Experiment set2S503 for Synechocystis sp000284455 PCC 6803

Compare to:

high light; bubbling

200 most detrimental genes:

  gene name fitness t score description  
SGL_RS18350 +11.1 54.0 translation elongation factor 4 compare
SGL_RS02570 +10.6 80.4 amino acid ABC transporter substrate-binding protein compare
SGL_RS14485 +10.5 63.9 transcription-repair coupling factor compare
SGL_RS14200 +9.9 31.2 phosphate ABC transporter substrate-binding protein PstS compare
SGL_RS13255 +9.9 41.2 DUF3318 domain-containing protein compare
SGL_RS08160 +9.8 23.3 hypothetical protein compare
SGL_RS02825 +9.6 71.7 translational GTPase TypA compare
SGL_RS16915 +9.3 24.9 trigger factor compare
SGL_RS02785 +8.9 39.5 CRR6 family NdhI maturation factor compare
SGL_RS08155 +8.9 14.4 Spy/CpxP family protein refolding chaperone compare
SGL_RS02000 +8.6 27.8 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS18050 +8.5 39.1 tRNA pseudouridine(55) synthase TruB compare
SGL_RS09635 +8.5 73.8 TldD/PmbA family protein compare
SGL_RS14750 +8.5 69.0 TldD/PmbA family protein compare
SGL_RS05655 +8.2 33.8 TPM domain-containing protein compare
SGL_RS14180 +8.1 51.4 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS01995 +8.0 18.8 biopolymer transporter ExbD compare
SGL_RS08975 +7.9 47.4 redox-regulated ATPase YchF compare
SGL_RS02155 +7.5 34.9 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB compare
SGL_RS02260 +7.5 18.4 HEAT repeat domain-containing protein compare
SGL_RS14195 +7.4 25.8 phosphate ABC transporter permease subunit PstC compare
SGL_RS18770 +7.4 32.0 photosystem II reaction center protein PsbN compare
SGL_RS10445 +7.4 26.4 L-threonylcarbamoyladenylate synthase compare
SGL_RS14185 +7.3 32.2 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS01990 +7.3 50.1 TonB-dependent siderophore receptor compare
SGL_RS06700 +7.3 36.1 peptide chain release factor 3 compare
SGL_RS11800 +7.2 67.4 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase compare
SGL_RS09815 +7.2 54.3 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD compare
SGL_RS02550 +7.1 30.7 agmatinase compare
SGL_RS03305 +7.1 23.8 CO2 hydration protein compare
SGL_RS14190 +7.1 36.9 phosphate ABC transporter permease PstA compare
SGL_RS18225 +7.1 25.8 cofactor assembly of complex C subunit B compare
SGL_RS07605 +7.1 32.7 HEAT repeat domain-containing protein compare
SGL_RS03360 +7.0 6.9 50S ribosomal protein L28 compare
SGL_RS14025 +7.0 35.5 gamma-glutamyl-phosphate reductase compare
SGL_RS08025 +7.0 4.6 tetratricopeptide repeat protein compare
SGL_RS14895 +6.8 28.6 DUF2811 domain-containing protein compare
SGL_RS09850 +6.7 16.9 Gfo/Idh/MocA family oxidoreductase compare
SGL_RS11950 +6.7 36.9 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
SGL_RS04490 +6.4 21.0 2TM domain-containing protein compare
SGL_RS10150 +6.3 21.9 50S ribosomal protein L9 compare
SGL_RS07800 +6.1 1.7 photosystem II protein Y compare
SGL_RS06355 +6.0 13.1 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS16595 +5.9 41.2 NAD(P)H-quinone oxidoreductase subunit F compare
SGL_RS16590 +5.9 33.2 NADH-quinone oxidoreductase subunit M compare
SGL_RS14660 +5.9 15.5 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
SGL_RS02345 +5.8 3.1 type II toxin-antitoxin system PrlF family antitoxin compare
SGL_RS05725 +5.8 3.8 tRNA pseudouridine(38-40) synthase TruA compare
SGL_RS04660 +5.7 3.5 phycobilisome rod-core linker polypeptide compare
SGL_RS03965 +5.7 34.0 R3H domain-containing nucleic acid-binding protein compare
SGL_RS09640 +5.6 42.9 peptide chain release factor N(5)-glutamine methyltransferase compare
SGL_RS14575 +5.6 10.9 RNA-binding protein compare
SGL_RS14495 +5.6 22.8 septal ring lytic transglycosylase RlpA family protein compare
SGL_RS18710 +5.4 7.0 DUF3155 domain-containing protein compare
SGL_RS18030 +5.4 26.6 SRPBCC family protein compare
SGL_RS11435 +5.4 9.5 Mini-ribonuclease 3 compare
SGL_RS11460 +5.3 28.9 type II CAAX endopeptidase family protein compare
SGL_RS03775 +5.3 17.9 membrane protein compare
SGL_RS01515 +5.3 34.5 hypothetical protein compare
SGL_RS15710 +5.2 26.5 HD family phosphohydrolase compare
SGL_RS13455 +5.1 15.5 RDD family protein compare
SGL_RS04735 +5.0 14.0 hypothetical protein compare
SGL_RS07600 +4.9 28.5 fumarylacetoacetate hydrolase family protein compare
SGL_RS14905 +4.9 15.6 30S ribosomal protein PSRP-3 compare
SGL_RS06140 +4.7 28.2 threonine ammonia-lyase, biosynthetic compare
SGL_RS10520 +4.7 17.1 J domain-containing protein compare
SGL_RS08610 +4.7 14.1 adenylate/guanylate cyclase domain-containing protein compare
SGL_RS05270 +4.6 24.7 serine/threonine-protein kinase compare
SGL_RS20075 +4.5 12.7 type II secretion system F family protein compare
SGL_RS03300 +4.4 23.2 pilus motility taxis protein HmpF compare
SGL_RS06030 +4.4 4.5 HhoA/HhoB/HtrA family serine endopeptidase compare
SGL_RS05445 +4.4 13.7 response regulator compare
SGL_RS10280 +4.4 13.3 hypothetical protein compare
SGL_RS13950 +4.4 28.9 GspE/PulE family protein compare
SGL_RS13940 +4.3 27.4 molecular chaperone DnaK compare
SGL_RS15240 +4.2 22.4 Hpt domain-containing protein compare
SGL_RS12235 +4.2 9.0 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS03475 +4.2 21.8 tRNA dihydrouridine(20/20a) synthase DusA compare
SGL_RS09380 +4.2 5.8 hypothetical protein compare
SGL_RS17115 +4.2 15.8 DUF3370 domain-containing protein compare
SGL_RS04205 +4.1 13.1 chemotaxis protein CheW compare
SGL_RS04365 +4.1 24.5 HAD family hydrolase compare
SGL_RS04210 +4.0 21.2 methyl-accepting chemotaxis protein compare
SGL_RS11440 +4.0 22.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
SGL_RS10685 +4.0 20.2 type IV pilus assembly protein PilM compare
SGL_RS11920 +4.0 5.4 KH domain-containing protein compare
SGL_RS11580 +3.9 6.1 DUF760 domain-containing protein compare
SGL_RS16945 +3.9 17.3 DUF3854 domain-containing protein compare
SGL_RS12550 +3.9 14.1 hybrid sensor histidine kinase/response regulator compare
SGL_RS10605 +3.9 25.9 Crp/Fnr family transcriptional regulator compare
SGL_RS05235 +3.9 17.1 phycobilisome linker polypeptide compare
SGL_RS09990 +3.8 2.1 NAD(P)H-quinone oxidoreductase subunit N compare
SGL_RS04710 +3.8 6.9 GNAT family N-acetyltransferase compare
SGL_RS15750 +3.8 18.7 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
SGL_RS15320 +3.7 17.5 DEAD/DEAH box helicase compare
SGL_RS09790 +3.7 17.3 hypothetical protein compare
SGL_RS03240 +3.7 9.9 YggT family protein compare
SGL_RS15630 +3.7 21.1 2Fe-2S iron-sulfur cluster-binding protein compare
SGL_RS10690 +3.7 10.0 PilN domain-containing protein compare
SGL_RS08605 +3.6 11.5 DUF3120 domain-containing protein compare
SGL_RS19495 +3.6 10.6 hypothetical protein compare
SGL_RS07650 +3.6 13.1 aminoglycoside phosphotransferase family protein compare
SGL_RS03225 +3.5 12.8 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS14975 +3.5 6.8 translation initiation factor compare
SGL_RS09855 +3.4 5.1 slipin family protein compare
SGL_RS08210 +3.4 23.1 chromosomal replication initiator protein DnaA compare
SGL_RS04990 +3.4 16.1 class I SAM-dependent methyltransferase compare
SGL_RS05060 +3.4 5.1 hypothetical protein compare
SGL_RS11005 +3.4 13.9 glycosyltransferase compare
SGL_RS05455 +3.4 18.4 radical SAM family heme chaperone HemW compare
SGL_RS09390 +3.3 15.6 pentapeptide repeat-containing protein compare
SGL_RS12865 +3.3 11.9 pseudouridine synthase compare
SGL_RS05020 +3.3 19.9 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
SGL_RS13770 +3.3 4.7 DUF3082 domain-containing protein compare
SGL_RS06255 +3.2 8.9 Tic20 family protein compare
SGL_RS14045 +3.2 8.6 hypothetical protein compare
SGL_RS10695 +3.1 7.0 pilus assembly protein compare
SGL_RS06660 +3.1 11.2 DNA helicase PcrA compare
SGL_RS02060 +3.1 7.7 DUF433 domain-containing protein compare
SGL_RS01825 +3.1 5.4 type II toxin-antitoxin system HigB family toxin compare
SGL_RS07180 +3.0 8.0 carboxynorspermidine decarboxylase compare
SGL_RS07495 +3.0 18.1 GH116 family glycosyl hydrolase compare
SGL_RS02380 +3.0 18.8 cysteine desulfurase family protein compare
SGL_RS07540 +3.0 14.6 endonuclease MutS2 compare
SGL_RS10700 +2.9 11.4 type IV pilus secretin PilQ compare
SGL_RS03950 +2.9 16.4 homocysteine biosynthesis protein compare
SGL_RS16540 +2.8 16.3 carotene isomerase compare
SGL_RS09925 +2.7 13.3 apolipoprotein N-acyltransferase compare
SGL_RS03745 +2.7 15.7 glycosyltransferase family 4 protein compare
SGL_RS11910 +2.7 13.5 hemolysin family protein compare
SGL_RS00445 +2.7 5.4 type II toxin-antitoxin system prevent-host-death family antitoxin compare
SGL_RS10080 +2.7 16.8 photosystem II S4 domain protein compare
SGL_RS02235 +2.7 9.9 efflux RND transporter periplasmic adaptor subunit compare
SGL_RS03955 +2.7 12.1 bifunctional oligoribonuclease/PAP phosphatase NrnA compare
SGL_RS13915 +2.7 6.9 tRNA-Ala compare
SGL_RS14340 +2.6 7.5 protein phosphatase 2C domain-containing protein compare
SGL_RS12210 +2.6 9.8 type IV pilus twitching motility protein PilT compare
SGL_RS17410 +2.6 7.6 tRNA-Val compare
SGL_RS11675 +2.5 8.2 chromophore lyase CpcT/CpeT compare
SGL_RS15695 +2.5 13.4 ammonium transporter compare
SGL_RS19580 +2.5 10.9 hypothetical protein compare
SGL_RS07105 +2.5 9.0 precorrin-6Y C5,15-methyltransferase subunit CbiT compare
SGL_RS07300 +2.5 7.6 site-2 protease family protein compare
SGL_RS04845 +2.5 15.4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
SGL_RS09260 +2.4 14.2 HhoA/HhoB/HtrA family serine endopeptidase compare
SGL_RS02145 +2.4 15.3 metallophosphoesterase compare
SGL_RS08575 +2.4 3.5 hypothetical protein compare
SGL_RS05640 +2.4 9.1 ABC transporter ATP-binding protein compare
SGL_RS08255 +2.4 7.2 ABC-F family ATP-binding cassette domain-containing protein compare
SGL_RS08315 +2.4 14.2 DNA mismatch repair protein MutS compare
SGL_RS02905 +2.3 12.5 Tab2/Atab2 family RNA-binding protein compare
SGL_RS01185 +2.3 1.8 hypothetical protein compare
SGL_RS14690 +2.3 8.8 HAMP domain-containing sensor histidine kinase compare
SGL_RS10340 +2.3 13.5 AGE family epimerase/isomerase compare
SGL_RS15595 +2.3 15.5 ABC transporter ATP-binding protein compare
SGL_RS12555 +2.2 4.7 alpha-mannosidase compare
SGL_RS08115 +2.2 7.0 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS03650 +2.2 2.1 FkbM family methyltransferase compare
SGL_RS09845 +2.2 7.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS05505 +2.2 11.5 TIGR03279 family radical SAM protein compare
SGL_RS09605 +2.2 13.1 efflux RND transporter permease subunit compare
SGL_RS17625 +2.1 8.8 EAL domain-containing protein compare
SGL_RS17900 +2.1 8.8 hypothetical protein compare
SGL_RS02730 +2.1 5.6 iron-sulfur cluster assembly accessory protein compare
SGL_RS11385 +2.1 8.5 ABC-F family ATP-binding cassette domain-containing protein compare
SGL_RS07865 +2.1 11.3 signal peptide peptidase SppA compare
SGL_RS17495 +2.1 9.5 peptidoglycan editing factor PgeF compare
SGL_RS20030 +2.1 4.4 iron uptake porin compare
SGL_RS12600 +2.1 3.7 DUF2062 domain-containing protein compare
SGL_RS07210 +2.1 4.1 hypothetical protein compare
SGL_RS13895 +2.0 5.3 PipX family protein compare
SGL_RS02985 +2.0 9.3 HhoA/HhoB/HtrA family serine endopeptidase compare
SGL_RS17100 +2.0 8.2 SWIM zinc finger family protein compare
SGL_RS08075 +2.0 4.7 peroxiredoxin compare
SGL_RS06610 +2.0 4.8 RlpA-like double-psi beta-barrel domain-containing protein compare
SGL_RS15215 +2.0 2.9 RrF2 family transcriptional regulator compare
SGL_RS05070 +2.0 1.7 2Fe-2S iron-sulfur cluster-binding protein compare
SGL_RS01470 +2.0 4.8 hypothetical protein compare
SGL_RS12360 +2.0 4.1 DUF3750 domain-containing protein compare
SGL_RS14390 +2.0 8.9 histidine phosphatase family protein compare
SGL_RS13585 +1.9 7.5 PAS domain S-box protein compare
SGL_RS02195 +1.9 2.4 nucleoside monophosphate kinase compare
SGL_RS01855 +1.9 4.4 AIPR family protein compare
SGL_RS12695 +1.9 1.9 tetratricopeptide repeat protein compare
SGL_RS17370 +1.9 2.1 hypothetical protein compare
SGL_RS08415 +1.9 2.1 4a-hydroxytetrahydrobiopterin dehydratase compare
SGL_RS05240 +1.9 4.9 phycobilisome linker polypeptide compare
SGL_RS00800 +1.9 3.1 putative addiction module antidote protein compare
SGL_RS03770 +1.9 9.0 succinate--CoA ligase subunit beta compare
SGL_RS17640 +1.9 11.0 family 10 glycosylhydrolase compare
SGL_RS08535 +1.9 2.4 NIL domain-containing protein compare
SGL_RS06380 +1.9 11.7 excinuclease ABC subunit UvrA compare
SGL_RS08265 +1.9 3.3 hypothetical protein compare
SGL_RS19755 +1.9 1.5 hypothetical protein compare
SGL_RS17180 +1.9 12.8 DEAD/DEAH box helicase compare
SGL_RS18650 +1.9 2.7 photosystem II reaction center protein PsbM compare
SGL_RS04080 +1.9 2.9 NnrU family protein compare
SGL_RS00655 +1.8 3.5 YlcI/YnfO family protein compare
SGL_RS12905 +1.8 7.0 PAS domain-containing sensor histidine kinase compare
SGL_RS15245 +1.8 5.0 iron-sulfur cluster biosynthesis transcriptional regulator SufR compare


Specific Phenotypes

For 29 genes in this experiment