Experiment set2S465 for Rhodopseudomonas palustris CGA009

PM with argon and Sodium bicarbonate 20 mM and Sodium thiosulfate pentahydrate 50 mM

Group: carbon source
Media: PM_argon + Sodium bicarbonate (20 mM) + Sodium thiosulfate pentahydrate (50 mM) + Light intensity (12 µmol photons/m2/s from a 60-W incandescent light bulb)
Culturing: RPal_CGA009_ML8, tube, Anaerobic, at 30 (C)
By: Rpal_McKinlay on 9/7/24
Media components: 12.5 mM Disodium phosphate, 12.5 mM Potassium phosphate monobasic, 1 g/L Ammonium Sulfate, 0.1 mM Sodium thiosulfate pentahydrate, 0.002 g/L 4-Aminobenzoic acid, UW concentrated base (0.02 g/L Nitrilotriacetic acid, 0.0289 g/L Magnesium sulfate, 0.00667 g/L Calcium chloride dihydrate, 1.85e-05 g/L ammonium molybdate tetrahydrate, 0.000698 g/L Iron (II) sulfate heptahydrate, 0.00025 g/L EDTA, 0.001095 g/L Zinc sulfate heptahydrate, 0.000154 g/L Manganese (II) sulfate monohydrate, 3.92e-05 g/L Copper (II) sulfate pentahydrate, 2.5e-05 g/L Cobalt(II) nitrate hexahydrate, 1.77e-05 g/L sodium tetraborate decahydrate)

Specific Phenotypes

For 5 genes in this experiment

For carbon source Sodium bicarbonate in Rhodopseudomonas palustris CGA009

For carbon source Sodium bicarbonate across organisms

SEED Subsystems

Subsystem	#Specific
Sulfur oxidation	2
Biogenesis of c-type cytochromes	1
Experimental tye	1
Periplasmic disulfide interchange	1
Soluble cytochromes and functionally related electron carriers	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.