Experiment set2S423 for Phocaeicola vulgatus CL09T03C04

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
HMPREF1058_RS11730 -6.4 -3.3 4-hydroxy-tetrahydrodipicolinate reductase compare
HMPREF1058_RS12115 -6.3 -10.6 acetylglutamate kinase compare
HMPREF1058_RS08850 -6.2 -8.6 N-acetyltransferase compare
HMPREF1058_RS14785 -6.1 -4.2 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
HMPREF1058_RS08830 -6.1 -8.4 pyrroline-5-carboxylate reductase compare
HMPREF1058_RS14725 -6.0 -10.0 cofactor-independent phosphoglycerate mutase compare
HMPREF1058_RS14920 -5.9 -9.8 serine dehydratase subunit alpha family protein compare
HMPREF1058_RS12455 -5.9 -3.0 dUTP diphosphatase compare
HMPREF1058_RS08645 -5.9 -11.2 glutamate-5-semialdehyde dehydrogenase compare
HMPREF1058_RS02115 -5.7 -9.6 NADP-specific glutamate dehydrogenase compare
HMPREF1058_RS12490 -5.7 -3.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
HMPREF1058_RS08840 -5.6 -11.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
HMPREF1058_RS09585 -5.6 -16.7 argininosuccinate lyase compare
HMPREF1058_RS14565 -5.5 -13.3 3-isopropylmalate dehydrogenase compare
HMPREF1058_RS10820 -5.5 -15.5 4-phosphoerythronate dehydrogenase PdxB compare
HMPREF1058_RS15885 -5.5 -8.4 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
HMPREF1058_RS17935 -5.5 -5.3 glycosyltransferase compare
HMPREF1058_RS14790 -5.5 -11.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HMPREF1058_RS14610 -5.4 -12.2 adenylosuccinate synthase compare
HMPREF1058_RS12105 -5.4 -5.3 shikimate kinase compare
HMPREF1058_RS15870 -5.4 -8.3 ATP phosphoribosyltransferase compare
HMPREF1058_RS13655 -5.3 -15.8 cardiolipin synthase compare
HMPREF1058_RS14545 -5.3 -10.8 2-isopropylmalate synthase compare
HMPREF1058_RS15875 -5.3 -8.1 histidinol dehydrogenase compare
HMPREF1058_RS07175 -5.3 -9.5 anthranilate synthase component I family protein compare
HMPREF1058_RS14730 -5.3 -9.5 threonine synthase compare
HMPREF1058_RS15880 -5.3 -9.5 histidinol-phosphate transaminase compare
HMPREF1058_RS17940 -5.3 -3.6 alpha-amylase compare
HMPREF1058_RS14550 -5.2 -12.2 3-isopropylmalate dehydratase large subunit compare
HMPREF1058_RS06170 -5.2 -6.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
HMPREF1058_RS10075 -5.2 -13.5 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
HMPREF1058_RS06175 -5.2 -3.6 imidazole glycerol phosphate synthase subunit HisF compare
HMPREF1058_RS14505 -5.2 -3.6 mechanosensitive ion channel compare
HMPREF1058_RS03290 -5.2 -3.6 thiamine phosphate synthase compare
HMPREF1058_RS15075 -5.1 -11.9 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
HMPREF1058_RS08845 -5.1 -9.8 argininosuccinate synthase compare
HMPREF1058_RS07170 -5.1 -9.7 tryptophan synthase subunit beta compare
HMPREF1058_RS08325 -5.1 -7.7 pyridoxine 5'-phosphate synthase compare
HMPREF1058_RS14720 -5.1 -16.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
HMPREF1058_RS16835 -5.0 -6.0 ketol-acid reductoisomerase compare
HMPREF1058_RS12780 -5.0 -13.4 M20 family metallo-hydrolase compare
HMPREF1058_RS10995 -5.0 -7.7 phosphoribosylamine--glycine ligase compare
HMPREF1058_RS11270 -5.0 -10.1 acetyl-CoA hydrolase/transferase family protein compare
HMPREF1058_RS16820 -5.0 -8.9 biosynthetic-type acetolactate synthase large subunit compare
HMPREF1058_RS07185 -4.9 -11.5 anthranilate phosphoribosyltransferase compare
HMPREF1058_RS14795 -4.9 -5.8 prephenate dehydratase compare
HMPREF1058_RS09675 -4.9 -5.7 type II 3-dehydroquinate dehydratase compare
HMPREF1058_RS07955 -4.9 -12.2 phosphoribosylformylglycinamidine synthase compare
HMPREF1058_RS16760 -4.9 -3.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HMPREF1058_RS08025 -4.8 -6.6 phosphoribosylformylglycinamidine cyclo-ligase compare
HMPREF1058_RS03910 -4.8 -3.3 alpha amylase C-terminal domain-containing protein compare
HMPREF1058_RS07190 -4.8 -6.4 indole-3-glycerol phosphate synthase TrpC compare
HMPREF1058_RS16815 -4.8 -11.6 dihydroxy-acid dehydratase compare
HMPREF1058_RS17885 -4.8 -13.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
HMPREF1058_RS10080 -4.8 -15.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
HMPREF1058_RS07180 -4.8 -4.7 aminodeoxychorismate/anthranilate synthase component II compare
HMPREF1058_RS07200 -4.8 -10.2 tryptophan synthase subunit alpha compare
HMPREF1058_RS08650 -4.8 -10.2 glutamate 5-kinase compare
HMPREF1058_RS06180 -4.8 -5.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
HMPREF1058_RS02755 -4.7 -3.3 translocation/assembly module TamB domain-containing protein compare
HMPREF1058_RS03000 -4.7 -7.9 IMP dehydrogenase compare
HMPREF1058_RS14560 -4.7 -12.5 2-isopropylmalate synthase compare
HMPREF1058_RS14555 -4.7 -2.7 3-isopropylmalate dehydratase small subunit compare
HMPREF1058_RS08535 -4.7 -4.4 elongation factor P compare
HMPREF1058_RS16825 -4.7 -9.3 acetolactate synthase small subunit compare
HMPREF1058_RS03800 -4.7 -8.4 serine hydroxymethyltransferase compare
HMPREF1058_RS03285 -4.7 -7.1 thiazole synthase compare
HMPREF1058_RS14770 -4.7 -8.4 prephenate dehydrogenase compare
HMPREF1058_RS06195 -4.6 -7.1 diaminopimelate decarboxylase compare
HMPREF1058_RS10840 -4.5 -2.6 hypothetical protein compare
HMPREF1058_RS04065 -4.5 -2.3 VWA domain-containing protein compare
HMPREF1058_RS01650 -4.5 -5.3 hypothetical protein compare
HMPREF1058_RS08835 -4.5 -9.7 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
HMPREF1058_RS06820 -4.4 -10.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
HMPREF1058_RS17155 -4.3 -4.2 dCMP deaminase family protein compare
HMPREF1058_RS14215 -4.3 -5.9 (d)CMP kinase compare
HMPREF1058_RS07195 -4.3 -4.4 phosphoribosylanthranilate isomerase compare
HMPREF1058_RS08640 -4.3 -3.5 acetylornithine carbamoyltransferase compare
HMPREF1058_RS11490 -4.3 -6.5 redox-regulated ATPase YchF compare
HMPREF1058_RS15565 -4.2 -18.1 hypothetical protein compare
HMPREF1058_RS08855 -4.2 -8.4 arginine repressor compare
HMPREF1058_RS06080 -4.0 -5.5 glutamine synthetase III compare
HMPREF1058_RS17035 -4.0 -8.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
HMPREF1058_RS18265 -4.0 -2.7 aspartate 1-decarboxylase compare
HMPREF1058_RS03265 -3.9 -11.9 2-iminoacetate synthase ThiH compare
HMPREF1058_RS04295 -3.9 -3.8 3-phosphoglycerate dehydrogenase compare
HMPREF1058_RS04080 -3.9 -2.7 AAA family ATPase compare
HMPREF1058_RS06190 -3.9 -3.8 aspartate kinase compare
HMPREF1058_RS02220 -3.9 -3.8 branched-chain amino acid aminotransferase compare
HMPREF1058_RS17965 -3.8 -1.6 DUF452 family protein compare
HMPREF1058_RS03280 -3.8 -11.8 phosphomethylpyrimidine synthase ThiC compare
HMPREF1058_RS13970 -3.8 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
HMPREF1058_RS10955 -3.8 -6.4 phosphatase PAP2 family protein compare
HMPREF1058_RS16730 -3.8 -2.6 chorismate synthase compare
HMPREF1058_RS16690 -3.8 -7.1 NTP transferase domain-containing protein compare
HMPREF1058_RS17930 -3.8 -15.1 glycogen debranching enzyme N-terminal domain-containing protein compare
HMPREF1058_RS00700 -3.8 -11.1 DUF4831 family protein compare
HMPREF1058_RS00560 -3.7 -3.6 anaerobic ribonucleoside triphosphate reductase compare
HMPREF1058_RS07440 -3.6 -7.7 aspartate--ammonia ligase compare
HMPREF1058_RS06225 -3.6 -4.3 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1058_RS03085 -3.6 -3.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HMPREF1058_RS14490 -3.6 -12.9 S9 family peptidase compare
HMPREF1058_RS03260 -3.6 -10.0 HesA/MoeB/ThiF family protein compare
HMPREF1058_RS02750 -3.6 -8.1 BamA/TamA family outer membrane protein compare
HMPREF1058_RS16845 -3.5 -3.4 SurA N-terminal domain-containing protein compare
HMPREF1058_RS04045 -3.5 -4.2 tetratricopeptide repeat protein compare
HMPREF1058_RS16750 -3.5 -2.4 shikimate dehydrogenase compare
HMPREF1058_RS00590 -3.5 -4.4 hypothetical protein compare
HMPREF1058_RS01620 -3.4 -1.4 tRNA-Lys compare
HMPREF1058_RS05780 -3.4 -9.7 PD40 domain-containing protein compare
HMPREF1058_RS01705 -3.4 -2.2 Na+/H+ antiporter NhaC family protein compare
HMPREF1058_RS04300 -3.4 -4.7 3-phosphoserine/phosphohydroxythreonine transaminase compare
HMPREF1058_RS17040 -3.4 -4.7 NTP transferase domain-containing protein compare
HMPREF1058_RS03075 -3.4 -7.6 DNA helicase RecQ compare
HMPREF1058_RS06160 -3.4 -8.1 formyltetrahydrofolate deformylase compare
HMPREF1058_RS17050 -3.3 -8.6 CDP-alcohol phosphatidyltransferase family protein compare
HMPREF1058_RS17060 -3.3 -6.7 HAD family hydrolase compare
HMPREF1058_RS03970 -3.3 -2.3 dihydroorotate dehydrogenase electron transfer subunit compare
HMPREF1058_RS03245 -3.3 -1.9 thiamine phosphate synthase compare
HMPREF1058_RS10495 -3.3 -3.1 rhomboid family intramembrane serine protease compare
HMPREF1058_RS04075 -3.2 -2.2 DUF58 domain-containing protein compare
HMPREF1058_RS17950 -3.2 -6.2 biotin synthase BioB compare
HMPREF1058_RS04365 -3.2 -15.0 translocation/assembly module TamB compare
HMPREF1058_RS11625 -3.2 -14.9 S41 family peptidase compare
HMPREF1058_RS01745 -3.2 -5.3 PorT family protein compare
HMPREF1058_RS09685 -3.1 -14.0 tetratricopeptide repeat protein compare
HMPREF1058_RS17130 -3.1 -2.1 tetratricopeptide repeat protein compare
HMPREF1058_RS01265 -3.1 -4.2 FHA domain-containing protein compare
HMPREF1058_RS15395 -3.1 -2.1 dihydroorotase compare
HMPREF1058_RS06165 -3.1 -5.8 imidazole glycerol phosphate synthase subunit HisH compare
HMPREF1058_RS14930 -3.1 -8.8 AraC family transcriptional regulator compare
HMPREF1058_RS17080 -3.1 -3.1 sigma-54-dependent Fis family transcriptional regulator compare
HMPREF1058_RS12990 -3.0 -2.6 hypothetical protein compare
HMPREF1058_RS14005 -3.0 -2.1 3-dehydroquinate synthase compare
HMPREF1058_RS15435 -3.0 -10.8 hypothetical protein compare
HMPREF1058_RS03510 -2.9 -6.5 YebC/PmpR family DNA-binding transcriptional regulator compare
HMPREF1058_RS05145 -2.9 -7.3 ATP-binding protein compare
HMPREF1058_RS11040 -2.9 -5.2 polysaccharide deacetylase family protein compare
HMPREF1058_RS05035 -2.9 -13.6 C69 family dipeptidase compare
HMPREF1058_RS04070 -2.9 -3.4 hypothetical protein compare
HMPREF1058_RS17975 -2.9 -7.6 ATP-dependent dethiobiotin synthetase BioD compare
HMPREF1058_RS03535 -2.9 -2.0 UvrD-helicase domain-containing protein compare
HMPREF1058_RS17960 -2.9 -8.9 8-amino-7-oxononanoate synthase compare
HMPREF1058_RS11890 -2.9 -4.8 Holliday junction branch migration DNA helicase RuvB compare
HMPREF1058_RS05805 -2.8 -11.3 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
HMPREF1058_RS11205 -2.8 -2.2 radical SAM protein compare
HMPREF1058_RS03295 -2.8 -1.5 sulfur carrier protein ThiS compare
HMPREF1058_RS02135 -2.7 -14.4 phosphoenolpyruvate synthase compare
HMPREF1058_RS09610 -2.7 -7.0 peptide chain release factor N(5)-glutamine methyltransferase compare
HMPREF1058_RS07695 -2.7 -5.3 DUF4827 domain-containing protein compare
HMPREF1058_RS17205 -2.7 -1.9 DUF4199 domain-containing protein compare
HMPREF1058_RS07310 -2.7 -10.4 glucosamine-6-phosphate deaminase compare
HMPREF1058_RS01640 -2.7 -13.0 BamA/TamA family outer membrane protein compare
HMPREF1058_RS03530 -2.6 -1.8 PD-(D/E)XK nuclease family protein compare
HMPREF1058_RS04050 -2.6 -2.6 protein BatD compare
HMPREF1058_RS17955 -2.6 -7.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
HMPREF1058_RS10835 -2.6 -7.1 UDP-galactopyranose mutase compare
HMPREF1058_RS12795 -2.6 -3.5 CYTH domain-containing protein compare
HMPREF1058_RS06565 -2.6 -5.2 phosphate signaling complex protein PhoU compare
HMPREF1058_RS02170 -2.6 -8.1 hypothetical protein compare
HMPREF1058_RS12505 -2.6 -9.3 RNA polymerase factor sigma-54 compare
HMPREF1058_RS06460 -2.5 -2.4 hypothetical protein compare
HMPREF1058_RS04445 -2.5 -1.4 porin family protein compare
HMPREF1058_RS16625 -2.5 -7.2 hypothetical protein compare
HMPREF1058_RS08295 -2.5 -7.2 ATP-dependent DNA helicase RecG compare
HMPREF1058_RS12110 -2.5 -8.4 biosynthetic arginine decarboxylase compare
HMPREF1058_RS17815 -2.5 -5.5 MFS transporter compare
HMPREF1058_RS05140 -2.5 -1.7 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HMPREF1058_RS17970 -2.4 -5.2 malonyl-ACP O-methyltransferase BioC compare
HMPREF1058_RS17760 -2.4 -2.8 YkgB family protein compare
HMPREF1058_RS16855 -2.4 -1.0 LPS export ABC transporter periplasmic protein LptC compare
HMPREF1058_RS17985 -2.3 -10.0 ATP-binding cassette domain-containing protein compare
HMPREF1058_RS00710 -2.3 -4.4 hypoxanthine phosphoribosyltransferase compare
HMPREF1058_RS02110 -2.3 -14.1 NADP-dependent malic enzyme compare
HMPREF1058_RS16620 -2.3 -9.2 GGGtGRT protein compare
HMPREF1058_RS10720 -2.3 -5.0 GH3 auxin-responsive promoter family protein compare
HMPREF1058_RS14225 -2.3 -6.9 polyprenyl synthetase family protein compare
HMPREF1058_RS14590 -2.2 -2.1 AraC family transcriptional regulator compare
HMPREF1058_RS17045 -2.2 -3.6 hypothetical protein compare
HMPREF1058_RS06410 -2.2 -3.6 elongation factor 4 compare
HMPREF1058_RS01800 -2.2 -4.3 crossover junction endodeoxyribonuclease RuvC compare
HMPREF1058_RS17150 -2.1 -11.5 S41 family peptidase compare
HMPREF1058_RS07065 -2.1 -8.6 OmpA family protein compare
HMPREF1058_RS00595 -2.1 -3.5 Holliday junction branch migration protein RuvA compare
HMPREF1058_RS09775 -2.1 -1.0 helix-turn-helix domain-containing protein compare
HMPREF1058_RS03270 -2.1 -1.8 flavodoxin family protein compare
HMPREF1058_RS17780 -2.0 -8.1 clostripain compare
HMPREF1058_RS15665 -2.0 -4.7 MFS transporter compare
HMPREF1058_RS06310 -2.0 -6.2 UDP-glucose 4-epimerase GalE compare
HMPREF1058_RS09680 -2.0 -2.7 site-specific tyrosine recombinase XerD compare
HMPREF1058_RS16695 -1.9 -6.5 phosphotransferase compare
HMPREF1058_RS15570 -1.9 -13.6 hypothetical protein compare
HMPREF1058_RS13965 -1.9 -1.8 hypothetical protein compare
HMPREF1058_RS06945 -1.9 -1.2 tRNA-Thr compare
HMPREF1058_RS12675 -1.9 -3.1 DUF488 family protein compare
HMPREF1058_RS06555 -1.9 -2.5 nucleotidyltransferase domain-containing protein compare
HMPREF1058_RS15575 -1.9 -5.7 DUF4421 domain-containing protein compare
HMPREF1058_RS18660 -1.8 -0.9 hypothetical protein compare
HMPREF1058_RS07040 -1.8 -7.2 tetratricopeptide repeat protein compare
HMPREF1058_RS20350 -1.8 -3.3 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Phocaeicola vulgatus CL09T03C04

For carbon source N-Acetyl-D-Glucosamine across organisms