Experiment set2S500 for Synechocystis sp000284455 PCC 6803

Compare to:

control for light_bubbling experiments

200 most important genes:

  gene name fitness t score description  
SGL_RS03625 -11.1 -5.9 glycosyltransferase family 1 protein compare
SGL_RS03555 -10.4 -10.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03550 -10.0 -13.7 CDP-glucose 4,6-dehydratase compare
SGL_RS03545 -9.9 -5.6 glucose-1-phosphate cytidylyltransferase compare
SGL_RS10775 -9.6 -6.6 DUF3326 domain-containing protein compare
SGL_RS04775 -9.3 -6.1 alpha/beta hydrolase compare
SGL_RS03560 -9.2 -8.9 class I SAM-dependent methyltransferase compare
SGL_RS03540 -8.8 -8.6 ABC transporter ATP-binding protein compare
SGL_RS04510 -8.7 -6.0 DUF561 domain-containing protein compare
SGL_RS03585 -8.6 -9.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS03520 -8.5 -5.9 ABC transporter permease compare
SGL_RS15700 -8.2 -11.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS12870 -8.1 -5.6 YqeG family HAD IIIA-type phosphatase compare
SGL_RS02515 -8.0 -5.5 M56 family metallopeptidase compare
SGL_RS08495 -7.8 -7.6 DUF3370 domain-containing protein compare
SGL_RS10130 -7.8 -14.9 fatty acid desaturase compare
SGL_RS17125 -7.8 -5.4 inositol monophosphatase family protein compare
SGL_RS14905 -7.7 -5.1 30S ribosomal protein PSRP-3 compare
SGL_RS03590 -7.7 -6.7 ATP-grasp domain-containing protein compare
SGL_RS15425 -7.6 -5.3 cobalamin biosynthesis protein CobW compare
SGL_RS16545 -7.6 -13.7 LdpA C-terminal domain-containing domain compare
SGL_RS17330 -7.6 -7.4 biosynthetic arginine decarboxylase compare
SGL_RS06675 -7.3 -5.1 ABC transporter ATP-binding protein compare
SGL_RS02460 -7.2 -5.0 phosphate signaling complex protein PhoU compare
SGL_RS06440 -7.2 -8.3 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS15045 -7.2 -5.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS19585 -7.1 -3.5 hypothetical protein compare
SGL_RS02580 -7.1 -4.8 DUF1818 family protein compare
SGL_RS06130 -7.1 -4.9 anti-sigma regulatory factor compare
SGL_RS04390 -7.0 -3.9 DUF433 domain-containing protein compare
SGL_RS12490 -7.0 -4.8 glutamate--cysteine ligase compare
SGL_RS03775 -6.9 -4.8 membrane protein compare
SGL_RS02145 -6.9 -10.6 metallophosphoesterase compare
SGL_RS05880 -6.9 -4.8 sugar ABC transporter substrate-binding protein compare
SGL_RS06020 -6.8 -4.7 sugar ABC transporter permease compare
SGL_RS05375 -6.8 -5.1 hypothetical protein compare
SGL_RS15655 -6.7 -17.9 asparaginase compare
SGL_RS11305 -6.6 -4.6 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS05390 -6.6 -8.2 Na(+)/H(+) antiporter subunit B compare
SGL_RS14430 -6.6 -4.5 cobalt ECF transporter T component CbiQ compare
SGL_RS07200 -6.6 -4.5 LCP family protein compare
SGL_RS14425 -6.4 -4.4 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS14540 -6.4 -3.7 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS13910 -6.4 -4.9 phasin family protein compare
SGL_RS16100 -6.4 -4.4 heavy metal translocating P-type ATPase compare
SGL_RS17650 -6.4 -4.4 hypothetical protein compare
SGL_RS03840 -6.4 -4.4 adenylyl-sulfate kinase compare
SGL_RS15865 -6.4 -5.1 septum site-determining protein MinD compare
SGL_RS05380 -6.4 -3.8 monovalent cation/H(+) antiporter subunit G compare
SGL_RS05560 -6.4 -4.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS02665 -6.3 -3.7 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS09820 -6.3 -4.4 ribosome maturation factor RimM compare
SGL_RS13870 -6.3 -4.3 rRNA maturation RNase YbeY compare
SGL_RS07605 -6.2 -4.3 HEAT repeat domain-containing protein compare
SGL_RS11000 -6.2 -4.2 sulfate adenylyltransferase compare
SGL_RS16940 -6.1 -4.1 dephospho-CoA kinase compare
SGL_RS08790 -6.1 -4.1 carbohydrate ABC transporter permease compare
SGL_RS02260 -6.1 -4.2 HEAT repeat domain-containing protein compare
SGL_RS12770 -6.1 -4.2 uroporphyrinogen-III C-methyltransferase compare
SGL_RS05370 -6.0 -2.9 Na+/H+ antiporter subunit E compare
SGL_RS06430 -6.0 -3.5 glycosyltransferase family 2 protein compare
SGL_RS10305 -6.0 -9.8 PIN/TRAM domain-containing protein compare
SGL_RS12575 -6.0 -4.1 riboflavin synthase compare
SGL_RS02375 -5.9 -11.7 DUF3086 domain-containing protein compare
SGL_RS03365 -5.9 -6.3 Ycf66 family protein compare
SGL_RS17495 -5.9 -7.0 peptidoglycan editing factor PgeF compare
SGL_RS08765 -5.8 -3.9 2-phosphosulfolactate phosphatase family protein compare
SGL_RS14445 -5.7 -3.9 hypothetical protein compare
SGL_RS17520 -5.7 -3.9 DUF3352 domain-containing protein compare
SGL_RS13495 -5.7 -13.6 AarF/ABC1/UbiB kinase family protein compare
SGL_RS13510 -5.7 -11.1 transglycosylase domain-containing protein compare
SGL_RS16950 -5.7 -10.2 phosphoketolase compare
SGL_RS12920 -5.6 -3.7 hypothetical protein compare
SGL_RS17470 -5.6 -3.8 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS05980 -5.5 -5.3 hypothetical protein compare
SGL_RS03790 -5.5 -3.8 GTPase ObgE compare
SGL_RS13370 -5.5 -6.4 exonuclease SbcCD subunit D compare
SGL_RS09395 -5.5 -3.8 aldo/keto reductase compare
SGL_RS17405 -5.4 -6.4 L-2-hydroxyglutarate oxidase compare
SGL_RS16860 -5.4 -11.4 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS17305 -5.3 -5.2 pyrroline-5-carboxylate reductase compare
SGL_RS06585 -5.3 -5.1 nitrate ABC transporter ATP-binding protein compare
SGL_RS10320 -5.3 -3.6 ribosome biogenesis GTPase Der compare
SGL_RS09720 -5.3 -3.6 beta-ketoacyl-ACP synthase compare
SGL_RS13055 -5.2 -3.6 protein translocase subunit SecF compare
SGL_RS03185 -5.2 -3.6 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS11510 -5.2 -5.2 dihydroneopterin aldolase compare
SGL_RS14930 -5.2 -8.6 type I methionyl aminopeptidase compare
SGL_RS05385 -5.1 -10.5 DUF4040 domain-containing protein compare
SGL_RS14435 -5.1 -2.5 cobalt transporter CbiM compare
SGL_RS15530 -5.1 -3.5 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS16360 -5.1 -3.5 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS04360 -5.1 -14.0 5-formyltetrahydrofolate cyclo-ligase compare
SGL_RS07170 -5.1 -4.2 glycine cleavage system protein GcvH compare
SGL_RS06595 -5.1 -8.2 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS15870 -5.1 -9.4 septum site-determining protein MinC compare
SGL_RS18300 -5.1 -3.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS06800 -5.0 -23.5 glutathione synthase compare
SGL_RS12910 -5.0 -8.4 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS09845 -5.0 -8.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS12400 -5.0 -4.8 lysophospholipid acyltransferase family protein compare
SGL_RS07840 -5.0 -4.8 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS14860 -4.9 -4.8 8-amino-7-oxononanoate synthase compare
SGL_RS06590 -4.9 -8.1 nitrate ABC transporter permease compare
SGL_RS15560 -4.9 -3.4 dethiobiotin synthase compare
SGL_RS14335 -4.9 -3.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS09385 -4.9 -3.3 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS08275 -4.8 -3.3 tetratricopeptide repeat protein compare
SGL_RS05440 -4.8 -3.3 ACP S-malonyltransferase compare
SGL_RS11025 -4.8 -12.2 oxidoreductase compare
SGL_RS03970 -4.8 -3.3 thiamine phosphate synthase compare
SGL_RS12585 -4.8 -3.3 ABC transporter permease subunit compare
SGL_RS08175 -4.8 -3.3 serine hydrolase compare
SGL_RS14045 -4.8 -7.8 hypothetical protein compare
SGL_RS11955 -4.7 -5.5 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS08115 -4.6 -7.5 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS09160 -4.6 -1.8 thioredoxin family protein compare
SGL_RS12755 -4.6 -11.7 IMS domain-containing protein compare
SGL_RS03250 -4.6 -7.6 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS14105 -4.5 -3.1 2-succinylbenzoate--CoA ligase compare
SGL_RS16735 -4.5 -3.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS14920 -4.5 -5.2 cation:proton antiporter compare
SGL_RS09905 -4.5 -4.3 biotin/lipoate A/B protein ligase family protein compare
SGL_RS11760 -4.4 -10.8 radical SAM protein compare
SGL_RS08710 -4.4 -3.0 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS02220 -4.3 -5.1 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS12545 -4.3 -3.8 GTPase Era compare
SGL_RS12745 -4.3 -5.0 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS11835 -4.3 -5.0 transcription antitermination factor NusB compare
SGL_RS09305 -4.2 -10.3 adenosyl-hopene transferase HpnH compare
SGL_RS06600 -4.2 -12.6 anthranilate phosphoribosyltransferase family protein compare
SGL_RS13685 -4.2 -14.0 ABC transporter ATP-binding protein compare
SGL_RS13900 -4.2 -17.0 AI-2E family transporter compare
SGL_RS07935 -4.2 -4.9 hypothetical protein compare
SGL_RS13465 -4.2 -14.2 class II fumarate hydratase compare
SGL_RS18180 -4.2 -5.4 ABC transporter permease compare
SGL_RS18215 -4.1 -10.3 pentapeptide repeat-containing protein compare
SGL_RS08155 -4.1 -4.5 Spy/CpxP family protein refolding chaperone compare
SGL_RS16880 -4.1 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS00830 -4.1 -6.1 hypothetical protein compare
SGL_RS06355 -4.0 -5.3 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS18270 -4.0 -6.9 family 10 glycosylhydrolase compare
SGL_RS12540 -4.0 -13.1 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS05435 -3.9 -2.7 heavy metal translocating P-type ATPase compare
SGL_RS04720 -3.9 -2.7 iron uptake porin compare
SGL_RS03950 -3.8 -15.4 homocysteine biosynthesis protein compare
SGL_RS04735 -3.8 -5.1 hypothetical protein compare
SGL_RS04230 -3.8 -5.5 exonuclease subunit SbcC compare
SGL_RS03425 -3.8 -2.6 precorrin-3B C(17)-methyltransferase compare
SGL_RS05235 -3.8 -6.4 phycobilisome linker polypeptide compare
SGL_RS06780 -3.7 -8.1 hypothetical protein compare
SGL_RS03060 -3.7 -8.9 phosphoadenosine phosphosulfate reductase compare
SGL_RS03380 -3.7 -10.9 sulfite reductase, ferredoxin dependent compare
SGL_RS14585 -3.7 -3.8 TolB family protein compare
SGL_RS01905 -3.7 -16.2 GDP-mannose 4,6-dehydratase compare
SGL_RS16770 -3.7 -8.4 LptF/LptG family permease compare
SGL_RS11985 -3.6 -2.4 LysR family transcriptional regulator compare
SGL_RS15435 -3.6 -8.5 PD40 domain-containing protein compare
SGL_RS04490 -3.6 -3.3 2TM domain-containing protein compare
SGL_RS03670 -3.6 -13.5 glycosyltransferase compare
SGL_RS12030 -3.6 -8.0 extracellular solute-binding protein compare
SGL_RS14505 -3.6 -11.1 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS05470 -3.5 -5.9 dihydropteroate synthase compare
SGL_RS05465 -3.4 -5.3 hypothetical protein compare
SGL_RS14780 -3.4 -5.1 cyanase compare
SGL_RS16670 -3.4 -24.2 DUF5942 domain-containing protein compare
SGL_RS08605 -3.4 -6.5 DUF3120 domain-containing protein compare
SGL_RS15620 -3.3 -4.7 cobyric acid synthase CobQ compare
SGL_RS03630 -3.3 -7.4 glycosyltransferase family 2 protein compare
SGL_RS14190 -3.3 -16.4 phosphate ABC transporter permease PstA compare
SGL_RS12925 -3.3 -8.7 AAA family ATPase compare
SGL_RS13855 -3.3 -8.4 hypothetical protein compare
SGL_RS18320 -3.2 -15.4 serine/threonine-protein kinase compare
SGL_RS03420 -3.2 -9.5 UbiD family decarboxylase compare
SGL_RS13550 -3.2 -3.0 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS00825 -3.2 -10.6 hypothetical protein compare
SGL_RS11135 -3.2 -3.4 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS14185 -3.1 -12.3 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS02955 -3.1 -6.7 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS01900 -3.1 -10.4 GDP-L-fucose synthase compare
SGL_RS04660 -3.1 -5.4 phycobilisome rod-core linker polypeptide compare
SGL_RS05240 -3.1 -4.4 phycobilisome linker polypeptide compare
SGL_RS04525 -3.1 -4.9 photosynthesis system II assembly factor Ycf48 compare
SGL_RS12930 -3.1 -2.9 DUF1257 domain-containing protein compare
SGL_RS13905 -3.0 -5.1 hypothetical protein compare
SGL_RS03640 -3.0 -8.4 UDP-glucose 4-epimerase GalE compare
SGL_RS07565 -3.0 -3.9 hypothetical protein compare
SGL_RS06755 -3.0 -11.4 bacterioferritin-associated ferredoxin compare
SGL_RS13770 -3.0 -2.7 DUF3082 domain-containing protein compare
SGL_RS11945 -3.0 -12.6 sirohydrochlorin chelatase compare
SGL_RS18170 -3.0 -5.3 PspA/IM30 family protein compare
SGL_RS03870 -2.9 -17.8 histidinol dehydrogenase compare
SGL_RS14025 -2.9 -14.6 gamma-glutamyl-phosphate reductase compare
SGL_RS08535 -2.9 -3.8 NIL domain-containing protein compare
SGL_RS06775 -2.9 -5.8 type II toxin-antitoxin system PemK/MazF family toxin compare
SGL_RS02795 -2.9 -9.2 flavin prenyltransferase UbiX compare
SGL_RS07870 -2.8 -4.1 Ycf51 family protein compare
SGL_RS16865 -2.8 -6.0 sulfurtransferase TusA family protein compare
SGL_RS14195 -2.7 -6.8 phosphate ABC transporter permease subunit PstC compare
SGL_RS09640 -2.7 -16.8 peptide chain release factor N(5)-glutamine methyltransferase compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in light_bubbling experiments