Experiment set2S481 for Enterobacter sp. TBS_079

Compare to:

Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Genes with specific phenotypes:

  gene name fitness t score description  
MPMX20_03121 -4.8 -8.0 HTH-type transcriptional regulator GalS compare
MPMX20_03481 -4.5 -10.4 Inner membrane protein YpjD compare
MPMX20_03519 -4.3 -10.6 hypothetical protein compare
MPMX20_00071 -4.2 -10.5 hypothetical protein compare
MPMX20_02027 -3.6 -11.6 Inner membrane protein YdgC compare
MPMX20_01083 -3.6 -9.2 hypothetical protein compare
MPMX20_00216 -2.5 -8.5 Thiamine-phosphate synthase compare
MPMX20_03076 -2.4 -9.5 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
MPMX20_01408 -2.3 -11.4 UvrABC system protein B compare
MPMX20_04451 -2.3 -13.1 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
MPMX20_03239 -2.3 -6.2 Epimerase family protein compare
MPMX20_03701 -2.2 -6.1 Glc operon transcriptional activator compare
MPMX20_00276 -2.2 -14.1 UvrABC system protein A compare
MPMX20_01384 -2.2 -7.3 Galactokinase compare
MPMX20_04718 -2.2 -13.4 Antirestriction protein KlcA compare
MPMX20_04087 -2.1 -7.4 Transcriptional regulatory protein BasR compare
MPMX20_01171 -2.1 -12.0 hypothetical protein compare
MPMX20_02656 -2.1 -12.1 hypothetical protein compare
MPMX20_01514 -2.0 -15.7 Type II secretion system protein C compare
MPMX20_01792 -2.0 -9.4 HTH-type transcriptional repressor ComR compare
MPMX20_01680 -2.0 -8.6 PTS system glucose-specific EIICB component compare
MPMX20_00606 -2.0 -11.5 hypothetical protein compare
MPMX20_00253 -2.0 -8.4 Maltoporin compare
MPMX20_01430 -2.0 -15.0 putative fimbrial chaperone LpfB compare
MPMX20_01232 -1.9 -13.7 Prolyl endopeptidase compare
MPMX20_00042 -1.8 -13.9 hypothetical protein compare
MPMX20_00142 -1.8 -9.5 Aldehyde dehydrogenase B compare
MPMX20_00513 -1.8 -7.2 hypothetical protein compare
MPMX20_01527 -1.8 -10.0 hypothetical protein compare
MPMX20_04493 -1.8 -7.1 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
MPMX20_00251 -1.8 -7.9 Maltose/maltodextrin-binding periplasmic protein compare
MPMX20_01074 -1.7 -7.0 Recombination protein RecR compare
MPMX20_04305 -1.7 -9.4 HTH-type transcriptional regulator MalT compare
MPMX20_04665 -1.7 -9.0 hypothetical protein compare
MPMX20_04239 -1.7 -5.5 Transcriptional regulator DauR compare
MPMX20_00943 -1.7 -9.9 Transcriptional activator protein Anr compare
MPMX20_00405 -1.6 -10.3 ISKra4 family transposase ISCep1 compare
MPMX20_01825 -1.6 -11.9 hypothetical protein compare
MPMX20_00252 -1.6 -6.0 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX20_02215 -1.6 -7.4 hypothetical protein compare
MPMX20_00947 -1.6 -9.5 hypothetical protein compare
MPMX20_03798 -1.5 -6.0 Agmatinase compare
MPMX20_02018 -1.5 -5.2 Maltose regulon regulatory protein MalI compare
MPMX20_02224 -1.5 -6.0 hypothetical protein compare
MPMX20_00250 -1.5 -9.6 Maltose/maltodextrin transport system permease protein MalF compare
MPMX20_01167 -1.5 -11.0 Low conductance mechanosensitive channel YnaI compare
MPMX20_02032 -1.5 -6.5 NAD(P) transhydrogenase subunit beta compare
MPMX20_00249 -1.5 -5.7 Maltose/maltodextrin transport system permease protein MalG compare
MPMX20_01233 -1.5 -11.0 Leukotoxin export ATP-binding protein LtxB compare
MPMX20_00937 -1.4 -10.6 Lectin A compare
MPMX20_04274 -1.4 -5.9 Phosphoglycolate phosphatase compare
MPMX20_01729 -1.4 -11.1 Glucans biosynthesis protein G compare
MPMX20_02033 -1.4 -5.8 Universal stress protein E compare
MPMX20_00827 -1.4 -5.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
MPMX20_02031 -1.4 -7.8 NAD(P) transhydrogenase subunit alpha compare
MPMX20_03231 -1.4 -9.9 hypothetical protein compare
MPMX20_03935 -1.3 -11.6 hypothetical protein compare
MPMX20_02304 -1.3 -9.4 hypothetical protein compare
MPMX20_03950 -1.3 -9.4 Tyrosine recombinase XerC compare
MPMX20_00945 -1.3 -9.6 hypothetical protein compare
MPMX20_00003 -1.3 -7.2 DNA replication and repair protein RecF compare
MPMX20_04750 -1.3 -7.4 Nucleoid occlusion protein compare
MPMX20_02544 -1.3 -7.9 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX compare
MPMX20_01627 -1.3 -8.6 hypothetical protein compare
MPMX20_01431 -1.3 -8.2 putative major fimbrial subunit LpfA compare
MPMX20_03219 -1.3 -10.2 HTH-type transcriptional regulator HdfR compare
MPMX20_02125 -1.2 -9.2 putative oxidoreductase compare
MPMX20_02246 -1.2 -6.6 hypothetical protein compare
MPMX20_02118 -1.2 -5.8 hypothetical protein compare
MPMX20_03175 -1.2 -8.2 Outer membrane porin C compare
MPMX20_02669 -1.2 -6.5 hypothetical protein compare
MPMX20_02545 -1.2 -6.4 hypothetical protein compare
MPMX20_01170 -1.2 -7.4 hypothetical protein compare
MPMX20_01234 -1.2 -9.6 Colicin V secretion protein CvaA compare
MPMX20_03751 -1.2 -7.8 Single-stranded-DNA-specific exonuclease RecJ compare
MPMX20_04088 -1.2 -6.2 Sensor protein BasS compare
MPMX20_00408 -1.1 -8.8 hypothetical protein compare
MPMX20_04313 -1.1 -5.3 Glycogen debranching enzyme compare
MPMX20_00050 -1.1 -8.9 PTS system N,N'-diacetylchitobiose-specific EIIA component compare
MPMX20_02245 -1.1 -6.6 hypothetical protein compare
MPMX20_01403 -1.1 -6.0 Biotin synthase compare
MPMX20_00757 -1.1 -6.5 Ribulokinase compare
MPMX20_00407 -1.1 -9.2 hypothetical protein compare
MPMX20_04715 -1.1 -7.0 Relaxosome protein TraM compare
MPMX20_00217 -1.1 -6.6 Phosphomethylpyrimidine synthase compare
MPMX20_03684 -1.1 -7.6 Protease 3 compare
MPMX20_03718 -1.1 -8.3 Oligogalacturonate-specific porin KdgM compare
MPMX20_01821 -1.1 -8.7 Mannan endo-1,4-beta-mannosidase compare
MPMX20_03058 -1.1 -8.4 putative fimbrial chaperone EcpB compare
MPMX20_02054 -1.1 -8.7 Spermidine export protein MdtJ compare
MPMX20_02458 -1.0 -7.0 Outer membrane porin G compare
MPMX20_01524 -1.0 -8.0 hypothetical protein compare
MPMX20_00351 -1.0 -5.8 hypothetical protein compare
MPMX20_00756 -1.0 -6.3 L-arabinose isomerase compare
MPMX20_01435 +1.1 8.0 putative protein McbA compare
MPMX20_03810 +1.3 9.0 hypothetical protein compare
MPMX20_02617 +1.3 8.4 Nitrate/nitrite sensor protein NarX compare
MPMX20_03009 +1.4 8.5 Chain length determinant protein compare
MPMX20_04118 +1.7 14.0 Cytosol aminopeptidase compare
MPMX20_01304 +1.7 9.2 Glutamate/aspartate import permease protein GltK compare
MPMX20_01305 +1.8 12.8 Glutamate/aspartate import permease protein GltJ compare
MPMX20_03049 +1.9 15.3 putative diguanylate cyclase DgcE compare
MPMX20_02616 +2.0 13.0 Nitrate/nitrite transporter NarK compare
MPMX20_03417 +2.0 16.5 hypothetical protein compare
MPMX20_02488 +2.1 10.4 Cyclic di-GMP phosphodiesterase PdeR compare
MPMX20_04303 +2.2 19.5 4-alpha-glucanotransferase compare
MPMX20_00328 +2.3 18.8 Clamp-binding protein CrfC compare
MPMX20_03281 +2.5 18.3 Glucokinase compare
MPMX20_00091 +2.7 14.9 hypothetical protein compare
MPMX20_02618 +3.8 21.9 Nitrate/nitrite response regulator protein NarL compare
MPMX20_04304 +5.2 23.7 Maltodextrin phosphorylase compare


Specific phenotypes for in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 across organisms