Experiment set2S484 for Enterobacter sp. TBS_079

Compare to:

Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Genes with specific phenotypes:

  gene name fitness t score description  
MPMX20_03519 -4.1 -6.2 hypothetical protein compare
MPMX20_01408 -3.6 -10.5 UvrABC system protein B compare
MPMX20_03076 -3.0 -6.6 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
MPMX20_03896 -2.8 -6.4 putative glycerol-3-phosphate acyltransferase compare
MPMX20_02833 -2.7 -5.0 hypothetical protein compare
MPMX20_03751 -2.6 -9.2 Single-stranded-DNA-specific exonuclease RecJ compare
MPMX20_04087 -2.6 -5.6 Transcriptional regulatory protein BasR compare
MPMX20_01083 -2.6 -5.9 hypothetical protein compare
MPMX20_02027 -2.5 -7.5 Inner membrane protein YdgC compare
MPMX20_03272 -2.4 -5.1 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX20_03481 -2.4 -6.1 Inner membrane protein YpjD compare
MPMX20_03121 -2.4 -7.0 HTH-type transcriptional regulator GalS compare
MPMX20_00276 -2.4 -12.6 UvrABC system protein A compare
MPMX20_02656 -2.3 -10.5 hypothetical protein compare
MPMX20_02548 -2.3 -8.6 Phosphate regulon transcriptional regulatory protein PhoB compare
MPMX20_01729 -2.3 -10.3 Glucans biosynthesis protein G compare
MPMX20_00943 -2.3 -8.5 Transcriptional activator protein Anr compare
MPMX20_01680 -2.3 -6.0 PTS system glucose-specific EIICB component compare
MPMX20_00945 -2.2 -10.7 hypothetical protein compare
MPMX20_02545 -2.2 -7.5 hypothetical protein compare
MPMX20_02245 -2.2 -9.2 hypothetical protein compare
MPMX20_01514 -2.1 -13.4 Type II secretion system protein C compare
MPMX20_01430 -2.1 -12.3 putative fimbrial chaperone LpfB compare
MPMX20_02064 -2.1 -5.2 ATP-dependent dethiobiotin synthetase BioD 1 compare
MPMX20_01384 -2.1 -6.0 Galactokinase compare
MPMX20_03950 -2.1 -11.8 Tyrosine recombinase XerC compare
MPMX20_00467 -2.0 -6.4 hypothetical protein compare
MPMX20_00937 -2.0 -12.7 Lectin A compare
MPMX20_02317 -2.0 -10.2 Cation efflux system protein CusF compare
MPMX20_00003 -2.0 -7.0 DNA replication and repair protein RecF compare
MPMX20_02673 -2.0 -6.7 hypothetical protein compare
MPMX20_01730 -2.0 -8.1 Glucans biosynthesis glucosyltransferase H compare
MPMX20_00606 -2.0 -6.2 hypothetical protein compare
MPMX20_03116 -2.0 -7.5 hypothetical protein compare
MPMX20_02118 -2.0 -6.6 hypothetical protein compare
MPMX20_02544 -2.0 -7.2 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX compare
MPMX20_01527 -2.0 -5.2 hypothetical protein compare
MPMX20_00215 -1.9 -5.8 Sulfur carrier protein ThiS adenylyltransferase compare
MPMX20_02838 -1.9 -6.7 UvrABC system protein C compare
MPMX20_01171 -1.9 -7.0 hypothetical protein compare
MPMX20_02612 -1.9 -5.1 Respiratory nitrate reductase 1 gamma chain compare
MPMX20_02292 -1.9 -8.1 hypothetical protein compare
MPMX20_01792 -1.9 -5.6 HTH-type transcriptional repressor ComR compare
MPMX20_00217 -1.8 -7.1 Phosphomethylpyrimidine synthase compare
MPMX20_01825 -1.8 -11.0 hypothetical protein compare
MPMX20_02948 -1.8 -8.1 Transcriptional regulatory protein RcsA compare
MPMX20_03495 -1.8 -10.0 HTH-type transcriptional regulator DmlR compare
MPMX20_00405 -1.8 -8.5 ISKra4 family transposase ISCep1 compare
MPMX20_03231 -1.8 -10.9 hypothetical protein compare
MPMX20_03949 -1.7 -7.6 hypothetical protein compare
MPMX20_01233 -1.7 -10.8 Leukotoxin export ATP-binding protein LtxB compare
MPMX20_01431 -1.7 -8.8 putative major fimbrial subunit LpfA compare
MPMX20_00585 -1.7 -6.2 hypothetical protein compare
MPMX20_04713 -1.7 -6.4 hypothetical protein compare
MPMX20_02125 -1.7 -9.3 putative oxidoreductase compare
MPMX20_01232 -1.7 -10.5 Prolyl endopeptidase compare
MPMX20_03157 -1.7 -7.3 hypothetical protein compare
MPMX20_01167 -1.7 -10.0 Low conductance mechanosensitive channel YnaI compare
MPMX20_02562 -1.7 -7.2 hypothetical protein compare
MPMX20_00042 -1.6 -9.6 hypothetical protein compare
MPMX20_01404 -1.6 -5.7 8-amino-7-oxononanoate synthase compare
MPMX20_01524 -1.6 -9.0 hypothetical protein compare
MPMX20_01932 -1.6 -6.4 putative fimbrial chaperone LpfB compare
MPMX20_03935 -1.6 -12.7 hypothetical protein compare
MPMX20_01936 -1.6 -11.6 hypothetical protein compare
MPMX20_02851 -1.6 -11.3 dTDP-4-amino-4,6-dideoxy-D-glucose transaminase compare
MPMX20_01931 -1.6 -8.0 putative major fimbrial subunit LpfA compare
MPMX20_04718 -1.6 -7.4 Antirestriction protein KlcA compare
MPMX20_01821 -1.5 -8.5 Mannan endo-1,4-beta-mannosidase compare
MPMX20_01627 -1.5 -8.8 hypothetical protein compare
MPMX20_02528 -1.5 -8.7 Miniconductance mechanosensitive channel YbdG compare
MPMX20_00835 -1.5 -7.9 Penicillin-binding protein 1B compare
MPMX20_00408 -1.5 -9.4 hypothetical protein compare
MPMX20_04451 -1.5 -5.8 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
MPMX20_00753 -1.5 -6.0 RNA polymerase-associated protein RapA compare
MPMX20_03058 -1.5 -9.1 putative fimbrial chaperone EcpB compare
MPMX20_02458 -1.5 -8.3 Outer membrane porin G compare
MPMX20_00407 -1.5 -8.9 hypothetical protein compare
MPMX20_02304 -1.5 -8.5 hypothetical protein compare
MPMX20_03496 -1.4 -11.0 Citrate/malate transporter compare
MPMX20_01234 -1.4 -10.0 Colicin V secretion protein CvaA compare
MPMX20_02119 -1.4 -7.0 hypothetical protein compare
MPMX20_00351 -1.4 -5.7 hypothetical protein compare
MPMX20_03718 -1.4 -8.7 Oligogalacturonate-specific porin KdgM compare
MPMX20_00565 -1.4 -5.8 Cardiolipin synthase A compare
MPMX20_01270 -1.4 -10.2 putative HTH-type transcriptional regulator YbdO compare
MPMX20_04715 -1.4 -6.6 Relaxosome protein TraM compare
MPMX20_00947 -1.4 -6.9 hypothetical protein compare
MPMX20_02054 -1.4 -10.2 Spermidine export protein MdtJ compare
MPMX20_03160 -1.4 -6.2 hypothetical protein compare
MPMX20_02468 -1.4 -9.5 Glucosylglycerate phosphorylase compare
MPMX20_01170 -1.4 -7.0 hypothetical protein compare
MPMX20_00690 -1.3 -9.9 Protein GltF compare
MPMX20_02651 -1.3 -9.1 hypothetical protein compare
MPMX20_03959 -1.3 -7.8 hypothetical protein compare
MPMX20_02155 -1.3 -8.2 Coagulase/fibrinolysin compare
MPMX20_01212 -1.3 -5.6 hypothetical protein compare
MPMX20_01173 -1.3 -8.9 hypothetical protein compare
MPMX20_00050 -1.3 -8.4 PTS system N,N'-diacetylchitobiose-specific EIIA component compare
MPMX20_02802 -1.3 -6.6 Flagellar transcriptional regulator FlhD compare
MPMX20_04716 -1.3 -6.1 hypothetical protein compare
MPMX20_02117 -1.3 -5.9 hypothetical protein compare
MPMX20_01562 -1.2 -6.4 Formate acetyltransferase 1 compare
MPMX20_00280 -1.2 -10.3 putative cyclic di-GMP phosphodiesterase PdeC compare
MPMX20_02111 -1.2 -5.3 hypothetical protein compare
MPMX20_04026 -1.2 -7.1 hypothetical protein compare
MPMX20_03558 -1.2 -9.4 Glycine betaine/proline betaine transport system ATP-binding protein ProV compare
MPMX20_03656 -1.2 -6.2 Glycerate 2-kinase compare
MPMX20_02291 -1.2 -6.9 hypothetical protein compare
MPMX20_00143 -1.2 -9.4 HTH-type transcriptional activator AmpR compare
MPMX20_01803 -1.2 -8.0 Cyclic di-GMP phosphodiesterase CdgJ compare
MPMX20_03159 -1.2 -6.5 hypothetical protein compare
MPMX20_02127 -1.2 -6.5 Aspartate-semialdehyde dehydrogenase compare
MPMX20_03848 -1.2 -6.2 hypothetical protein compare
MPMX20_00930 -1.2 -5.6 hypothetical protein compare
MPMX20_01879 -1.2 -6.1 HTH-type transcriptional regulator ChbR compare
MPMX20_02112 -1.2 -5.9 hypothetical protein compare
MPMX20_03175 -1.2 -6.2 Outer membrane porin C compare
MPMX20_04036 -1.1 -5.6 hypothetical protein compare
MPMX20_04030 -1.1 -8.2 hypothetical protein compare
MPMX20_02030 -1.1 -5.4 Protein YdgH compare
MPMX20_02671 -1.1 -8.3 hypothetical protein compare
MPMX20_01518 -1.1 -7.8 Type II secretion system protein G compare
MPMX20_02848 -1.1 -6.2 hypothetical protein compare
MPMX20_02482 -1.1 -9.2 putative diguanylate cyclase DgcT compare
MPMX20_01737 -1.1 -7.5 Cytochrome b561 compare
MPMX20_01935 -1.1 -7.1 Protein FimG compare
MPMX20_02290 -1.1 -5.8 hypothetical protein compare
MPMX20_02448 -1.1 -5.4 hypothetical protein compare
MPMX20_02169 -1.1 -5.3 hypothetical protein compare
MPMX20_00404 -1.1 -7.5 hypothetical protein compare
MPMX20_02318 -1.1 -6.9 Cation efflux system protein CusC compare
MPMX20_01923 -1.1 -8.0 Putative glycoside/cation symporter YagG compare
MPMX20_02405 -1.1 -7.5 Aerotaxis receptor compare
MPMX20_01812 -1.1 -6.1 hypothetical protein compare
MPMX20_02185 -1.1 -8.0 hypothetical protein compare
MPMX20_00689 -1.0 -6.4 Protein GltF compare
MPMX20_00535 -1.0 -6.0 hypothetical protein compare
MPMX20_01827 -1.0 -7.7 hypothetical protein compare
MPMX20_00403 -1.0 -6.0 hypothetical protein compare
MPMX20_03288 -1.0 -6.4 putative cyclic di-GMP phosphodiesterase PdeA compare
MPMX20_02541 -1.0 -5.2 hypothetical protein compare
MPMX20_03049 +1.0 7.2 putative diguanylate cyclase DgcE compare
MPMX20_02028 +1.5 5.9 Dihydromonapterin reductase compare
MPMX20_00898 +1.6 6.9 hypothetical protein compare
MPMX20_03009 +1.6 5.1 Chain length determinant protein compare
MPMX20_04291 +1.7 11.0 Osmolarity sensor protein EnvZ compare
MPMX20_00328 +2.2 14.8 Clamp-binding protein CrfC compare
MPMX20_03471 +2.2 7.0 hypothetical protein compare
MPMX20_02212 +2.2 8.8 HTH-type transcriptional regulator GbpR compare
MPMX20_04413 +2.5 11.0 Aerobic C4-dicarboxylate transport protein compare
MPMX20_02488 +2.6 10.9 Cyclic di-GMP phosphodiesterase PdeR compare
MPMX20_02618 +2.9 6.6 Nitrate/nitrite response regulator protein NarL compare
MPMX20_00091 +2.9 8.4 hypothetical protein compare
MPMX20_01839 +3.2 14.9 hypothetical protein compare
MPMX20_03453 +3.3 17.3 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX20_03281 +3.4 16.9 Glucokinase compare
MPMX20_01840 +3.4 13.2 hypothetical protein compare
MPMX20_00908 +3.6 19.2 Glutathione hydrolase-like YwrD proenzyme compare
MPMX20_02700 +3.7 15.0 hypothetical protein compare
MPMX20_04304 +4.6 26.4 Maltodextrin phosphorylase compare
MPMX20_02617 +5.1 10.5 Nitrate/nitrite sensor protein NarX compare
MPMX20_02616 +6.7 27.2 Nitrate/nitrite transporter NarK compare


Specific phenotypes for in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 across organisms