Experiment set2S472 for Rhodopseudomonas palustris CGA009

MDC_bicarb with Sodium butyrate

Group: carbon source
Media: MDC_bicarb + Sodium butyrate (10 mM) + Light intensity (12 µmol photons/m2/s from a 60-W incandescent light bulb)
Culturing: RPal_CGA009_ML8, tube, Anaerobic, at 30 (C)
By: Rpal_McKinlay on 9/7/24
Media components: 42.5 mM Disodium phosphate, 22 mM Potassium phosphate monobasic, 0.1 mM Sodium thiosulfate, 0.0146 mM 4-Aminobenzoic acid, 1 mM Magnesium sulfate, 0.1 mM Calcium chloride, 10 mM Sodium bicarbonate, UW concentrated base (0.02 g/L Nitrilotriacetic acid, 0.0289 g/L Magnesium sulfate, 0.00667 g/L Calcium chloride dihydrate, 1.85e-05 g/L ammonium molybdate tetrahydrate, 0.000698 g/L Iron (II) sulfate heptahydrate, 0.00025 g/L EDTA, 0.001095 g/L Zinc sulfate heptahydrate, 0.000154 g/L Manganese (II) sulfate monohydrate, 3.92e-05 g/L Copper (II) sulfate pentahydrate, 2.5e-05 g/L Cobalt(II) nitrate hexahydrate, 1.77e-05 g/L sodium tetraborate decahydrate)

Specific Phenotypes

For 5 genes in this experiment

For carbon source Sodium butyrate in Rhodopseudomonas palustris CGA009

For carbon source Sodium butyrate across organisms

SEED Subsystems

Subsystem	#Specific
Ammonia assimilation	1
Coenzyme B12 biosynthesis	1
Ton and Tol transport systems	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.