Experiment set2S296 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoYLS4 with Spectinomycin 0.025 mg/mL

200 most detrimental genes:

  gene name fitness t score description  
DVU2865 +1.2 1.7 lipoprotein, putative (TIGR) compare
DVU0793 +1.0 2.2 hypothetical protein (TIGR) compare
DVU2957 +1.0 0.9 hypothetical protein (TIGR) compare
DVU1726 +1.0 1.5 hypothetical protein (TIGR) compare
DVU2045 +0.8 4.3 hypothetical protein (TIGR) compare
DVU1024 rluD/coaE +0.8 4.1 ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) compare
DVU_tRNA-Arg-1 tRNA-Arg +0.8 2.1 tRNA with anticodon ACG for Arg (VIMSS-AUTO) compare
DVU1518 +0.7 1.3 transcriptional regulator cI, truncation (TIGR) compare
DVU1420 +0.7 1.3 Hpt domain protein (TIGR) compare
DVU1158 +0.7 1.2 hypothetical protein (TIGR) compare
DORF10446 +0.7 4.2 SEED: FIG00604570: hypothetical protein compare
DVU2325 merP +0.7 1.2 mercuric transport protein periplasmic component (TIGR) compare
DORF19331 +0.7 2.9 no description compare
DVU2454 +0.7 0.5 hypothetical protein (TIGR) compare
DVU0043 fliQ +0.6 3.7 flagellar biosynthetic protein FliQ (TIGR) compare
DVU2200 +0.6 0.8 hypothetical protein (TIGR) compare
DVU1863 +0.6 3.6 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU2867 +0.6 0.8 holin (TIGR) compare
DVU3364 +0.6 3.2 conserved hypothetical protein (TIGR) compare
DVU0227 +0.6 2.9 conserved hypothetical protein (TIGR) compare
DVU_tRNA-Leu-4 tRNA-Leu +0.6 1.5 tRNA with anticodon GAG for Leu (VIMSS-AUTO) compare
DVU1557 +0.6 1.7 hypothetical protein (TIGR) compare
DVU0401 +0.6 1.4 hypothetical protein (TIGR) compare
DVU1257 +0.6 2.3 RNA-binding protein (TIGR) compare
DORF24435 +0.6 1.2 SEED: Sll1863 protein compare
DVU1933 +0.5 0.6 peptidase, PfpI family (TIGR) compare
DVU0047 +0.5 3.2 flagellar protein FliL (TIGR) compare
DVU0502 +0.5 1.9 hypothetical protein (TIGR) compare
DVU0493 +0.5 1.4 hypothetical protein (TIGR) compare
DVU0443 +0.5 2.6 exonuclease, putative (Keith Keller) compare
DVU1449 +0.5 1.7 anti-anti-sigma factor, putative (TIGR) compare
DVU1403 cobO +0.5 2.3 cob(I)alamin adenosyltransferase (TIGR) compare
DVU2894 flrA +0.5 3.8 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2863 +0.5 0.7 hypothetical protein (TIGR) compare
DVU2441 hspC +0.5 1.1 heat shock protein, Hsp20 family (TIGR) compare
DORF7930 +0.5 1.2 no description compare
DVU0378 +0.5 1.2 thioredoxin, putative (TIGR) compare
DVU0595 +0.5 1.3 conserved hypothetical protein (TIGR) compare
DVU0286 hisF +0.5 1.6 imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) compare
DVU1029 hisC +0.5 1.1 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
DVU2847 +0.5 2.1 hypothetical protein (TIGR) compare
DVU2669 +0.5 1.1 conserved domain protein (TIGR) compare
DVU1148 +0.5 0.9 conserved hypothetical protein (TIGR) compare
DVU2760 +0.5 1.6 hypothetical protein (TIGR) compare
DVU1084 pstB-1 +0.5 3.9 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU1931 +0.5 1.1 iron-sulfur cluster-binding protein (TIGR) compare
DVU3149 sppA +0.5 2.3 signal peptide peptidase SppA, 36K type (TIGR) compare
DVU2021 +0.5 1.9 hypothetical protein (TIGR) compare
DVU1859 +0.5 1.3 hypothetical protein (TIGR) compare
DVU1162 +0.5 1.1 hypothetical protein (TIGR) compare
DVU2877 +0.5 2.9 hypothetical protein (TIGR) compare
DORF9585 +0.5 0.7 no description compare
DVU2961 +0.5 2.0 hypothetical protein (TIGR) compare
DORF41147 +0.5 0.6 no description compare
DVU1265 +0.4 2.9 hypothetical protein (TIGR) compare
DVU1632 +0.4 2.7 PTS system, IIA component (TIGR) compare
DVU1658 +0.4 1.6 transaldolase, putative (TIGR) compare
DVU0511 +0.4 1.2 conserved hypothetical protein (TIGR) compare
DVU2462 +0.4 2.5 oligopeptide ABC transporter, permease protein (TIGR) compare
DVU1033 cinA +0.4 0.5 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU2251 +0.4 1.7 DNA-binding protein (TIGR) compare
DVU2864 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1475 +0.4 1.2 PhoU family protein (TIGR) compare
DVU0455 +0.4 1.9 hypothetical protein (TIGR) compare
DVU1275 +0.4 2.8 hypothetical protein (TIGR) compare
DVU0057 +0.4 1.8 transcriptional regulator, TetR family (TIGR) compare
DVU2871 +0.4 2.2 minor capsid protein C (TIGR) compare
DVU1067 +0.4 2.5 membrane protein, Bmp family (TIGR) compare
DVU0946 +0.4 2.0 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU0937 +0.4 2.4 hypothetical protein (TIGR) compare
DVU2966 +0.4 2.9 response regulator (TIGR) compare
DVU0864 +0.4 1.1 glycoprotease family protein, putative (TIGR) compare
DVU1179 aor +0.4 2.9 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DVU2576 +0.4 3.3 oligopeptide ABC transporter, ATP-binding protein (TIGR) compare
DVU2510 +0.4 0.3 penicillin-binding protein (TIGR) compare
DVU2479 pstA-2 +0.4 2.7 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU2712 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1611 +0.4 2.0 molybdopterin oxidoreductase domain protein (TIGR) compare
DVU1810 +0.4 1.8 hypothetical protein (TIGR) compare
DVU3280 +0.4 2.8 peptide ABC transporter, ATP-binding protein, authentic frameshift (TIGR) compare
DVU1908 pdxJ +0.4 0.7 pyridoxal phosphate biosynthetic protein PdxJ (TIGR) compare
DVU1460 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1938 +0.4 0.8 hypothetical protein (TIGR) compare
DVU1900 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DVU0034 +0.4 3.0 DSBA-like thioredoxin domain protein (TIGR) compare
DVU0045 +0.4 2.2 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU2338 +0.4 1.1 DNA repair protein, HhH-GPD family (TIGR) compare
DVU2099 cooC-2 +0.4 1.4 carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) compare
DVU2960 ntrC +0.4 2.9 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2556 +0.4 1.2 hypothetical protein (TIGR) compare
DVU0451 +0.4 2.6 chloride channel family protein (TIGR) compare
DVU0163 +0.4 1.5 lipoprotein, putative (TIGR) compare
DVU1007 cobU +0.4 2.0 cobinamide kinase/cobinamide phosphate guanylyltransferase (TIGR) compare
DVU1736 +0.4 2.3 hypothetical protein (TIGR) compare
DVU1274 +0.4 2.4 hypothetical protein (TIGR) compare
DVU1175 +0.4 0.7 hypothetical protein (TIGR) compare
DVU3274 +0.4 1.6 hypothetical protein (TIGR) compare
DVU0359 +0.4 2.4 HesB-like domain (TIGR) compare
DVU0533 hmcD +0.4 0.5 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU2843 vsr +0.4 2.4 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU3393 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1153 +0.4 1.3 hypothetical protein (TIGR) compare
DVU1470 ppiC +0.4 0.8 peptidyl-prolyl cis-trans isomerase C (TIGR) compare
DVU2167 +0.4 1.5 hypothetical protein (TIGR) compare
DVU1271 +0.3 2.7 general secretion pathway protein F, putative (TIGR) compare
DORF13021 +0.3 0.8 no description compare
DVU1294 +0.3 1.5 conserved hypothetical protein (TIGR) compare
DVU2684 +0.3 1.0 hypothetical protein (TIGR) compare
DVUA0067 +0.3 1.1 membrane protein, putative (TIGR) compare
DVU1359 +0.3 2.5 hypothetical protein (TIGR) compare
DVU1614 +0.3 1.1 iron-sulfur cluster-binding protein (TIGR) compare
DVU0285 hisH +0.3 1.9 IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) compare
DVU2809 +0.3 2.3 cytochrome c3 (TIGR) compare
DVU0376 +0.3 0.5 hypothetical protein (TIGR) compare
DVU1268 +0.3 1.7 hypothetical protein (TIGR) compare
DVU2009 +0.3 0.8 conserved domain protein (TIGR) compare
DVU2577 +0.3 1.7 DNA-binding response regulator, LuxR family (TIGR) compare
DVU0923 +0.3 2.1 endoribonuclease, L-PSP family (TIGR) compare
DVU2023 +0.3 1.8 hypothetical protein (TIGR) compare
DVU2915 +0.3 1.3 hypothetical protein (TIGR) compare
DVU1441 flaB1 +0.3 1.7 flagellin (TIGR) compare
DVU1944 oorD +0.3 1.2 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU2187 +0.3 1.8 hypothetical protein (TIGR) compare
DVU2287 +0.3 0.4 hydrogenase, CooK subunit, selenocysteine-containing, putative (TIGR) compare
DVU1128 +0.3 1.8 lysozyme, putative (TIGR) compare
DVU1567 +0.3 1.4 hypothetical protein (TIGR) compare
DVU0830 ptsH +0.3 0.7 phosphocarrier protein HPr (TIGR) compare
DVU2608 motA-3 +0.3 2.0 chemotaxis protein MotA (TIGR) compare
DVU0915 +0.3 1.7 conserved hypothetical protein (TIGR) compare
DVU2210 +0.3 2.6 TPR domain protein (TIGR) compare
DVU2838 +0.3 1.2 conserved hypothetical protein (TIGR) compare
DVU2212 +0.3 2.2 conserved hypothetical protein (TIGR) compare
DVU3054 +0.3 1.9 radical SAM domain protein (TIGR) compare
DVU2477 pstS +0.3 2.2 phosphate ABC transporter, periplasmic phosphate-binding protein, putative (TIGR) compare
DVU2107 +0.3 1.3 hypothetical protein (TIGR) compare
DVU3188 +0.3 1.9 NLP/P60 family protein (TIGR) compare
DVU0966 +0.3 2.3 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU2852 +0.3 1.0 tail protein, putative (TIGR) compare
DVU1499 +0.3 1.1 hypothetical protein (TIGR) compare
DVU1030 +0.3 1.0 universal stress protein family (TIGR) compare
DVU0410 +0.3 2.3 hypothetical protein (TIGR) compare
DVU1682 +0.3 0.9 GAF domain protein (TIGR) compare
DVU2354 +0.3 2.5 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1272 gspE +0.3 2.6 general secretion pathway protein E, putative (TIGR) compare
DVU1013 +0.3 2.3 type I secretion outer membrane protein, TolC family (TIGR) compare
DVU0664 +0.3 1.6 cysteine desulfurase (TIGR) compare
DVU0649 +0.3 1.7 iron compound ABC transporter, permease protein (TIGR) compare
DORF10286 +0.3 1.9 no description compare
DVU0816 cobQ +0.3 2.3 cobyric acid synthase CobQ (TIGR) compare
DVU2650 +0.3 0.9 hypothetical protein (TIGR) compare
DVU2866 +0.3 0.9 conserved hypothetical protein (TIGR) compare
DVU1715 +0.3 1.8 hypothetical protein (TIGR) compare
DVUA0090 +0.3 1.5 membrane protein, putative (TIGR) compare
DVU1775 ribB +0.3 1.6 3,4-dihydroxy-2-butanone 4-phosphate synthase (TIGR) compare
DVU0527 maF +0.3 1.6 septum formation protein Maf (TIGR) compare
DVU2308 +0.3 2.2 conserved hypothetical protein TIGR00022 (TIGR) compare
DVU0698 rfbC +0.3 1.5 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU1529 +0.3 1.8 decarboxylase family protein (TIGR) compare
DVU3069 +0.3 2.4 conserved hypothetical protein TIGR00247 (TIGR) compare
DVU1934 phnE +0.3 2.1 phosphonate ABC transporter, permease protein (TIGR) compare
DVU1276 +0.3 2.5 hypothetical protein (TIGR) compare
DVU2795 nqr4 +0.3 1.2 NADH:quinone oxidoreductase subunit RnfE (Shelley Haveman) compare
DVU1646 arsC +0.3 1.8 arsenate reductase (TIGR) compare
DVU1430 +0.3 2.5 peptidase, M16 family (TIGR) compare
DVU1489 +0.3 0.7 hypothetical protein (TIGR) compare
DVU3219 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1471 hspC +0.3 1.5 heat shock protein, Hsp20 family (TIGR) compare
DVU2714 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU2166 +0.3 0.6 holin (TIGR) compare
DVU2012 +0.3 0.3 hypothetical protein (TIGR) compare
DVU2024 +0.3 1.7 conserved hypothetical protein (TIGR) compare
DVU0195 +0.3 1.5 hypothetical protein (TIGR) compare
DVU3177 +0.3 1.1 hypothetical protein (TIGR) compare
DVU1038 hisA +0.3 0.6 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (TIGR) compare
DVU1226 +0.3 0.8 hypothetical protein (TIGR) compare
DORF28911 +0.3 1.6 SEED: FIG00602256: hypothetical protein compare
DVU2269 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0078 +0.3 1.2 conserved hypothetical protein (TIGR) compare
DVU0146 +0.3 1.8 hypothetical protein (TIGR) compare
DVU0033 +0.3 0.9 isochorismatase family protein (TIGR) compare
DVU0592 cheW-1 +0.3 1.1 chemotaxis protein CheW (TIGR) compare
DVU2575 +0.3 2.0 peptidase, M20/M25/M40 family (TIGR) compare
DVU2245 +0.3 1.1 mutT/nudix family protein (TIGR) compare
DVU0048 +0.3 1.9 chemotaxis protein MotB (TIGR) compare
DVU2598 +0.3 1.1 hypothetical protein (TIGR) compare
DVU1123 +0.3 1.7 conserved domain protein (TIGR) compare
DVU2648 +0.3 1.2 hypothetical protein (TIGR) compare
DVU2461 appB +0.3 1.8 oligopeptide ABC transporter, permease protein (TIGR) compare
DVUA0115 +0.3 1.7 type III secretion system protein, YscF family (TIGR) compare
DVU1238 +0.3 1.5 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU2474 +0.3 0.8 hypothetical protein (TIGR) compare
DVU1408 +0.3 1.3 hypothetical protein (TIGR) compare
DVU0952 +0.3 1.8 conserved hypothetical protein TIGR00282 (TIGR) compare
DVU2160 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1947 oorC +0.3 0.8 pyruvate ferredoxin oxidoreductase, gamma subunit, putative (TIGR) compare
DVU1791 +0.3 0.6 GatB/Yqey family protein (TIGR) compare
DVU2787 +0.3 0.9 conserved domain protein (TIGR) compare
DVU1253 +0.3 0.9 hypothetical protein (TIGR) compare
DVU1708 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU0722 +0.3 1.5 response regulator (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment

For stress Spectinomycin dihydrochloride pentahydrate in Desulfovibrio vulgaris Hildenborough JW710

For stress Spectinomycin dihydrochloride pentahydrate across organisms