Experiment set2S176 for Lysobacter sp. OAE881

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media

200 most detrimental genes:

  gene name fitness t score description  
ABIE51_RS10285 +1.0 1.8 SDR family oxidoreductase compare
ABIE51_RS14860 +0.8 1.8 VOC family protein compare
ABIE51_RS15410 +0.8 1.3 FHA domain-containing protein compare
ABIE51_RS13685 +0.7 1.4 transglutaminase domain-containing protein compare
ABIE51_RS13050 +0.7 1.1 hypothetical protein compare
ABIE51_RS05310 +0.7 1.2 ABC transporter ATP-binding protein compare
ABIE51_RS00255 +0.7 1.0 YkgJ family cysteine cluster protein compare
ABIE51_RS06095 +0.6 3.5 class III extradiol ring-cleavage dioxygenase compare
ABIE51_RS16970 +0.6 1.0 sensor histidine kinase compare
ABIE51_RS06755 +0.6 2.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
ABIE51_RS04265 +0.6 4.7 OmpA family protein compare
ABIE51_RS14290 +0.6 4.0 cation diffusion facilitator family transporter compare
ABIE51_RS09235 +0.6 1.0 hypothetical protein compare
ABIE51_RS06715 +0.6 1.1 DUF998 domain-containing protein compare
ABIE51_RS07870 +0.6 0.8 hypothetical protein compare
ABIE51_RS04260 +0.6 3.1 DUF4398 domain-containing protein compare
ABIE51_RS13800 +0.6 2.4 cold-shock protein compare
ABIE51_RS14570 +0.6 2.6 DNA-3-methyladenine glycosylase compare
ABIE51_RS10930 +0.6 0.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE51_RS06960 +0.6 5.0 TonB-dependent receptor compare
ABIE51_RS14715 +0.5 1.6 efflux RND transporter permease subunit compare
ABIE51_RS13550 +0.5 1.6 tRNA-Ala compare
ABIE51_RS09815 +0.5 1.2 YaeQ family protein compare
ABIE51_RS09120 +0.5 3.1 DUF2939 domain-containing protein compare
ABIE51_RS00670 +0.5 1.4 hypothetical protein compare
ABIE51_RS01880 +0.5 1.5 pteridine-dependent deoxygenase compare
ABIE51_RS03810 +0.5 2.3 sulfite exporter TauE/SafE family protein compare
ABIE51_RS18250 +0.5 0.7 hypothetical protein compare
ABIE51_RS12100 +0.5 1.4 AprI/Inh family metalloprotease inhibitor compare
ABIE51_RS06355 +0.5 2.2 GNAT family N-acetyltransferase compare
ABIE51_RS06990 +0.5 1.5 Spx/MgsR family RNA polymerase-binding regulatory protein compare
ABIE51_RS02150 +0.5 1.5 sigma-70 region 4 domain-containing protein compare
ABIE51_RS10770 +0.5 1.0 OBAP family protein compare
ABIE51_RS14135 +0.5 0.7 tRNA-Val compare
ABIE51_RS10495 +0.4 1.8 MarC family NAAT transporter compare
ABIE51_RS10840 +0.4 1.0 ferritin-like domain-containing protein compare
ABIE51_RS16190 +0.4 2.5 homoserine O-succinyltransferase compare
ABIE51_RS10715 +0.4 0.9 hypothetical protein compare
ABIE51_RS07440 +0.4 2.5 Gfo/Idh/MocA family oxidoreductase compare
ABIE51_RS02050 +0.4 2.8 YcgL domain-containing protein compare
ABIE51_RS04975 +0.4 2.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE51_RS05590 +0.4 1.8 hypothetical protein compare
ABIE51_RS07465 +0.4 1.0 hypothetical protein compare
ABIE51_RS03335 +0.4 0.7 hypothetical protein compare
ABIE51_RS01080 +0.4 1.4 DUF938 domain-containing protein compare
ABIE51_RS14590 +0.4 1.8 response regulator transcription factor compare
ABIE51_RS10345 +0.4 1.0 type 1 glutamine amidotransferase domain-containing protein compare
ABIE51_RS14855 +0.4 2.1 YciI family protein compare
ABIE51_RS06600 +0.4 2.9 rhomboid family intramembrane serine protease compare
ABIE51_RS06625 +0.4 2.1 thioredoxin family protein compare
ABIE51_RS13255 +0.4 2.6 hypothetical protein compare
ABIE51_RS18475 +0.4 1.6 HAD family phosphatase compare
ABIE51_RS08840 +0.4 1.8 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS16460 +0.4 2.2 hypothetical protein compare
ABIE51_RS07695 +0.4 0.9 hypothetical protein compare
ABIE51_RS12590 +0.4 1.7 cytochrome c compare
ABIE51_RS06950 +0.4 3.1 RNA polymerase sigma factor compare
ABIE51_RS05170 +0.4 3.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE51_RS13710 +0.4 2.7 dicarboxylate/amino acid:cation symporter compare
ABIE51_RS10690 +0.4 1.2 NAD(P)-binding oxidoreductase compare
ABIE51_RS16370 +0.4 0.4 hypothetical protein compare
ABIE51_RS14165 +0.4 1.4 tRNA-Leu compare
ABIE51_RS09995 +0.4 1.3 pseudouridine synthase compare
ABIE51_RS05575 +0.4 0.6 helix-turn-helix transcriptional regulator compare
ABIE51_RS15900 +0.4 1.4 DUF3108 domain-containing protein compare
ABIE51_RS07145 +0.4 0.7 helix-turn-helix transcriptional regulator compare
ABIE51_RS11885 +0.4 1.4 polyphosphate kinase 2 compare
ABIE51_RS10235 +0.4 0.7 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE51_RS11315 +0.4 1.2 NADPH-dependent FMN reductase compare
ABIE51_RS01225 +0.4 1.7 GNAT family N-acetyltransferase compare
ABIE51_RS07415 +0.4 1.3 histidine phosphatase family protein compare
ABIE51_RS18465 +0.4 1.9 YajQ family cyclic di-GMP-binding protein compare
ABIE51_RS00215 +0.4 1.0 pseudouridine synthase compare
ABIE51_RS07790 +0.4 1.9 CinA family protein compare
ABIE51_RS15165 +0.4 2.6 LEA type 2 family protein compare
ABIE51_RS09665 +0.4 0.7 MFS transporter compare
ABIE51_RS03960 +0.4 0.5 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA compare
ABIE51_RS07905 +0.4 0.8 polysaccharide deacetylase family protein compare
ABIE51_RS06310 +0.4 1.7 hypothetical protein compare
ABIE51_RS17500 +0.3 3.0 helix-turn-helix domain-containing protein compare
ABIE51_RS10885 +0.3 0.9 MarC family NAAT transporter compare
ABIE51_RS04570 +0.3 0.8 general secretion pathway protein GspN compare
ABIE51_RS06770 +0.3 0.8 hypothetical protein compare
ABIE51_RS09930 +0.3 0.9 iron uptake protein compare
ABIE51_RS17505 +0.3 3.1 winged helix-turn-helix domain-containing protein compare
ABIE51_RS00165 +0.3 1.3 hypothetical protein compare
ABIE51_RS13060 +0.3 1.3 hypothetical protein compare
ABIE51_RS15465 +0.3 0.9 ABC-F family ATP-binding cassette domain-containing protein compare
ABIE51_RS17430 +0.3 1.0 NAD(P)-dependent oxidoreductase compare
ABIE51_RS09950 +0.3 0.9 hypothetical protein compare
ABIE51_RS06590 +0.3 1.3 hypothetical protein compare
ABIE51_RS01645 +0.3 1.2 MmcQ/YjbR family DNA-binding protein compare
ABIE51_RS08555 +0.3 1.0 PspC domain-containing protein compare
ABIE51_RS14480 +0.3 2.1 hypothetical protein compare
ABIE51_RS02110 +0.3 1.8 DUF1203 domain-containing protein compare
ABIE51_RS06545 +0.3 1.0 ribosome rescue GTPase HflX compare
ABIE51_RS17445 +0.3 1.4 LON peptidase substrate-binding domain-containing protein compare
ABIE51_RS16665 +0.3 1.9 chemotaxis protein compare
ABIE51_RS00965 +0.3 2.0 aspartate/glutamate racemase family protein compare
ABIE51_RS07410 +0.3 1.2 polysaccharide pyruvyl transferase family protein compare
ABIE51_RS15785 +0.3 1.2 FAD:protein FMN transferase compare
ABIE51_RS05610 +0.3 2.1 M12 family metallo-peptidase compare
ABIE51_RS16910 +0.3 0.5 response regulator compare
ABIE51_RS14225 +0.3 2.2 phosphate regulon sensor histidine kinase PhoR compare
ABIE51_RS18555 +0.3 1.1 cysteine hydrolase family protein compare
ABIE51_RS07895 +0.3 0.9 glycosyltransferase family 4 protein compare
ABIE51_RS18755 +0.3 1.2 hypothetical protein compare
ABIE51_RS06685 +0.3 2.6 DUF885 family protein compare
ABIE51_RS14280 +0.3 1.8 two-component system response regulator CreB compare
ABIE51_RS04255 +0.3 1.1 PilT/PilU family type 4a pilus ATPase compare
ABIE51_RS00290 +0.3 0.9 M20 family metallopeptidase compare
ABIE51_RS15235 +0.3 1.2 MerR family transcriptional regulator compare
ABIE51_RS00705 +0.3 2.5 ferredoxin--NADP reductase compare
ABIE51_RS08165 +0.3 0.5 DUF4010 domain-containing protein compare
ABIE51_RS16640 +0.3 1.3 hypothetical protein compare
ABIE51_RS11005 +0.3 0.6 AraC family transcriptional regulator compare
ABIE51_RS12845 +0.3 1.3 YdcF family protein compare
ABIE51_RS17100 +0.3 1.1 OmpW family outer membrane protein compare
ABIE51_RS04000 +0.3 1.0 CsbD family protein compare
ABIE51_RS07980 +0.3 2.2 PhoH family protein compare
ABIE51_RS11595 +0.3 1.4 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS15000 +0.3 1.8 Cache 3/Cache 2 fusion domain-containing protein compare
ABIE51_RS10960 +0.3 1.7 tetratricopeptide repeat protein compare
ABIE51_RS07580 +0.3 1.2 CoA pyrophosphatase compare
ABIE51_RS02585 +0.3 1.1 SDR family oxidoreductase compare
ABIE51_RS15635 +0.3 1.1 hypothetical protein compare
ABIE51_RS02055 +0.3 1.4 ankyrin repeat domain-containing protein compare
ABIE51_RS08130 +0.3 1.1 5-oxoprolinase subunit PxpA compare
ABIE51_RS05545 +0.3 1.1 RNA polymerase sigma factor compare
ABIE51_RS13065 +0.3 1.0 hypothetical protein compare
ABIE51_RS10165 +0.3 1.1 SapC family protein compare
ABIE51_RS16800 +0.3 1.0 flagellar export protein FliJ compare
ABIE51_RS02170 +0.3 1.8 MATE family efflux transporter compare
ABIE51_RS16965 +0.3 0.7 methyl-accepting chemotaxis protein compare
ABIE51_RS05510 +0.3 1.0 NUDIX hydrolase compare
ABIE51_RS01035 +0.3 0.7 phytochelatin synthase family protein compare
ABIE51_RS02530 +0.3 0.9 FAD-dependent oxidoreductase compare
ABIE51_RS05260 +0.3 1.1 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABIE51_RS17840 +0.3 1.0 (2Fe-2S)-binding protein compare
ABIE51_RS16310 +0.3 2.1 2OG-Fe(II) oxygenase compare
ABIE51_RS15850 +0.3 1.9 LysR family transcriptional regulator compare
ABIE51_RS14740 +0.3 1.0 DUF6289 family protein compare
ABIE51_RS04985 +0.3 1.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE51_RS19080 +0.3 1.2 PH domain-containing protein compare
ABIE51_RS08520 +0.3 0.3 response regulator transcription factor compare
ABIE51_RS16565 +0.3 1.4 hypothetical protein compare
ABIE51_RS09965 +0.3 0.7 AraC family transcriptional regulator compare
ABIE51_RS02675 +0.3 1.1 LysR substrate-binding domain-containing protein compare
ABIE51_RS10220 +0.3 1.3 SDR family oxidoreductase compare
ABIE51_RS10650 +0.3 1.1 HlyD family secretion protein compare
ABIE51_RS00135 +0.3 1.5 phosphotransferase compare
ABIE51_RS07840 +0.3 0.9 4'-phosphopantetheinyl transferase superfamily protein compare
ABIE51_RS17555 +0.3 0.3 ACT domain-containing protein compare
ABIE51_RS03905 +0.3 1.7 HAD family hydrolase compare
ABIE51_RS12755 +0.3 1.5 glutathione S-transferase family protein compare
ABIE51_RS14370 +0.3 0.6 hypothetical protein compare
ABIE51_RS18635 +0.3 1.7 bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase compare
ABIE51_RS06070 +0.3 0.4 fructosamine kinase family protein compare
ABIE51_RS17905 +0.3 1.1 transporter compare
ABIE51_RS01165 +0.3 1.9 multidrug resistance efflux transporter family protein compare
ABIE51_RS18120 +0.3 1.6 hypothetical protein compare
ABIE51_RS02695 +0.3 0.6 hypothetical protein compare
ABIE51_RS01295 +0.3 1.1 SprT family zinc-dependent metalloprotease compare
ABIE51_RS10545 +0.3 1.3 2-dehydro-3-deoxygalactonokinase compare
ABIE51_RS04060 +0.3 0.9 NUDIX domain-containing protein compare
ABIE51_RS12855 +0.3 1.7 glutathione S-transferase family protein compare
ABIE51_RS07875 +0.3 0.3 alpha/beta hydrolase compare
ABIE51_RS13675 +0.3 1.1 diaminopimelate decarboxylase compare
ABIE51_RS09005 +0.3 1.1 VOC family protein compare
ABIE51_RS14620 +0.3 1.9 hypothetical protein compare
ABIE51_RS03725 +0.3 1.2 flagellar motor protein MotB compare
ABIE51_RS09570 +0.3 1.3 CopL family metal-binding regulatory protein compare
ABIE51_RS17475 +0.3 1.0 hypothetical protein compare
ABIE51_RS17255 +0.2 1.0 YkvA family protein compare
ABIE51_RS12670 +0.2 1.5 3-hydroxyanthranilate 3,4-dioxygenase compare
ABIE51_RS05670 +0.2 1.7 PIG-L deacetylase family protein compare
ABIE51_RS05290 +0.2 1.7 DMT family protein compare
ABIE51_RS18715 +0.2 0.5 DUF2784 domain-containing protein compare
ABIE51_RS14600 +0.2 1.7 GNAT family N-acetyltransferase compare
ABIE51_RS10925 +0.2 1.1 FadR/GntR family transcriptional regulator compare
ABIE51_RS09640 +0.2 1.6 OmpA family protein compare
ABIE51_RS12860 +0.2 1.4 hypothetical protein compare
ABIE51_RS09680 +0.2 1.1 outer membrane protein OmpK compare
ABIE51_RS14390 +0.2 0.9 response regulator compare
ABIE51_RS00840 +0.2 1.7 ATP-binding protein compare
ABIE51_RS09685 +0.2 0.9 mechanosensitive ion channel family protein compare
ABIE51_RS03730 +0.2 0.8 hypothetical protein compare
ABIE51_RS01355 +0.2 0.6 superoxide dismutase family protein compare
ABIE51_RS05615 +0.2 1.0 proprotein convertase P-domain-containing protein compare
ABIE51_RS15790 +0.2 1.4 sulfite reductase flavoprotein subunit alpha compare
ABIE51_RS03705 +0.2 1.4 MFS transporter compare
ABIE51_RS04685 +0.2 1.4 YraN family protein compare
ABIE51_RS01935 +0.2 1.3 glycosyltransferase family 2 protein compare
ABIE51_RS13785 +0.2 1.0 ABC transporter transmembrane domain-containing protein compare
ABIE51_RS13040 +0.2 1.0 hypothetical protein compare
ABIE51_RS10530 +0.2 1.3 dihydrodipicolinate synthase family protein compare
ABIE51_RS06780 +0.2 1.7 Maf family nucleotide pyrophosphatase compare
ABIE51_RS17560 +0.2 1.1 aminotransferase class IV compare
ABIE51_RS10640 +0.2 1.2 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein compare
ABIE51_RS13525 +0.2 1.4 acetoacetyl-CoA reductase compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in agar plate interaction experiments