containing protein compare
SGL_RS05375 -7.2 -4.2 hypothetical protein compare
SGL_RS05390 -7.1 -6.9 Na(+)/H(+) antiporter subunit B compare
SGL_RS05380 -6.9 -4.0 monovalent cation/H(+) antiporter subunit G compare
SGL_RS03540 -6.8 -13.0 ABC transporter ATP-binding protein compare
SGL_RS08790 -6.2 -4.2 carbohydrate ABC transporter permease compare
SGL_RS06130 -6.2 -4.2 anti-sigma regulatory factor compare
SGL_RS03625 -6.0 -14.5 glycosyltransferase family 1 protein compare
SGL_RS02515 -6.0 -9.9 M56 family metallopeptidase compare
SGL_RS05370 -6.0 -2.1 Na+/H+ antiporter subunit E compare
SGL_RS16100 -5.9 -11.9 heavy metal translocating P-type ATPase compare
SGL_RS02460 -5.9 -5.8 phosphate signaling complex protein PhoU compare
SGL_RS03775 -5.9 -6.9 membrane protein compare
SGL_RS15045 -5.7 -12.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS06430 -5.7 -3.4 glycosyltransferase family 2 protein compare
SGL_RS12770 -5.6 -6.0 uroporphyrinogen-III C-methyltransferase compare
SGL_RS06675 -5.5 -6.2 ABC transporter ATP-binding protein compare
SGL_RS10775 -5.3 -10.2 DUF3326 domain-containing protein compare
SGL_RS03840 -5.3 -4.8 adenylyl-sulfate kinase compare
SGL_RS07200 -5.3 -6.3 LCP family protein compare
SGL_RS14430 -5.2 -7.9 cobalt ECF transporter T component CbiQ compare
SGL_RS14445 -5.2 -3.6 hypothetical protein compare
SGL_RS02665 -5.2 -4.2 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS05435 -5.2 -3.6 heavy metal translocating P-type ATPase compare
SGL_RS14425 -5.2 -5.0 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS13055 -5.2 -3.5 protein translocase subunit SecF compare
SGL_RS16545 -5.1 -12.2 LdpA C-terminal domain-containing domain compare
SGL_RS17650 -5.1 -3.5 hypothetical protein compare
SGL_RS05980 -5.1 -6.8 hypothetical protein compare
SGL_RS16940 -5.0 -4.5 dephospho-CoA kinase compare
SGL_RS04510 -5.0 -6.6 DUF561 domain-containing protein compare
SGL_RS08275 -5.0 -3.4 tetratricopeptide repeat protein compare
SGL_RS10305 -5.0 -8.3 PIN/TRAM domain-containing protein compare
SGL_RS03550 -5.0 -19.0 CDP-glucose 4,6-dehydratase compare
SGL_RS09385 -4.9 -4.7 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS17330 -4.9 -12.4 biosynthetic arginine decarboxylase compare
SGL_RS12870 -4.9 -5.0 YqeG family HAD IIIA-type phosphatase compare
SGL_RS17125 -4.9 -5.0 inositol monophosphatase family protein compare
SGL_RS14860 -4.9 -4.7 8-amino-7-oxononanoate synthase compare
SGL_RS02580 -4.8 -4.7 DUF1818 family protein compare
SGL_RS05470 -4.8 -4.7 dihydropteroate synthase compare
SGL_RS17470 -4.8 -7.2 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS13870 -4.6 -5.2 rRNA maturation RNase YbeY compare
SGL_RS11000 -4.6 -6.9 sulfate adenylyltransferase compare
SGL_RS15700 -4.6 -11.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS06020 -4.5 -8.5 sugar ABC transporter permease compare
SGL_RS05880 -4.5 -6.0 sugar ABC transporter substrate-binding protein compare
SGL_RS08175 -4.5 -6.1 serine hydrolase compare
SGL_RS18300 -4.5 -6.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS05560 -4.4 -5.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS12490 -4.3 -8.3 glutamate--cysteine ligase compare
SGL_RS17520 -4.3 -7.8 DUF3352 domain-containing protein compare
SGL_RS14435 -4.3 -2.1 cobalt transporter CbiM compare
SGL_RS14335 -4.3 -4.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS09720 -4.2 -5.0 beta-ketoacyl-ACP synthase compare
SGL_RS13910 -4.2 -5.4 phasin family protein compare
SGL_RS15425 -4.2 -11.9 cobalamin biosynthesis protein CobW compare
SGL_RS12545 -4.2 -4.7 GTPase Era compare
SGL_RS14905 -4.0 -6.9 30S ribosomal protein PSRP-3 compare
SGL_RS12575 -3.9 -4.5 riboflavin synthase compare
SGL_RS11510 -3.9 -5.7 dihydroneopterin aldolase compare
SGL_RS03970 -3.9 -5.2 thiamine phosphate synthase compare
SGL_RS03590 -3.9 -8.8 ATP-grasp domain-containing protein compare
SGL_RS03585 -3.9 -14.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS04720 -3.9 -3.7 iron uptake porin compare
SGL_RS03365 -3.8 -3.7 Ycf66 family protein compare
SGL_RS07605 -3.8 -5.4 HEAT repeat domain-containing protein compare
SGL_RS15530 -3.8 -4.6 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS05440 -3.8 -4.2 ACP S-malonyltransferase compare
SGL_RS08710 -3.7 -6.5 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS09160 -3.7 -3.7 thioredoxin family protein compare
SGL_RS03555 -3.7 -16.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03790 -3.6 -4.9 GTPase ObgE compare
SGL_RS09845 -3.6 -7.2 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS03425 -3.6 -3.4 precorrin-3B C(17)-methyltransferase compare
SGL_RS02220 -3.6 -5.7 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS06585 -3.6 -6.0 nitrate ABC transporter ATP-binding protein compare
SGL_RS12585 -3.6 -6.6 ABC transporter permease subunit compare
SGL_RS14540 -3.5 -4.2 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS15560 -3.5 -4.8 dethiobiotin synthase compare
SGL_RS03545 -3.5 -9.8 glucose-1-phosphate cytidylyltransferase compare
SGL_RS15620 -3.5 -5.1 cobyric acid synthase CobQ compare
SGL_RS03560 -3.5 -13.1 class I SAM-dependent methyltransferase compare
SGL_RS06440 -3.4 -6.4 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS12400 -3.4 -5.5 lysophospholipid acyltransferase family protein compare
SGL_RS10320 -3.4 -3.9 ribosome biogenesis GTPase Der compare
SGL_RS02145 -3.4 -13.9 metallophosphoesterase compare
SGL_RS12030 -3.4 -8.9 extracellular solute-binding protein compare
SGL_RS01905 -3.4 -17.3 GDP-mannose 4,6-dehydratase compare
SGL_RS08535 -3.3 -4.2 NIL domain-containing protein compare
SGL_RS15655 -3.3 -18.4 asparaginase compare
SGL_RS17685 -3.3 -13.9 ArsB/NhaD family transporter compare
SGL_RS07840 -3.3 -3.8 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS12920 -3.2 -3.8 hypothetical protein compare
SGL_RS14105 -3.2 -6.5 2-succinylbenzoate--CoA ligase compare
SGL_RS14920 -3.2 -5.4 cation:proton antiporter compare
SGL_RS16735 -3.1 -4.5 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS02375 -3.1 -12.4 DUF3086 domain-containing protein compare
SGL_RS17305 -3.1 -4.4 pyrroline-5-carboxylate reductase compare
SGL_RS17495 -3.0 -8.0 peptidoglycan editing factor PgeF compare
SGL_RS02260 -3.0 -4.4 HEAT repeat domain-containing protein compare
SGL_RS01900 -2.9 -9.7 GDP-L-fucose synthase compare
SGL_RS13535 -2.9 -2.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS03185 -2.9 -4.6 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS09395 -2.9 -3.8 aldo/keto reductase compare
SGL_RS16880 -2.9 -3.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS04775 -2.9 -5.8 alpha/beta hydrolase compare
SGL_RS04230 -2.9 -5.7 exonuclease subunit SbcC compare
SGL_RS10130 -2.9 -14.0 fatty acid desaturase compare
SGL_RS08495 -2.8 -13.8 DUF3370 domain-containing protein compare
SGL_RS03950 -2.8 -13.0 homocysteine biosynthesis protein compare
SGL_RS13555 -2.8 -7.3 aldehyde oxygenase (deformylating) compare
SGL_RS16360 -2.7 -6.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS19585 -2.7 -5.4 hypothetical protein compare
SGL_RS13855 -2.7 -9.3 hypothetical protein compare
SGL_RS03060 -2.6 -7.1 phosphoadenosine phosphosulfate reductase compare
SGL_RS09820 -2.6 -4.6 ribosome maturation factor RimM compare
SGL_RS14045 -2.6 -6.0 hypothetical protein compare
SGL_RS13510 -2.6 -6.5 transglycosylase domain-containing protein compare
SGL_RS12235 -2.6 -2.6 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS04735 -2.6 -6.9 hypothetical protein compare
SGL_RS13495 -2.6 -10.3 AarF/ABC1/UbiB kinase family protein compare
SGL_RS11305 -2.6 -8.5 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS15435 -2.5 -8.6 PD40 domain-containing protein compare
SGL_RS04490 -2.5 -2.8 2TM domain-containing protein compare
SGL_RS06590 -2.5 -8.0 nitrate ABC transporter permease compare
SGL_RS13370 -2.5 -5.1 exonuclease SbcCD subunit D compare
SGL_RS06595 -2.5 -6.8 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS16950 -2.5 -11.6 phosphoketolase compare
SGL_RS03250 -2.5 -8.7 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS16915 -2.4 -5.9 trigger factor compare
SGL_RS08765 -2.4 -4.1 2-phosphosulfolactate phosphatase family protein compare
SGL_RS08605 -2.4 -8.7 DUF3120 domain-containing protein compare
SGL_RS14505 -2.4 -9.1 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS16860 -2.4 -12.7 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS13900 -2.4 -15.1 AI-2E family transporter compare
SGL_RS08115 -2.3 -7.6 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS04155 -2.3 -4.1 reverse transcriptase domain-containing protein compare
SGL_RS05465 -2.3 -3.0 hypothetical protein compare
SGL_RS14585 -2.2 -3.6 TolB family protein compare
SGL_RS13550 -2.2 -3.5 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS15870 -2.2 -8.1 septum site-determining protein MinC compare
SGL_RS11135 -2.2 -2.4 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS14025 -2.1 -15.9 gamma-glutamyl-phosphate reductase compare
SGL_RS11760 -2.1 -11.2 radical SAM protein compare
SGL_RS18320 -2.1 -11.5 serine/threonine-protein kinase compare
SGL_RS14930 -2.1 -8.1 type I methionyl aminopeptidase compare
SGL_RS15865 -2.1 -4.9 septum site-determining protein MinD compare
SGL_RS06640 -2.1 -3.3 DUF4168 domain-containing protein compare
SGL_RS05240 -2.1 -4.8 phycobilisome linker polypeptide compare
SGL_RS11835 -2.0 -4.2 transcription antitermination factor NusB compare
SGL_RS18215 -2.0 -4.0 pentapeptide repeat-containing protein compare
SGL_RS07565 -2.0 -3.2 hypothetical protein compare
SGL_RS13905 -1.9 -8.8 hypothetical protein compare
SGL_RS04660 -1.9 -3.1 phycobilisome rod-core linker polypeptide compare
SGL_RS11025 -1.9 -7.5 oxidoreductase compare
SGL_RS12910 -1.9 -7.8 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS05235 -1.9 -5.8 phycobilisome linker polypeptide compare
SGL_RS09305 -1.9 -6.1 adenosyl-hopene transferase HpnH compare
SGL_RS18180 -1.8 -7.3 ABC transporter permease compare
SGL_RS05210 -1.8 -7.6 SLBB domain-containing protein compare
SGL_RS05320 -1.8 -8.4 PBP1A family penicillin-binding protein compare
SGL_RS06755 -1.8 -11.1 bacterioferritin-associated ferredoxin compare
SGL_RS03505 -1.8 -12.7 exopolysaccharide transport family protein compare
SGL_RS04525 -1.8 -2.9 photosynthesis system II assembly factor Ycf48 compare
SGL_RS12335 -1.7 -5.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03190 -1.7 -2.4 universal stress protein compare
SGL_RS16770 -1.7 -5.3 LptF/LptG family permease compare
SGL_RS09905 -1.7 -5.1 biotin/lipoate A/B protein ligase family protein compare
SGL_RS00825 -1.7 -6.0 hypothetical protein compare
SGL_RS06355 -1.7 -2.8 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS12755 -1.7 -8.3 IMS domain-containing protein compare
SGL_RS11675 -1.7 -5.1 chromophore lyase CpcT/CpeT compare
SGL_RS13685 -1.7 -8.9 ABC transporter ATP-binding protein compare
SGL_RS15710 -1.7 -13.9 HD family phosphohydrolase compare
SGL_RS17405 -1.7 -7.4 L-2-hydroxyglutarate oxidase compare
SGL_RS13465 -1.7 -9.2 class II fumarate hydratase compare
SGL_RS19605 -1.6 -4.6 hypothetical protein compare
SGL_RS03380 -1.6 -8.1 sulfite reductase, ferredoxin dependent compare
SGL_RS07870 -1.6 -3.5 Ycf51 family protein compare
SGL_RS03635 -1.6 -5.4 glycosyltransferase family 4 protein compare
SGL_RS00830 -1.6 -4.1 hypothetical protein compare
SGL_RS10480 -1.6 -9.7 metallophosphoesterase family protein compare
SGL_RS07130 -1.6 -9.2 AAA-like domain-containing protein compare
SGL_RS11495 -1.6 -1.7 Ig-like domain-containing protein compare
SGL_RS03265 -1.6 -2.4 photosystem II complex extrinsic protein PsbU compare
SGL_RS03670 -1.6 -8.4 glycosyltransferase compare
SGL_RS05355 -1.5 -10.4 cation:proton antiporter compare
SGL_RS03745 -1.5 -11.4 glycosyltransferase family 4 protein compare
SGL_RS02095 -1.5 -5.7 dTDP-4-dehydrorhamnose reductase compare
SGL_RS17810 -1.5 -10.9 iron uptake porin compare
SGL_RS15370 -1.5 -3.9 DnaJ C-terminal domain-containing protein compare
SGL_RS02955 -1.5 -2.7 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS12985 -1.5 -3.8 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
SGL_RS06110 -1.5 -4.3 glycosyltransferase family 4 protein compare
SGL_RS06600 -1.5 -8.5 anthranilate phosphoribosyltransferase family protein compare
SGL_RS03275 -1.5 -9.3 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS03630 -1.5 -4.4 glycosyltransferase family 2 protein compare
SGL_RS03740 -1.5 -7.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in no stress control experiments