Experiment set2S495 for Synechocystis sp000284455 PCC 6803

Compare to:

control for light_bubbling experiments

200 most important genes:

  gene name fitness t score description  
SGL_RS07200 -6.4 -4.4 LCP family protein compare
SGL_RS06675 -5.4 -8.2 ABC transporter ATP-binding protein compare
SGL_RS05880 -5.4 -6.3 sugar ABC transporter substrate-binding protein compare
SGL_RS03185 -5.0 -3.4 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS03520 -4.5 -6.3 ABC transporter permease compare
SGL_RS02515 -4.4 -7.0 M56 family metallopeptidase compare
SGL_RS06020 -4.1 -7.9 sugar ABC transporter permease compare
SGL_RS12490 -4.1 -7.3 glutamate--cysteine ligase compare
SGL_RS05560 -4.0 -8.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS03540 -4.0 -8.7 ABC transporter ATP-binding protein compare
SGL_RS14425 -3.9 -5.4 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS17520 -3.9 -8.7 DUF3352 domain-containing protein compare
SGL_RS06430 -3.8 -3.6 glycosyltransferase family 2 protein compare
SGL_RS08790 -3.8 -5.1 carbohydrate ABC transporter permease compare
SGL_RS05435 -3.7 -2.5 heavy metal translocating P-type ATPase compare
SGL_RS12770 -3.7 -5.2 uroporphyrinogen-III C-methyltransferase compare
SGL_RS12870 -3.6 -6.4 YqeG family HAD IIIA-type phosphatase compare
SGL_RS12400 -3.6 -6.9 lysophospholipid acyltransferase family protein compare
SGL_RS16100 -3.5 -13.4 heavy metal translocating P-type ATPase compare
SGL_RS13870 -3.4 -6.8 rRNA maturation RNase YbeY compare
SGL_RS14430 -3.4 -8.5 cobalt ECF transporter T component CbiQ compare
SGL_RS03840 -3.4 -4.2 adenylyl-sulfate kinase compare
SGL_RS17650 -3.4 -5.4 hypothetical protein compare
SGL_RS14435 -3.3 -3.4 cobalt transporter CbiM compare
SGL_RS17495 -3.3 -6.4 peptidoglycan editing factor PgeF compare
SGL_RS05440 -3.3 -4.3 ACP S-malonyltransferase compare
SGL_RS03790 -3.3 -4.9 GTPase ObgE compare
SGL_RS03365 -3.2 -5.2 Ycf66 family protein compare
SGL_RS09720 -3.2 -7.0 beta-ketoacyl-ACP synthase compare
SGL_RS11000 -3.1 -7.3 sulfate adenylyltransferase compare
SGL_RS15620 -3.1 -4.2 cobyric acid synthase CobQ compare
SGL_RS02580 -3.1 -3.4 DUF1818 family protein compare
SGL_RS12575 -3.1 -6.6 riboflavin synthase compare
SGL_RS09385 -3.1 -4.9 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS06130 -3.1 -5.2 anti-sigma regulatory factor compare
SGL_RS14445 -3.1 -7.8 hypothetical protein compare
SGL_RS18300 -3.0 -7.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS13055 -3.0 -3.5 protein translocase subunit SecF compare
SGL_RS03625 -2.9 -13.1 glycosyltransferase family 1 protein compare
SGL_RS08495 -2.9 -15.0 DUF3370 domain-containing protein compare
SGL_RS02220 -2.9 -6.1 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS12030 -2.9 -6.6 extracellular solute-binding protein compare
SGL_RS03775 -2.8 -8.1 membrane protein compare
SGL_RS17305 -2.7 -6.6 pyrroline-5-carboxylate reductase compare
SGL_RS07840 -2.7 -3.3 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS05370 -2.7 -3.8 Na+/H+ antiporter subunit E compare
SGL_RS03550 -2.7 -14.6 CDP-glucose 4,6-dehydratase compare
SGL_RS15425 -2.7 -8.8 cobalamin biosynthesis protein CobW compare
SGL_RS16735 -2.5 -3.9 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS04720 -2.5 -4.0 iron uptake porin compare
SGL_RS08275 -2.5 -4.9 tetratricopeptide repeat protein compare
SGL_RS10305 -2.5 -9.7 PIN/TRAM domain-containing protein compare
SGL_RS15560 -2.5 -3.9 dethiobiotin synthase compare
SGL_RS06355 -2.5 -5.1 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS12920 -2.4 -3.8 hypothetical protein compare
SGL_RS06595 -2.4 -7.6 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS18180 -2.3 -9.3 ABC transporter permease compare
SGL_RS15045 -2.3 -8.5 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS09395 -2.2 -6.0 aldo/keto reductase compare
SGL_RS14905 -2.2 -5.3 30S ribosomal protein PSRP-3 compare
SGL_RS05980 -2.2 -5.8 hypothetical protein compare
SGL_RS14335 -2.2 -3.7 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS03585 -2.2 -13.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS05375 -2.2 -3.6 hypothetical protein compare
SGL_RS12585 -2.1 -5.8 ABC transporter permease subunit compare
SGL_RS17125 -2.1 -5.4 inositol monophosphatase family protein compare
SGL_RS13510 -2.1 -7.7 transglycosylase domain-containing protein compare
SGL_RS07605 -2.1 -4.0 HEAT repeat domain-containing protein compare
SGL_RS02460 -2.1 -4.2 phosphate signaling complex protein PhoU compare
SGL_RS14860 -2.1 -5.2 8-amino-7-oxononanoate synthase compare
SGL_RS03560 -2.1 -9.4 class I SAM-dependent methyltransferase compare
SGL_RS03970 -2.1 -4.8 thiamine phosphate synthase compare
SGL_RS05470 -2.0 -4.6 dihydropteroate synthase compare
SGL_RS03425 -2.0 -3.3 precorrin-3B C(17)-methyltransferase compare
SGL_RS05385 -2.0 -9.9 DUF4040 domain-containing protein compare
SGL_RS03545 -2.0 -5.4 glucose-1-phosphate cytidylyltransferase compare
SGL_RS13535 -2.0 -3.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS06585 -2.0 -4.6 nitrate ABC transporter ATP-binding protein compare
SGL_RS06640 -1.9 -2.4 DUF4168 domain-containing protein compare
SGL_RS14540 -1.9 -3.0 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS09160 -1.9 -4.1 thioredoxin family protein compare
SGL_RS03555 -1.8 -12.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS19585 -1.8 -4.7 hypothetical protein compare
SGL_RS04735 -1.8 -4.5 hypothetical protein compare
SGL_RS13855 -1.8 -7.2 hypothetical protein compare
SGL_RS06590 -1.8 -4.5 nitrate ABC transporter permease compare
SGL_RS13370 -1.8 -3.9 exonuclease SbcCD subunit D compare
SGL_RS02260 -1.7 -2.7 HEAT repeat domain-containing protein compare
SGL_RS16915 -1.7 -5.5 trigger factor compare
SGL_RS11510 -1.7 -5.0 dihydroneopterin aldolase compare
SGL_RS06440 -1.7 -4.5 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS05380 -1.6 -2.5 monovalent cation/H(+) antiporter subunit G compare
SGL_RS08115 -1.6 -4.7 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS12930 -1.6 -3.0 DUF1257 domain-containing protein compare
SGL_RS07565 -1.6 -3.3 hypothetical protein compare
SGL_RS10775 -1.6 -6.6 DUF3326 domain-containing protein compare
SGL_RS03590 -1.6 -5.2 ATP-grasp domain-containing protein compare
SGL_RS03250 -1.6 -4.9 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS16940 -1.6 -2.6 dephospho-CoA kinase compare
SGL_RS16950 -1.6 -7.8 phosphoketolase compare
SGL_RS13550 -1.5 -2.0 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS13685 -1.5 -7.4 ABC transporter ATP-binding protein compare
SGL_RS13910 -1.5 -4.7 phasin family protein compare
SGL_RS00825 -1.5 -7.3 hypothetical protein compare
SGL_RS08605 -1.5 -4.5 DUF3120 domain-containing protein compare
SGL_RS07935 -1.5 -4.0 hypothetical protein compare
SGL_RS10130 -1.5 -9.8 fatty acid desaturase compare
SGL_RS16545 -1.5 -8.3 LdpA C-terminal domain-containing domain compare
SGL_RS02665 -1.5 -2.8 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS17470 -1.5 -5.1 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS01905 -1.5 -9.0 GDP-mannose 4,6-dehydratase compare
SGL_RS16360 -1.5 -4.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS05390 -1.5 -4.6 Na(+)/H(+) antiporter subunit B compare
SGL_RS04660 -1.5 -3.0 phycobilisome rod-core linker polypeptide compare
SGL_RS14105 -1.5 -3.5 2-succinylbenzoate--CoA ligase compare
SGL_RS08535 -1.4 -3.8 NIL domain-containing protein compare
SGL_RS17330 -1.4 -6.8 biosynthetic arginine decarboxylase compare
SGL_RS08765 -1.4 -2.4 2-phosphosulfolactate phosphatase family protein compare
SGL_RS11495 -1.4 -2.6 Ig-like domain-containing protein compare
SGL_RS12925 -1.4 -5.3 AAA family ATPase compare
SGL_RS11675 -1.4 -3.5 chromophore lyase CpcT/CpeT compare
SGL_RS14920 -1.4 -3.2 cation:proton antiporter compare
SGL_RS16880 -1.4 -3.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS08710 -1.4 -4.1 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS04230 -1.4 -4.5 exonuclease subunit SbcC compare
SGL_RS15530 -1.4 -1.9 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS08175 -1.3 -3.9 serine hydrolase compare
SGL_RS17405 -1.3 -5.8 L-2-hydroxyglutarate oxidase compare
SGL_RS08155 -1.3 -2.8 Spy/CpxP family protein refolding chaperone compare
SGL_RS14045 -1.3 -3.3 hypothetical protein compare
SGL_RS11760 -1.3 -7.6 radical SAM protein compare
SGL_RS16860 -1.3 -6.3 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS09845 -1.3 -4.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS15865 -1.3 -3.5 septum site-determining protein MinD compare
SGL_RS17270 -1.3 -3.5 hypothetical protein compare
SGL_RS04490 -1.2 -2.2 2TM domain-containing protein compare
SGL_RS14285 -1.2 -3.9 hypothetical protein compare
SGL_RS10320 -1.2 -2.4 ribosome biogenesis GTPase Der compare
SGL_RS04510 -1.2 -5.2 DUF561 domain-containing protein compare
SGL_RS09820 -1.2 -3.2 ribosome maturation factor RimM compare
SGL_RS12545 -1.2 -2.3 GTPase Era compare
SGL_RS20080 -1.2 -2.3 DUF4335 domain-containing protein compare
SGL_RS03380 -1.2 -6.3 sulfite reductase, ferredoxin dependent compare
SGL_RS05240 -1.1 -3.1 phycobilisome linker polypeptide compare
SGL_RS18215 -1.1 -3.4 pentapeptide repeat-containing protein compare
SGL_RS11025 -1.1 -5.7 oxidoreductase compare
SGL_RS08845 -1.1 -6.1 LysR family transcriptional regulator compare
SGL_RS15875 -1.1 -7.2 FHA domain-containing protein compare
SGL_RS02145 -1.1 -6.7 metallophosphoesterase compare
SGL_RS03950 -1.1 -6.4 homocysteine biosynthesis protein compare
SGL_RS11835 -1.1 -3.0 transcription antitermination factor NusB compare
SGL_RS02375 -1.1 -6.4 DUF3086 domain-containing protein compare
SGL_RS15700 -1.1 -5.2 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS02095 -1.1 -4.7 dTDP-4-dehydrorhamnose reductase compare
SGL_RS00830 -1.0 -3.6 hypothetical protein compare
SGL_RS04820 -1.0 -1.4 LysR family transcriptional regulator compare
SGL_RS00800 -1.0 -2.8 putative addiction module antidote protein compare
SGL_RS12235 -1.0 -3.2 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS14505 -1.0 -4.5 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS13170 -1.0 -3.7 histidine kinase compare
SGL_RS15785 -1.0 -7.1 ParA family protein compare
SGL_RS14190 -1.0 -4.6 phosphate ABC transporter permease PstA compare
SGL_RS03265 -1.0 -1.7 photosystem II complex extrinsic protein PsbU compare
SGL_RS09305 -1.0 -4.8 adenosyl-hopene transferase HpnH compare
SGL_RS04155 -1.0 -3.3 reverse transcriptase domain-containing protein compare
SGL_RS06755 -1.0 -6.9 bacterioferritin-associated ferredoxin compare
SGL_RS07930 -1.0 -7.3 hypothetical protein compare
SGL_RS12335 -1.0 -3.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS11325 -0.9 -3.3 pitrilysin family protein compare
SGL_RS14195 -0.9 -4.1 phosphate ABC transporter permease subunit PstC compare
SGL_RS01900 -0.9 -4.4 GDP-L-fucose synthase compare
SGL_RS19170 -0.9 -1.8 chlorophyll a/b-binding protein compare
SGL_RS15790 -0.9 -5.1 hypothetical protein compare
SGL_RS12625 -0.9 -3.6 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS04525 -0.9 -2.1 photosynthesis system II assembly factor Ycf48 compare
SGL_RS09350 -0.9 -3.3 photosystem II biogenesis protein Psp29 compare
SGL_RS12540 -0.9 -4.9 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS18320 -0.9 -5.5 serine/threonine-protein kinase compare
SGL_RS13900 -0.9 -6.3 AI-2E family transporter compare
SGL_RS08160 -0.9 -3.7 hypothetical protein compare
SGL_RS02850 -0.9 -3.7 uracil phosphoribosyltransferase compare
SGL_RS04960 -0.8 -3.3 VOC family protein compare
SGL_RS12210 -0.8 -5.1 type IV pilus twitching motility protein PilT compare
SGL_RS15305 -0.8 -5.1 ribonuclease HI compare
SGL_RS05655 -0.8 -2.2 TPM domain-containing protein compare
SGL_RS15370 -0.8 -3.1 DnaJ C-terminal domain-containing protein compare
SGL_RS14930 -0.8 -3.8 type I methionyl aminopeptidase compare
SGL_RS17760 -0.8 -4.6 circadian clock protein KaiC compare
SGL_RS15805 -0.8 -3.0 two component system response regulator RpaA compare
SGL_RS18270 -0.8 -1.8 family 10 glycosylhydrolase compare
SGL_RS12755 -0.8 -4.7 IMS domain-containing protein compare
SGL_RS14585 -0.8 -1.4 TolB family protein compare
SGL_RS18170 -0.8 -2.7 PspA/IM30 family protein compare
SGL_RS15435 -0.8 -4.1 PD40 domain-containing protein compare
SGL_RS11945 -0.8 -3.9 sirohydrochlorin chelatase compare
SGL_RS02825 -0.8 -5.3 translational GTPase TypA compare
SGL_RS01205 -0.8 -3.4 ParB/RepB/Spo0J family partition protein compare
SGL_RS04580 -0.8 -1.9 DNA topoisomerase (ATP-hydrolyzing) subunit A compare
SGL_RS03060 -0.8 -2.6 phosphoadenosine phosphosulfate reductase compare
SGL_RS11135 -0.8 -1.3 D-alanyl-D-alanine dipeptidase DdpX compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in light_bubbling experiments