Experiment set2S308 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoYLS4 with DMSO 7.5%

200 most detrimental genes:

  gene name fitness t score description  
DORF18707 +1.1 0.7 no description compare
DVU0300 +1.1 1.0 radical SAM domain protein (TIGR) compare
DVU1520 +1.0 1.3 hypothetical protein (TIGR) compare
DVU2191 +1.0 3.6 hypothetical protein (TIGR) compare
DVU0008 +1.0 0.6 hypothetical protein (TIGR) compare
DVU0802 +0.9 1.0 hypothetical protein (TIGR) compare
DVU0205 +0.9 2.7 hypothetical protein (TIGR) compare
DVU1421 +0.9 1.4 hypothetical protein (TIGR) compare
DVU2198 +0.9 0.7 hypothetical protein (TIGR) compare
DVU0620 +0.8 2.0 endoribonuclease, L-PSP family (TIGR) compare
DVU2915 +0.8 3.9 hypothetical protein (TIGR) compare
DORF7930 +0.8 1.1 no description compare
DVU1395 +0.7 1.5 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU1135 +0.7 1.3 conserved domain protein (TIGR) compare
DVU2957 +0.7 0.5 hypothetical protein (TIGR) compare
DVU2417 +0.7 3.2 SlyX protein (TIGR) compare
DVU1420 +0.6 1.0 Hpt domain protein (TIGR) compare
DVU2495 +0.6 1.8 thioesterase family protein (TIGR) compare
DORF10446 +0.6 3.7 SEED: FIG00604570: hypothetical protein compare
DVU1844 +0.6 0.4 septum formation initiator family protein (TIGR) compare
DVU1374 +0.6 2.9 conserved hypothetical protein (TIGR) compare
DVU0204 +0.6 2.1 lipoprotein, putative (TIGR) compare
DORF12467 +0.6 1.8 SEED: protein of unknown function DUF497 compare
DORF16094 +0.6 2.6 SEED: FIG00605483: hypothetical protein compare
DVU1145 +0.6 0.8 hypothetical protein (TIGR) compare
DVU2582 +0.6 1.9 transcriptional regulator, TetR family (TIGR) compare
DVU1226 +0.6 1.6 hypothetical protein (TIGR) compare
DVU2009 +0.6 0.8 conserved domain protein (TIGR) compare
DVU1748 +0.6 0.4 conserved hypothetical protein (TIGR) compare
DVU2166 +0.6 1.5 holin (TIGR) compare
DVU1704 +0.6 0.6 conserved hypothetical protein (TIGR) compare
DVU2510 +0.6 0.4 penicillin-binding protein (TIGR) compare
DVU1759 mopB +0.5 3.3 molybdenum-binding protein, HTH domain (TIGR) compare
DVU1567 +0.5 2.1 hypothetical protein (TIGR) compare
DVU2060 +0.5 1.2 hypothetical protein (TIGR) compare
DVU0618 +0.5 0.6 hypothetical protein (TIGR) compare
DVU0420 +0.5 0.7 hypothetical protein (TIGR) compare
DVU_tRNA-Arg-1 tRNA-Arg +0.5 1.1 tRNA with anticodon ACG for Arg (VIMSS-AUTO) compare
DVU0859 +0.5 2.9 hypothetical protein (TIGR) compare
DVU2631 +0.5 2.1 hypothetical protein (TIGR) compare
DVU1434 +0.5 0.5 hypothetical protein (TIGR) compare
DVU2081 +0.5 1.2 hypothetical protein (TIGR) compare
DVUA0067 +0.5 2.2 membrane protein, putative (TIGR) compare
DVU0754 +0.5 1.0 hypothetical protein (TIGR) compare
DORF39640 +0.5 2.3 SEED: Flp pilus assembly protein, pilin Flp compare
DVUA0144 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0511 +0.5 1.1 conserved hypothetical protein (TIGR) compare
DVU2325 merP +0.5 0.7 mercuric transport protein periplasmic component (TIGR) compare
DVU_tRNA-Leu-4 tRNA-Leu +0.5 0.8 tRNA with anticodon GAG for Leu (VIMSS-AUTO) compare
DVU2209 +0.5 2.3 conserved hypothetical protein (TIGR) compare
DVU2843 vsr +0.5 2.5 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU3177 +0.5 1.8 hypothetical protein (TIGR) compare
DVUA0031 +0.5 2.0 hypothetical protein (TIGR) compare
DVU0359 +0.5 2.5 HesB-like domain (TIGR) compare
DVU1506 +0.5 1.0 hypothetical protein (TIGR) compare
DVU2099 cooC-2 +0.5 1.7 carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) compare
DVU0033 +0.5 1.7 isochorismatase family protein (TIGR) compare
DVU1996 +0.5 1.4 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU2184 +0.5 1.6 DNA-binding domain, excisionase family (TIGR) compare
DVU0586 +0.5 1.6 hypothetical protein (TIGR) compare
DVU2647 +0.4 3.2 endoribonuclease, L-PSP family (TIGR) compare
DVUA0091 katA +0.4 2.4 catalase (TIGR) compare
DVU2846 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2007 +0.4 1.1 nuclease, putative (TIGR) compare
DVU0630 +0.4 1.5 hypothetical protein (TIGR) compare
DORF10286 +0.4 1.6 no description compare
DVU0733 +0.4 2.5 conserved hypothetical protein (TIGR) compare
DVU2420 +0.4 1.9 conserved hypothetical protein (TIGR) compare
DVU0145 +0.4 2.2 response regulator (TIGR) compare
DVU2132 +0.4 1.3 hypothetical protein (TIGR) compare
DORF35977 +0.4 2.0 no description compare
DVU0911 truA +0.4 2.2 tRNA pseudouridine synthase A (TIGR) compare
DVU1247 +0.4 2.0 hypothetical protein (TIGR) compare
DVU3218 pncA +0.4 2.0 pyrazinamidase/nicotinamidase (TIGR) compare
DORF7327 +0.4 1.7 no description compare
DVU1499 +0.4 2.1 hypothetical protein (TIGR) compare
DVU1373 divIVA +0.4 0.8 cell-division initiation protein DivIVA (TIGR) compare
DVU1601 +0.4 2.0 ATP-dependent Clp protease adaptor protein ClpS (TIGR) compare
DVU2423 +0.4 2.4 transcriptional regulator, putative (TIGR) compare
DVU0147 +0.4 1.8 lipoprotein, putative (TIGR) compare
DVU0502 +0.4 1.3 hypothetical protein (TIGR) compare
DVU0885 +0.4 2.5 amidohydrolase family protein (TIGR) compare
DVU0616 +0.4 1.3 hypothetical protein (TIGR) compare
DVU2794 +0.4 1.6 NADH:quinone oxidoreductase subunit RnfG (Shelley Haveman) compare
DVU0218 +0.4 2.1 tail protein, putative (TIGR) compare
DVU0067 +0.4 1.2 hypothetical protein (TIGR) compare
DVU2251 +0.4 2.2 DNA-binding protein (TIGR) compare
DVU2345 +0.4 1.1 hypothetical protein (TIGR) compare
DVU1162 +0.4 0.8 hypothetical protein (TIGR) compare
DORF43274 +0.4 1.5 no description compare
DVU0576 msrB +0.4 1.8 peptide methionine sulfoxide reductase MsrB (TIGR) compare
DVU1736 +0.4 2.1 hypothetical protein (TIGR) compare
DVU2115 +0.4 0.6 hypothetical protein (TIGR) compare
DVU2864 +0.4 0.9 hypothetical protein (TIGR) compare
DVU0206 +0.4 1.1 hypothetical protein (TIGR) compare
DVU1715 +0.4 3.0 hypothetical protein (TIGR) compare
DVU1098 +0.4 2.5 adenine specific DNA methyltransferase, putative (TIGR) compare
DVU0556 +0.4 0.3 ISDvu3, transposase OrfA (TIGR) compare
DVU1475 +0.4 1.2 PhoU family protein (TIGR) compare
DVU1070 rbsA +0.4 1.3 branched chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2283 +0.4 0.8 hypothetical protein (TIGR) compare
DVU1853 +0.4 0.5 hypothetical protein (TIGR) compare
DVU3008 +0.4 2.4 NeuB family protein (TIGR) compare
DVU1581 +0.4 1.5 hypothetical protein (TIGR) compare
DVU2454 +0.4 0.2 hypothetical protein (TIGR) compare
DVU0257 +0.4 0.6 acetyltransferase, GNAT family (TIGR) compare
DVU0174 +0.4 1.1 hypothetical protein (TIGR) compare
DVU3374 +0.3 2.2 permease, putative (TIGR) compare
DVU1104 +0.3 1.6 baseplate assembly protein, putative (TIGR) compare
DVU1099 +0.3 1.7 tail fiber assembly protein, putative (TIGR) compare
DVU1590 radA +0.3 1.9 DNA repair protein RadA (TIGR) compare
DVU2126 +0.3 1.2 hypothetical protein (TIGR) compare
DVU3009 +0.3 2.3 radical SAM domain protein (TIGR) compare
DVU2122 cpaF +0.3 2.0 type II/IV secretion system protein (TIGR) compare
DVU0215 +0.3 2.5 tail protein, putative (TIGR) compare
DVU2242 +0.3 1.9 asparaginase (EC 3.5.1.1) (from data) compare
DVU3006 spsF +0.3 2.2 polysaccharide biosynthesis protein/methyltransferase, putative (TIGR) compare
DVUA0117 escJ +0.3 1.6 type III secretion lipoprotein (TIGR) compare
DVU1716 +0.3 2.0 hypothetical protein (TIGR) compare
DVU3342 +0.3 2.3 hypothetical protein (TIGR) compare
DVU1938 +0.3 0.8 hypothetical protein (TIGR) compare
DVU0231 +0.3 1.6 hypothetical protein (TIGR) compare
DVU1892 +0.3 2.0 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2183 +0.3 0.4 hypothetical protein (TIGR) compare
DVU1595 cheR-1 +0.3 2.1 chemotaxis protein methyltransferase (TIGR) compare
DVU2023 +0.3 1.7 hypothetical protein (TIGR) compare
DVU0227 +0.3 0.9 conserved hypothetical protein (TIGR) compare
DVU2152 +0.3 1.8 hypothetical protein (TIGR) compare
DVUA0141 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1652 hit +0.3 1.2 HIT family protein (TIGR) compare
DVU2419 +0.3 1.9 conserved domain protein (TIGR) compare
DVU2342 +0.3 2.0 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU0551 livF +0.3 1.4 high-affinity branched-chain amino acid ABC transporter ATP-binding protein (TIGR) compare
DVU3304 +0.3 2.2 SEED: integral membrane sensor signal transduction histidine kinase compare
DVU2720 +0.3 1.5 hypothetical protein (TIGR) compare
DVU0454 +0.3 1.6 hypothetical protein (TIGR) compare
DVU0533 hmcD +0.3 0.3 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU1075 rnpA +0.3 0.2 ribonuclease P protein component (TIGR) compare
DVU1726 +0.3 0.4 hypothetical protein (TIGR) compare
DVUA0150 +0.3 1.6 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU3069 +0.3 2.3 conserved hypothetical protein TIGR00247 (TIGR) compare
DVU0592 cheW-1 +0.3 1.2 chemotaxis protein CheW (TIGR) compare
DVU1158 +0.3 0.5 hypothetical protein (TIGR) compare
DVU3111 +0.3 1.2 transcriptional regulator, Crp/Fnr family (TIGR) compare
DVU3312 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU0366 +0.3 2.1 5-formyltetrahydrofolate cyclo-ligase family protein (TIGR) compare
DVU2680 fld +0.3 0.8 flavodoxin, iron-repressed (Dmitry Rodionov) compare
DVU0407 rlpA +0.3 1.0 rare lipoprotein A family protein (TIGR) compare
DORF9585 +0.3 0.4 no description compare
DVU2090 +0.3 1.7 EF hand domain protein (TIGR) compare
DVU3223 aspB +0.3 1.8 aspartate aminotransferase (TIGR) compare
DVU2770 +0.3 1.3 response regulator (TIGR) compare
DVU0763 gdp +0.3 2.0 GGDEF domain protein (TIGR) compare
DVU1970 +0.3 1.7 response regulator (TIGR) compare
DVU1764 +0.3 0.9 conserved hypothetical protein (TIGR) compare
DVU1128 +0.3 1.5 lysozyme, putative (TIGR) compare
DVU2741 livG +0.3 1.5 high-affinity branched chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2960 ntrC +0.3 2.2 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0259 divK +0.3 1.1 DNA-binding response regulator (TIGR) compare
DVU0946 +0.3 1.0 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU3135 mdaB +0.3 1.4 flavodoxin-like fold domain protein (TIGR) compare
DVU3267 +0.3 1.5 hypothetical protein (TIGR) compare
DVU1682 +0.3 0.9 GAF domain protein (TIGR) compare
DVU1082 +0.3 0.8 3- 5 exonuclease domain protein (TIGR) compare
DVU0657 +0.3 0.4 heat shock protein, Hsp20 family (TIGR) compare
DVU0443 +0.3 1.7 exonuclease, putative (Keith Keller) compare
DVU0040 +0.3 2.1 hypothetical protein (TIGR) compare
DVU2796 b1627 +0.3 1.5 NADH:quinone oxidoreductase subunit RnfA (Shelley Haveman) compare
DVU3093 rdl +0.3 1.1 rubredoxin-like protein (TIGR) compare
DVU1670 +0.3 1.4 conserved hypothetical protein (TIGR) compare
DVUA0109 +0.3 1.4 type III secretion system chaperone, LcrH/SycD family (TIGR) compare
DVU2556 +0.3 1.4 hypothetical protein (TIGR) compare
DVU2567 lysX +0.3 0.7 predicted transcriptional regulator for lysine biosynthesis and transport (Dmitry Rodionov) compare
DVU3273 +0.3 0.5 conserved hypothetical protein (TIGR) compare
DVU2516 +0.3 1.8 CBS domain protein (TIGR) compare
DVU2853 +0.3 2.1 phage baseplate assembly protein V, putative (TIGR) compare
DVU0745 +0.3 1.2 ABC transporter, periplasmic substrate-binding protein (TIGR) compare
DVU0111 +0.3 1.8 response regulator (TIGR) compare
DVU0706 +0.3 1.0 membrane protein, putative (TIGR) compare
DVU0221 +0.3 1.1 tail fiber assembly protein, putative (TIGR) compare
DVU2096 +0.3 0.8 hypothetical protein (TIGR) compare
DVU3129 +0.3 0.8 hypothetical protein (TIGR) compare
DVU2999 +0.3 1.3 methionyl-tRNA formyltransferase, putative (TIGR) compare
DVU3002 +0.3 1.9 conserved domain protein (TIGR) compare
DVU3049 +0.3 0.9 hemerythrin family protein (TIGR) compare
DVU0794 fabI +0.3 0.7 enoyl-(acyl-carrier-protein) reductase (TIGR) compare
DVU0428 +0.3 0.9 conserved hypothetical protein (TIGR) compare
DORF17147 +0.3 1.0 SEED: TPR domain protein compare
DVU1026 uraA +0.3 2.2 uracil permease (TIGR) compare
DVUA0119 sctN +0.3 1.9 type III secretion system ATPase (TIGR) compare
DVU1377 ilvN-2 +0.3 0.3 acetolactate synthase, small subunit (TIGR) compare
DVU0029 +0.3 1.8 hydantoinase/oxoprolinase family protein (TIGR) compare
DVU1127 +0.3 1.4 hypothetical protein (TIGR) compare
DVUA0028 +0.3 0.9 hypothetical protein (TIGR) compare
DVU2752 +0.3 1.0 rhodanese-like domain protein (TIGR) compare
DVU2333 ndk +0.3 1.6 nucleoside diphosphate kinase (TIGR) compare
DVU3018 +0.3 1.8 radical SAM domain protein (TIGR) compare
DVU1220 +0.3 1.7 nitroreductase family protein (TIGR) compare
DVU1955 +0.3 1.7 TPR domain protein (TIGR) compare
DVU0989 +0.3 1.1 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare


Specific Phenotypes

For 2 genes in this experiment

For stress Dimethyl Sulfoxide in Desulfovibrio vulgaris Hildenborough JW710

For stress Dimethyl Sulfoxide across organisms