Experiment set2S295 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoYLS4 with Spectinomycin 0.025 mg/mL

200 most detrimental genes:

  gene name fitness t score description  
DORF18707 +1.2 0.9 no description compare
DVU0793 +0.9 1.6 hypothetical protein (TIGR) compare
DVU0300 +0.8 0.9 radical SAM domain protein (TIGR) compare
DVU1145 +0.8 1.4 hypothetical protein (TIGR) compare
DVU2510 +0.7 0.6 penicillin-binding protein (TIGR) compare
DORF10446 +0.7 3.4 SEED: FIG00604570: hypothetical protein compare
DVU2012 +0.7 0.9 hypothetical protein (TIGR) compare
DVU0891 +0.7 3.4 aminotransferase, classes I and II (TIGR) compare
DVU2867 +0.7 1.0 holin (TIGR) compare
DVU2462 +0.7 3.7 oligopeptide ABC transporter, permease protein (TIGR) compare
DVU1257 +0.7 3.0 RNA-binding protein (TIGR) compare
DVU2009 +0.7 1.1 conserved domain protein (TIGR) compare
DVUA0081 +0.7 1.7 glycosyl transferase, group 1/2 family protein (TIGR) compare
DVU1632 +0.6 3.4 PTS system, IIA component (TIGR) compare
DORF831 +0.6 0.8 SEED: FIG00602593: hypothetical protein compare
DVU1933 +0.6 0.7 peptidase, PfpI family (TIGR) compare
DVU2045 +0.6 3.1 hypothetical protein (TIGR) compare
DVU2441 hspC +0.6 1.3 heat shock protein, Hsp20 family (TIGR) compare
DVU0043 fliQ +0.6 2.7 flagellar biosynthetic protein FliQ (TIGR) compare
DVU2176 +0.6 1.2 hypothetical protein (TIGR) compare
DVU0794 fabI +0.6 2.0 enoyl-(acyl-carrier-protein) reductase (TIGR) compare
DVU2669 +0.6 1.3 conserved domain protein (TIGR) compare
DVU3215 drrA +0.6 0.8 response regulator (TIGR) compare
DVU3022 +0.6 0.4 sensory box histidine kinase/response regulator (TIGR) compare
DVU1170 +0.6 0.7 hypothetical protein (TIGR) compare
DVU0034 +0.5 3.2 DSBA-like thioredoxin domain protein (TIGR) compare
DVU1403 cobO +0.5 2.8 cob(I)alamin adenosyltransferase (TIGR) compare
DVU1863 +0.5 3.4 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU1024 rluD/coaE +0.5 2.0 ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) compare
DVU1247 +0.5 3.2 hypothetical protein (TIGR) compare
DVU1148 +0.5 1.3 conserved hypothetical protein (TIGR) compare
DVU2847 +0.5 2.2 hypothetical protein (TIGR) compare
DVU2166 +0.5 1.5 holin (TIGR) compare
DVU0555 +0.5 0.6 hypothetical protein (TIGR) compare
DVU3069 +0.5 4.3 conserved hypothetical protein TIGR00247 (TIGR) compare
DORF7930 +0.5 1.8 no description compare
DVU2712 +0.5 1.7 hypothetical protein (TIGR) compare
DVU2787 +0.5 1.9 conserved domain protein (TIGR) compare
DVU3177 +0.5 3.2 hypothetical protein (TIGR) compare
DVU1499 +0.5 2.8 hypothetical protein (TIGR) compare
DORF9585 +0.5 0.7 no description compare
DVU2915 +0.5 3.3 hypothetical protein (TIGR) compare
DVU0008 +0.5 0.3 hypothetical protein (TIGR) compare
DVU1630 ptsN +0.5 1.0 PTS system, IIA component (TIGR) compare
DVU2843 vsr +0.5 2.0 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU2960 ntrC +0.5 4.1 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU1421 +0.5 1.9 hypothetical protein (TIGR) compare
DVU1690 +0.5 1.0 transcriptional regulator, TetR family (TIGR) compare
DVU2577 +0.5 1.5 DNA-binding response regulator, LuxR family (TIGR) compare
DVU0816 cobQ +0.5 3.9 cobyric acid synthase CobQ (TIGR) compare
DVU1961 cheW-3 +0.5 1.1 chemotaxis protein CheW (TIGR) compare
DVU0047 +0.5 2.4 flagellar protein FliL (TIGR) compare
DVU1359 +0.5 2.9 hypothetical protein (TIGR) compare
DVU1479 +0.5 0.3 conserved hypothetical protein (TIGR) compare
DVU0787 +0.5 0.7 hypothetical protein (TIGR) compare
DVU1449 +0.5 1.9 anti-anti-sigma factor, putative (TIGR) compare
DORF8571 +0.5 1.0 SEED: FIG00603598: hypothetical protein compare
DVU2212 +0.5 2.2 conserved hypothetical protein (TIGR) compare
DVU3325 +0.4 1.0 hypothetical protein (TIGR) compare
DVU3318 +0.4 1.5 hypothetical protein (TIGR) compare
DORF12467 +0.4 1.4 SEED: protein of unknown function DUF497 compare
DVU1715 +0.4 2.5 hypothetical protein (TIGR) compare
DVU2287 +0.4 0.5 hydrogenase, CooK subunit, selenocysteine-containing, putative (TIGR) compare
DVU0429 +0.4 1.7 Ech hydrogenase, subunit EchF, putative (TIGR) compare
DVU1039 +0.4 1.9 lipoprotein, putative (TIGR) compare
DVU2670 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2809 +0.4 2.3 cytochrome c3 (TIGR) compare
DVU2292 hypA +0.4 0.5 hydrogenase nickel insertion protein HypA (TIGR) compare
DVU1460 +0.4 0.9 hypothetical protein (TIGR) compare
DVUA0101 flhB +0.4 2.2 type III secretion protein, hrpY/hrcU family (TIGR) compare
DVU2894 flrA +0.4 2.5 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2132 +0.4 0.8 hypothetical protein (TIGR) compare
DVU3129 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2609 +0.4 2.3 chemotaxis MotB protein, putative (TIGR) compare
DVU1265 +0.4 2.3 hypothetical protein (TIGR) compare
DVU1679 idi +0.4 0.6 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU2512 mraW +0.4 1.4 S-adenosyl-methyltransferase MraW (TIGR) compare
DVU2016 +0.4 0.8 GGDEF domain protein (TIGR) compare
DVU1179 aor +0.4 2.9 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DVU2479 pstA-2 +0.4 2.7 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU1276 +0.4 3.3 hypothetical protein (TIGR) compare
DVU1162 +0.4 1.0 hypothetical protein (TIGR) compare
DVUA0084 +0.4 0.6 transcriptional regulator, AbrB family (TIGR) compare
DVU1589 +0.4 2.1 hypothetical protein (TIGR) compare
DVU1971 +0.4 2.4 conserved domain protein (TIGR) compare
DVU1268 +0.4 2.3 hypothetical protein (TIGR) compare
DVU0502 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2957 +0.4 0.3 hypothetical protein (TIGR) compare
DVU1475 +0.4 1.4 PhoU family protein (TIGR) compare
DVU0620 +0.4 0.8 endoribonuclease, L-PSP family (TIGR) compare
DVU1084 pstB-1 +0.4 2.4 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU2697 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1033 cinA +0.4 0.5 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU1938 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2020 +0.4 2.9 conserved hypothetical protein (TIGR) compare
DVU2659 +0.4 1.0 exsB protein (TIGR) compare
DVU1557 +0.4 1.0 hypothetical protein (TIGR) compare
DVU3193 +0.4 2.0 DNA-binding domain, excisionase family (TIGR) compare
DVU0796 hisD +0.4 1.0 histidinol dehydrogenase (TIGR) compare
DVU0592 cheW-1 +0.4 2.2 chemotaxis protein CheW (TIGR) compare
DVU2187 +0.4 1.5 hypothetical protein (TIGR) compare
DVUA0090 +0.4 2.5 membrane protein, putative (TIGR) compare
DVU1646 arsC +0.4 0.9 arsenate reductase (TIGR) compare
DVU0045 +0.4 3.0 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0864 +0.4 1.1 glycoprotease family protein, putative (TIGR) compare
DVU2608 motA-3 +0.4 2.4 chemotaxis protein MotA (TIGR) compare
DVU0130 +0.4 1.7 phosphoglycolate phosphatase, putative (TIGR) compare
DVU1537 +0.4 1.3 lipoprotein, putative (TIGR) compare
DVU0382 +0.4 1.2 hypothetical protein (TIGR) compare
DVU0698 rfbC +0.4 2.5 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU0001 dnaA-1 +0.4 1.4 chromosomal replication initiator protein DnaA (TIGR) compare
DVUA0067 +0.4 1.9 membrane protein, putative (TIGR) compare
DVU1796 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1260 +0.4 2.5 outer membrane protein P1, putative (TIGR) compare
DVU2838 +0.4 1.6 conserved hypothetical protein (TIGR) compare
DVU2859 +0.4 1.4 tail sheath protein, putative (TIGR) compare
DVU2961 +0.4 1.1 hypothetical protein (TIGR) compare
DVU1986 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU2021 +0.4 1.9 hypothetical protein (TIGR) compare
DVU2971 +0.4 2.1 glycosyl transferase, family 8 (TIGR) compare
DORF46408 +0.3 1.0 no description compare
DVU2051 +0.3 1.1 hypothetical protein (TIGR) compare
DVU0032 +0.3 1.9 conserved hypothetical protein (TIGR) compare
DVU1135 +0.3 0.9 conserved domain protein (TIGR) compare
DVU0946 +0.3 1.2 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU0817 +0.3 1.6 hypothetical protein (TIGR) compare
DVU1759 mopB +0.3 1.3 molybdenum-binding protein, HTH domain (TIGR) compare
DVU1218 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU1629 yfiA +0.3 1.2 ribosomal subunit interface protein (TIGR) compare
DVU1271 +0.3 2.4 general secretion pathway protein F, putative (TIGR) compare
DVU1631 +0.3 1.9 conserved hypothetical protein (TIGR) compare
DVU2877 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1275 +0.3 2.0 hypothetical protein (TIGR) compare
DORF10286 +0.3 2.0 no description compare
DVU2600 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1408 +0.3 2.0 hypothetical protein (TIGR) compare
DVU1744 +0.3 1.7 DNA-binding protein (TIGR) compare
DVU2198 +0.3 0.3 hypothetical protein (TIGR) compare
DVU1188 +0.3 0.7 hypothetical protein (TIGR) compare
DVU2703 +0.3 0.4 hypothetical protein (TIGR) compare
DVU0746 cysW +0.3 1.9 ABC transporter, permease protein (TIGR) compare
DVU3009 +0.3 2.3 radical SAM domain protein (TIGR) compare
DVU1192 acyP +0.3 1.4 acylphosphatase (TIGR) compare
DVU2840 +0.3 1.0 conserved hypothetical protein (TIGR) compare
DVU2283 +0.3 0.7 hypothetical protein (TIGR) compare
DVU0303 +0.3 1.2 hypothetical protein (TIGR) compare
DVU3260 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2354 +0.3 2.4 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2470 b0786 +0.3 1.5 membrane protein, putaive (TIGR) compare
DVU2808 +0.3 1.3 TonB domain protein (TIGR) compare
DVU2866 +0.3 1.4 conserved hypothetical protein (TIGR) compare
DVU2619 +0.3 1.3 conserved hypothetical protein (TIGR) compare
DVU0965 +0.3 0.4 hypothetical protein (TIGR) compare
DVU2007 +0.3 0.9 nuclease, putative (TIGR) compare
DORF702 +0.3 0.8 no description compare
DVU0204 +0.3 1.3 lipoprotein, putative (TIGR) compare
DVU1607 +0.3 2.3 hypothetical protein (TIGR) compare
DVU2209 +0.3 2.5 conserved hypothetical protein (TIGR) compare
DVU0316 flgB +0.3 0.7 flagellar basal-body rod protein FlgB (TIGR) compare
DORF15105 +0.3 1.9 no description compare
DVU0657 +0.3 0.8 heat shock protein, Hsp20 family (TIGR) compare
DVU0454 +0.3 1.9 hypothetical protein (TIGR) compare
DVU1441 flaB1 +0.3 1.3 flagellin (TIGR) compare
DVU2028 +0.3 1.8 conserved domain protein (TIGR) compare
DVU2345 +0.3 0.9 hypothetical protein (TIGR) compare
DVU1745 +0.3 1.8 DNA-binding protein (TIGR) compare
DVU1266 +0.3 2.3 hypothetical protein (TIGR) compare
DVU2649 +0.3 0.7 hypothetical protein (TIGR) compare
DVU2749 cobL +0.3 2.1 precorrin-6Y C5,15-methyltransferase (decarboxylating) (TIGR) compare
DVU0715 livG +0.3 1.3 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU1069 +0.3 1.8 branched chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1222 +0.3 1.0 hypothetical protein (TIGR) compare
DVU1273 +0.3 1.9 bacterial type II/III secretion system protein (TIGR) compare
DVU2251 +0.3 1.1 DNA-binding protein (TIGR) compare
DVU1143 +0.3 1.1 hypothetical protein (TIGR) compare
DVU0113 hisI +0.3 0.6 phosphoribosyl-AMP cyclohydrolase (TIGR) compare
DVU1153 +0.3 1.1 hypothetical protein (TIGR) compare
DVU2910 +0.3 1.4 membrane protein, putative (TIGR) compare
DVU0576 msrB +0.3 1.3 peptide methionine sulfoxide reductase MsrB (TIGR) compare
DVU1228 tpX +0.3 1.7 thiol peroxidase (TIGR) compare
DVU2770 +0.3 1.4 response regulator (TIGR) compare
DVU2871 +0.3 1.3 minor capsid protein C (TIGR) compare
DVU0951 moeA-2 +0.3 1.1 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU1142 +0.3 1.1 transcriptional regulator, putative (TIGR) compare
DVU0649 +0.3 1.5 iron compound ABC transporter, permease protein (TIGR) compare
DVU1106 +0.3 1.6 hypothetical protein (TIGR) compare
DVU1548 +0.3 1.3 outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) compare
DVU2296 mtgA +0.3 1.5 monofunctional biosynthetic peptidoglycan transglycosylase (TIGR) compare
DVU0914 cobS +0.3 0.9 cobalamin-5-phosphate synthase (TIGR) compare
DVU0577 +0.3 2.1 formate dehydrogenase formation protein FdhE, putative (TIGR) compare
DVU0689 rnhA +0.3 0.4 ribonuclease HI (TIGR) compare
DVU0584 +0.3 1.9 transposase, putative (TIGR) compare
DVU0198 +0.3 1.2 minor capsid protein C, degenerate (TIGR) compare
DVU2165 +0.3 2.1 lysozyme, putative (TIGR) compare
DVU0272 +0.3 1.1 hypothetical protein (TIGR) compare
DVU2326 +0.3 1.6 conserved domain protein (TIGR) compare
DVU1389 +0.3 0.8 hypothetical protein (TIGR) compare
DVU1813 +0.3 1.6 hypothetical protein (TIGR) compare
DVU0364 pabA +0.3 1.8 para-aminobenzoate/anthranilate synthase glutamine amidotransferase (TIGR) compare
DVU1518 +0.3 0.7 transcriptional regulator cI, truncation (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in stress experiments

For stress Spectinomycin dihydrochloride pentahydrate across organisms