Experiment set2S501 for Synechocystis sp000284455 PCC 6803

Compare to:

low light; bubbling

200 most important genes:

  gene name fitness t score description  
SGL_RS15130 -10.2 -6.7 dTDP-glucose 4,6-dehydratase compare
SGL_RS03640 -10.1 -5.8 UDP-glucose 4-epimerase GalE compare
SGL_RS03625 -10.0 -4.1 glycosyltransferase family 1 protein compare
SGL_RS00245 -10.0 -9.8 glycosyltransferase compare
SGL_RS03555 -10.0 -6.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03590 -9.9 -5.2 ATP-grasp domain-containing protein compare
SGL_RS03670 -9.8 -4.3 glycosyltransferase compare
SGL_RS03550 -9.8 -6.8 CDP-glucose 4,6-dehydratase compare
SGL_RS15840 -9.4 -6.5 class A beta-lactamase compare
SGL_RS16670 -9.4 -6.5 DUF5942 domain-containing protein compare
SGL_RS00190 -9.3 -8.8 sulfotransferase compare
SGL_RS03585 -9.3 -5.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS13560 -9.3 -9.1 glucose-1-phosphate thymidylyltransferase compare
SGL_RS00195 -9.2 -6.3 glycosyltransferase family 2 protein compare
SGL_RS03655 -9.1 -4.8 glycosyltransferase family 2 protein compare
SGL_RS13465 -9.1 -6.3 class II fumarate hydratase compare
SGL_RS03545 -8.8 -3.5 glucose-1-phosphate cytidylyltransferase compare
SGL_RS03560 -8.8 -6.1 class I SAM-dependent methyltransferase compare
SGL_RS17860 -8.8 -3.5 Holliday junction resolvase RuvX compare
SGL_RS06750 -8.5 -7.4 DUF192 domain-containing protein compare
SGL_RS04650 -8.5 -10.1 tetratricopeptide repeat protein compare
SGL_RS00225 -8.4 -18.9 glycosyltransferase compare
SGL_RS03000 -8.3 -4.3 spore maturation protein compare
SGL_RS03540 -8.3 -5.7 ABC transporter ATP-binding protein compare
SGL_RS06780 -8.3 -3.9 hypothetical protein compare
SGL_RS11760 -8.3 -5.7 radical SAM protein compare
SGL_RS03505 -8.3 -11.4 exopolysaccharide transport family protein compare
SGL_RS04775 -8.2 -3.8 alpha/beta hydrolase compare
SGL_RS00220 -8.2 -19.1 oligosaccharide flippase family protein compare
SGL_RS17740 -8.0 -5.6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
SGL_RS19460 -8.0 -3.2 hypothetical protein compare
SGL_RS10790 -8.0 -3.1 DUF4359 domain-containing protein compare
SGL_RS17230 -7.9 -5.2 L-aspartate oxidase compare
SGL_RS10480 -7.9 -11.7 metallophosphoesterase family protein compare
SGL_RS16770 -7.7 -4.3 LptF/LptG family permease compare
SGL_RS06775 -7.7 -3.0 type II toxin-antitoxin system PemK/MazF family toxin compare
SGL_RS17405 -7.7 -5.3 L-2-hydroxyglutarate oxidase compare
SGL_RS14930 -7.6 -5.2 type I methionyl aminopeptidase compare
SGL_RS03275 -7.6 -5.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS02095 -7.5 -4.6 dTDP-4-dehydrorhamnose reductase compare
SGL_RS03520 -7.4 -3.9 ABC transporter permease compare
SGL_RS00255 -7.4 -17.6 glycosyltransferase family 2 protein compare
SGL_RS18320 -7.3 -5.0 serine/threonine-protein kinase compare
SGL_RS07285 -7.2 -10.6 N-acetylmuramoyl-L-alanine amidase compare
SGL_RS03605 -7.2 -9.3 cephalosporin hydroxylase family protein compare
SGL_RS03845 -7.2 -4.8 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS02375 -7.2 -8.1 DUF3086 domain-containing protein compare
SGL_RS12870 -7.0 -3.7 YqeG family HAD IIIA-type phosphatase compare
SGL_RS15835 -7.0 -15.5 TrmJ/YjtD family RNA methyltransferase compare
SGL_RS17125 -6.9 -3.7 inositol monophosphatase family protein compare
SGL_RS10775 -6.9 -6.1 DUF3326 domain-containing protein compare
SGL_RS17330 -6.9 -4.8 biosynthetic arginine decarboxylase compare
SGL_RS02145 -6.8 -4.7 metallophosphoesterase compare
SGL_RS15425 -6.8 -4.7 cobalamin biosynthesis protein CobW compare
SGL_RS16860 -6.8 -4.7 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS08080 -6.8 -3.5 Fur family transcriptional regulator compare
SGL_RS03685 -6.8 -8.8 glycosyltransferase compare
SGL_RS03630 -6.8 -3.6 glycosyltransferase family 2 protein compare
SGL_RS03850 -6.7 -3.8 biopolymer transporter ExbD compare
SGL_RS13370 -6.7 -3.1 exonuclease SbcCD subunit D compare
SGL_RS05210 -6.7 -6.5 SLBB domain-containing protein compare
SGL_RS03060 -6.7 -4.1 phosphoadenosine phosphosulfate reductase compare
SGL_RS09430 -6.6 -16.4 leucyl aminopeptidase compare
SGL_RS02305 -6.6 -9.2 NAD-dependent malic enzyme compare
SGL_RS03365 -6.6 -3.1 Ycf66 family protein compare
SGL_RS09820 -6.5 -2.7 ribosome maturation factor RimM compare
SGL_RS16705 -6.5 -4.0 diadenylate cyclase CdaA compare
SGL_RS03005 -6.5 -2.2 nucleoside recognition domain-containing protein compare
SGL_RS12755 -6.5 -12.4 IMS domain-containing protein compare
SGL_RS18270 -6.4 -3.3 family 10 glycosylhydrolase compare
SGL_RS02460 -6.4 -3.3 phosphate signaling complex protein PhoU compare
SGL_RS14560 -6.4 -7.4 hypothetical protein compare
SGL_RS13695 -6.3 -8.8 SIMPL domain-containing protein compare
SGL_RS11325 -6.1 -4.2 pitrilysin family protein compare
SGL_RS12235 -6.1 -2.9 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS03635 -6.1 -2.7 glycosyltransferase family 4 protein compare
SGL_RS16730 -6.1 -7.6 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
SGL_RS13005 -6.0 -11.7 cysteine desulfurase family protein compare
SGL_RS12490 -6.0 -4.2 glutamate--cysteine ligase compare
SGL_RS06130 -6.0 -3.5 anti-sigma regulatory factor compare
SGL_RS04390 -6.0 -2.4 DUF433 domain-containing protein compare
SGL_RS01900 -6.0 -6.3 GDP-L-fucose synthase compare
SGL_RS04335 -6.0 -4.7 GNAT family N-acetyltransferase compare
SGL_RS07675 -6.0 -3.3 HpsJ family protein compare
SGL_RS13495 -5.9 -10.5 AarF/ABC1/UbiB kinase family protein compare
SGL_RS16690 -5.9 -3.7 adenosine kinase compare
SGL_RS12335 -5.9 -5.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS16880 -5.8 -2.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS11395 -5.8 -7.3 TlyA family RNA methyltransferase compare
SGL_RS10160 -5.7 -5.6 B12-binding domain-containing radical SAM protein compare
SGL_RS11305 -5.7 -3.9 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS13510 -5.7 -5.6 transglycosylase domain-containing protein compare
SGL_RS14430 -5.7 -3.9 cobalt ECF transporter T component CbiQ compare
SGL_RS02850 -5.6 -5.0 uracil phosphoribosyltransferase compare
SGL_RS03675 -5.6 -1.8 hypothetical protein compare
SGL_RS18100 -5.6 -1.9 SH3 domain-containing protein compare
SGL_RS04025 -5.6 -6.8 proton extrusion protein PcxA compare
SGL_RS03460 -5.6 -9.9 hypothetical protein compare
SGL_RS07200 -5.6 -3.8 LCP family protein compare
SGL_RS14540 -5.6 -2.2 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS03085 -5.5 -1.7 DUF2862 domain-containing protein compare
SGL_RS14505 -5.5 -6.0 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS14425 -5.5 -3.4 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS17650 -5.5 -2.9 hypothetical protein compare
SGL_RS02665 -5.5 -2.2 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS16100 -5.5 -5.4 heavy metal translocating P-type ATPase compare
SGL_RS18180 -5.5 -4.8 ABC transporter permease compare
SGL_RS05465 -5.4 -2.9 hypothetical protein compare
SGL_RS11025 -5.4 -6.3 oxidoreductase compare
SGL_RS03840 -5.4 -2.5 adenylyl-sulfate kinase compare
SGL_RS09295 -5.3 -13.3 alpha/beta hydrolase compare
SGL_RS16940 -5.3 -2.5 dephospho-CoA kinase compare
SGL_RS09715 -5.3 -10.7 pitrilysin family protein compare
SGL_RS13870 -5.3 -3.5 rRNA maturation RNase YbeY compare
SGL_RS13685 -5.3 -11.0 ABC transporter ATP-binding protein compare
SGL_RS13490 -5.2 -7.1 aspartate aminotransferase compare
SGL_RS08875 -5.2 -4.3 potassium-transporting ATPase subunit F compare
SGL_RS11000 -5.2 -3.6 sulfate adenylyltransferase compare
SGL_RS11510 -5.2 -3.7 dihydroneopterin aldolase compare
SGL_RS07840 -5.1 -2.7 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS02840 -5.1 -2.3 MBL fold metallo-hydrolase compare
SGL_RS06340 -5.1 -8.7 response regulator transcription factor compare
SGL_RS04230 -5.1 -3.1 exonuclease subunit SbcC compare
SGL_RS10245 -5.1 -6.4 glycoside hydrolase family protein compare
SGL_RS12770 -5.1 -2.9 uroporphyrinogen-III C-methyltransferase compare
SGL_RS12575 -5.1 -3.3 riboflavin synthase compare
SGL_RS15060 -5.1 -8.9 PstS family phosphate ABC transporter substrate-binding protein compare
SGL_RS06430 -5.0 -2.0 glycosyltransferase family 2 protein compare
SGL_RS17735 -5.0 -10.0 hypothetical protein compare
SGL_RS08865 -4.9 -18.4 potassium-transporting ATPase subunit KdpA compare
SGL_RS14565 -4.9 -17.1 SpoIID/LytB domain-containing protein compare
SGL_RS15925 -4.9 -11.1 ATP-binding protein compare
SGL_RS12660 -4.9 -11.4 DNA double-strand break repair nuclease NurA compare
SGL_RS17520 -4.9 -3.4 DUF3352 domain-containing protein compare
SGL_RS10305 -4.9 -4.6 PIN/TRAM domain-containing protein compare
SGL_RS17305 -4.9 -3.4 pyrroline-5-carboxylate reductase compare
SGL_RS16840 -4.9 -4.8 TMEM165/GDT1 family protein compare
SGL_RS05980 -4.9 -3.3 hypothetical protein compare
SGL_RS14445 -4.8 -3.1 hypothetical protein compare
SGL_RS12340 -4.8 -9.8 hypothetical protein compare
SGL_RS08765 -4.8 -2.2 2-phosphosulfolactate phosphatase family protein compare
SGL_RS07170 -4.8 -1.9 glycine cleavage system protein GcvH compare
SGL_RS08095 -4.8 -11.3 peptide ABC transporter substrate-binding protein compare
SGL_RS05560 -4.8 -5.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS04360 -4.8 -7.5 5-formyltetrahydrofolate cyclo-ligase compare
SGL_RS08855 -4.7 -10.1 response regulator transcription factor compare
SGL_RS14920 -4.7 -2.7 cation:proton antiporter compare
SGL_RS08870 -4.7 -19.2 potassium-transporting ATPase subunit KdpB compare
SGL_RS15045 -4.7 -9.3 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS14300 -4.7 -17.2 HAMP domain-containing sensor histidine kinase compare
SGL_RS11605 -4.7 -6.4 glycosyltransferase compare
SGL_RS13555 -4.7 -3.0 aldehyde oxygenase (deformylating) compare
SGL_RS18365 -4.7 -12.4 glycosyltransferase family 9 protein compare
SGL_RS16695 -4.7 -11.4 magnesium/cobalt transporter CorA compare
SGL_RS05500 -4.6 -11.6 ribonuclease R compare
SGL_RS12930 -4.6 -2.1 DUF1257 domain-containing protein compare
SGL_RS07870 -4.5 -2.6 Ycf51 family protein compare
SGL_RS08880 -4.5 -11.1 K(+)-transporting ATPase subunit C compare
SGL_RS14435 -4.5 -1.5 cobalt transporter CbiM compare
SGL_RS03790 -4.5 -3.1 GTPase ObgE compare
SGL_RS09395 -4.5 -3.1 aldo/keto reductase compare
SGL_RS12400 -4.5 -3.1 lysophospholipid acyltransferase family protein compare
SGL_RS02580 -4.5 -2.9 DUF1818 family protein compare
SGL_RS06635 -4.4 -2.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
SGL_RS10320 -4.4 -2.5 ribosome biogenesis GTPase Der compare
SGL_RS15530 -4.4 -2.7 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS17110 -4.4 -4.8 hypothetical protein compare
SGL_RS14830 -4.3 -9.2 FkbM family methyltransferase compare
SGL_RS14835 -4.3 -11.8 FkbM family methyltransferase compare
SGL_RS13805 -4.3 -4.4 saccharopine dehydrogenase family protein compare
SGL_RS16360 -4.3 -3.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS12545 -4.3 -2.0 GTPase Era compare
SGL_RS13055 -4.3 -2.6 protein translocase subunit SecF compare
SGL_RS03250 -4.3 -4.6 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS02475 -4.2 -1.3 YlxR family protein compare
SGL_RS13900 -4.2 -9.1 AI-2E family transporter compare
SGL_RS02740 -4.2 -4.5 HAS-barrel domain-containing protein compare
SGL_RS03185 -4.2 -2.9 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS01905 -4.2 -12.8 GDP-mannose 4,6-dehydratase compare
SGL_RS17470 -4.2 -4.9 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS15560 -4.2 -2.7 dethiobiotin synthase compare
SGL_RS11135 -4.1 -1.4 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS15545 -4.1 -14.6 FAD-dependent oxidoreductase compare
SGL_RS02220 -4.1 -2.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS11955 -4.1 -2.8 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS19585 -4.1 -2.7 hypothetical protein compare
SGL_RS15435 -4.0 -9.7 PD40 domain-containing protein compare
SGL_RS11835 -4.0 -2.5 transcription antitermination factor NusB compare
SGL_RS10265 -4.0 -6.0 DUF928 domain-containing protein compare
SGL_RS14335 -4.0 -2.5 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS18300 -4.0 -3.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS07935 -3.9 -3.3 hypothetical protein compare
SGL_RS09385 -3.9 -2.2 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS18170 -3.9 -2.5 PspA/IM30 family protein compare
SGL_RS04995 -3.9 -1.5 hypothetical protein compare
SGL_RS07180 -3.9 -4.8 carboxynorspermidine decarboxylase compare
SGL_RS05440 -3.9 -2.2 ACP S-malonyltransferase compare
SGL_RS06585 -3.9 -4.1 nitrate ABC transporter ATP-binding protein compare
SGL_RS11040 -3.9 -7.0 TMEM165/GDT1 family protein compare
SGL_RS08275 -3.9 -2.6 tetratricopeptide repeat protein compare


Specific Phenotypes

For 7 genes in this experiment